Ayam004377.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- -
- Assembly
- None
- Location
- AY:1335-11479[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 1.5e-05 0.00073 19.6 1.7 2 23 38 59 37 59 0.97 2 24 0.00022 0.01 16.0 2.0 2 23 95 117 95 117 0.97 3 24 8.9e-05 0.0042 17.2 1.9 1 23 167 190 167 190 0.96 4 24 0.00032 0.015 15.5 0.1 1 23 254 276 254 276 0.97 5 24 0.0041 0.19 12.0 5.2 2 23 288 309 287 309 0.96 6 24 0.045 2.1 8.7 1.5 2 23 321 342 320 342 0.96 7 24 0.0042 0.2 11.9 1.1 1 23 352 374 352 374 0.98 8 24 0.0004 0.019 15.1 2.2 1 23 402 424 402 424 0.96 9 24 4.8e-05 0.0023 18.0 1.6 1 23 435 457 435 457 0.98 10 24 0.00016 0.0075 16.4 3.8 1 23 465 487 465 487 0.99 11 24 0.00016 0.0077 16.4 0.2 2 23 507 529 506 529 0.97 12 24 1.8 86 3.6 1.5 1 23 547 569 547 569 0.93 13 24 1.1 53 4.3 1.7 1 14 576 589 576 596 0.84 14 24 0.0023 0.11 12.7 1.1 2 23 609 631 608 631 0.95 15 24 0.0042 0.2 11.9 0.2 2 23 654 675 653 675 0.95 16 24 5.6 2.7e+02 2.1 6.3 2 23 718 740 717 740 0.94 17 24 0.0027 0.13 12.5 1.0 1 23 755 777 755 777 0.96 18 24 0.073 3.4 8.0 1.9 5 23 787 805 784 805 0.93 19 24 0.011 0.51 10.6 1.1 2 23 816 838 815 838 0.94 20 24 0.28 13 6.2 1.7 2 23 855 873 855 873 0.87 21 24 5.3 2.5e+02 2.2 1.6 2 23 918 939 918 939 0.94 22 24 0.12 5.4 7.4 0.5 2 23 946 967 945 967 0.94 23 24 0.0003 0.014 15.5 0.6 2 23 978 1000 977 1000 0.96 24 24 0.95 45 4.5 3.1 2 20 1038 1056 1037 1058 0.93
Sequence Information
- Coding Sequence
- ATGGTCAGGTCAGCCAGTTGGTGTATAAATGTCTTGTTAAAATATTTCAGAGGTAGTCCAATAGAAGAGATGGTACTTAACACTTCAGCTCAGAGCACGCCCGGTATCCTGAAGTGTAATATCTGCGACAAGCAGTTCACCTACAAGAAAGCCTTACTGACCCATCAGCTGAAACATACTGAAACAGATGTGAAAACTGAGCCACTGGAAAAAGACACGAGTTTGCTCAATGAGTCATACAAGGAATCTGAATCGGAGTCAAGCGTTGAGGGTGATGACAACACGTGTGATATATGCGAAAAGCAGTTCTCTTATAAACGTCTACTGGTGCAGCACAAAAGGACCAAACACAACATGTGCTCTGGTACTAAGAGGTCAAAGATAACTCTGAAGGACTGTCCGGTGAGGTGTCTCATATGCGATGTGGAAATGAAAGTGAGCAATATAAATGAGCACAATCAGAAACACATCGCTTTAAATATGAAGCCGAGAAACATTTACACTTGTAAAGAGTGCGGGAATAATTTCAAGAGTTGCAGCGCTTTAGCTAATCATATAAAGTTTATTCACAGGTTGAAACAGCCGATACCAAATGAAACTAAGGCCAAAGACATAAGCACACCGGACTTGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTGGTGAGGTTCCGATTGAGAATCATAACGGGGAGGACAAACTAGTGGTGGATATGGCAGGGTTCACTTGCCCCATATGTGGGAAGAAAATGCCCACGCTTATATCCCTCAAGCGGCACGTGAACTGGCATACGAACGTTGGGAAGAATATCCAGAAGATTATAGAATGTTTCGTCTGCAAGGAAACATTTAGATTCCAATGTCACTACAAAATCCACATGCGAGAACACTACCGGGACAAGAACCTGGATCCGAAGATTCTGACTTGCTCCATCTGCAACCGGAAGAGTAAGCACCTGCGCGCCGCCATGGCGCACATGAACTACCACAAGCAGACGCGTTTCCAGAACAAGGACTACCAGTGCTCCATCTGCAAACGGGTTTTCCAATTCAGAAAAGTGTACCTATCACATATGGCAATCCATTACAAGAGGGGAGATAGCATCCAGAACACAGTGGTAGCCTGCGGCGGTGCCAGTGCTGAGAATAGCACTACAGACGGTACATATTCATGTGACATTTGCGGTAAAGTGTGCGATTCTGAGAACTCTTTAAAACACCACAAAATATGGCACAAGTCTAAAACGTCCCTATACGGTGCGAGACACGAGTGTGACATCTGCAGCCTCCAGTTCACAAACAAAAAATGGTTAGAAGTTCACACGAGGACACATTACGAAGACGATAACGGCCCATTCAAGTGCAATATATGCCACAAAGGGTTCACGTCTGAGGTGTACCAGCGCAAGCATATCAAGTCTCATAATTTCGATCATGTGTCACATAAAAAACGTATCGAGAAACTCCGGAAAGATAAAGTGAAATGTCCTATATGCAACCGTTATTATCCTGATCTTGTGAAACTTATTCGGCATCTGAGAAGGACTCATCCGGAAAGCAAAATGATCAAAGAGGATCCAGACGCGCCTCCACCGAAGTACTACGCTTGTAAATTGTGCGCAAAGGTGTTCCTCGATGAGAAAAGATTCCAACACCACGAAGAATCCCATCTCAGGAAGCCAGAGTTCTTCAAATGCAAGTTCTGCGGCAAGAAAACGATCTCTCTAAAGAACCATAGATTCCATATTAAATGTCATTTGACAACGAAACACACTGACAATCCTCTGAAATGTCCACAATGTGAAGAGGTGTTTGTGAAAGGTTATGATCTGCATCACCACTTGCGCGATGTGCACGACATCAATGAGACTTGGATAGCGGAGAGGACTGAACAGGTCCTAAATGGACCACTTAAAGACTTGCAGTGCTCCGTTTGCCTCAAAATCCTGGCAAGCAAGGGCAACTTTCAGCGTCACATTGACTACCATAATTCTCTAAGGTGTAACTACTGCTTCGATTATTTTAGCGCTTTGAGATTTTTGGAAGGACACTTGGGATTTGCCTGTGAGAAAAAACAATTAGTGGGCAACACAGAAATATATCCGAAGAAATTGAAATGTCACATCTGCTACAAAGCTTTCCATCTGCAAGTGAAGTTAGATTGTCATCTGCGAACGCAGCACGACATAAGAGTGTGTAGGGAAGCGATGTCAGAGAAAAAAGAATACGTGTGCGATTATTGCTTCAAATTATTTGAAAACGAATATGCACTTACAACACATAAGATATATCACAGAACTGTTGGTTACTACGGTTGCATTTACTGCAAAAAGAAATTCAATACGTTAACACTTTATAGGAAACATAAGAACGCGCACTTCGCACAACTCAACGTCGACAATCCTACGAAATGCGAACATTGCGATGAGACGTTTGTCGCTTTCAGGGAATTTATTTATCATATGAAGGACGTCCATGGCGACGACAAGGAGTGGGTGGTTATGCCAAAAGATGTTACTGAGGAAACTTGTCCCATTTGTAATAAAGTATTCCTCAATTTACACAGACATCTAGACTACCACGAAGAGAATAAATGTAAAAAGTGCGGCGAATATTTCTACTCTACCATTGAGTGCGACAACCATCTGTGCGCGATCGAGAGCGACGATGAAGTAACCGTGAACTGTGACAACCAAAATATACAGAAATACGAGGAATGTTCCTTCTGCTTCAAACCTATAACGAGAAAGAATTCGAGACGACTGCACAATCAAATACACAAGGGCTCAGGATCGATATCCTGTCGTTTCTGTCCACTTAAATTTAAAACTATGGACGCCTTCAACATTCACGCTTTCTCACACCGAAGTAGAAAGTACAACAAGAGACCGATAAAATGCAGAAAATGCGGCGAAAAGTTCGTACAGTACGGACCGTTCATGAGACATATGAAATCGGTTCATAAGTCTACGAAGAAAGTTCACTACAGAGCTACGGTGAAGCCTGAGAAGTGTCTGGTCTGTGGCGACGAATTCCCAAACCTTCACAACCACTACCGAGCACATTTGTTAAATCAGTGCCAACTTTGCCGAAAATATTTCACATCTTACAAGCTTTTTTCGAACCACGAGTGCGATAAGGAGGATGCTGATCCCACCAAAGTGTTTACTAGTGATGAAAATTTAACATTACTCATCAACACCTACGTACCTACAGACGAGAAAGACGATGAGAAATTTTATGGGCATAGTGATGAAGAAGACGAGGTCATTCCGTCTGCAACACAATCGCAACAGGAAGAGGATAATGACAAGAAATTTCTTCACAATTTAGTTCAATCACCAATTATATCCGATGTATCGTCGTTGTTTCACAAGGAGGAAGTACAAAGCCAGGACGGAGATAATAATAGTCAAGATGGTGACTGTGTCAGTCAGAATAGTGAAGTGGATGTGGTGAATCTGAGTGATGATAACTCGATGGATATTAGTGAAGAAATCCCTATCGTTGTAATTGATGATGATTAG
- Protein Sequence
- MVRSASWCINVLLKYFRGSPIEEMVLNTSAQSTPGILKCNICDKQFTYKKALLTHQLKHTETDVKTEPLEKDTSLLNESYKESESESSVEGDDNTCDICEKQFSYKRLLVQHKRTKHNMCSGTKRSKITLKDCPVRCLICDVEMKVSNINEHNQKHIALNMKPRNIYTCKECGNNFKSCSALANHIKFIHRLKQPIPNETKAKDISTPDLADFCEVVVTKAEPLDWIQSHNDFGEVPIENHNGEDKLVVDMAGFTCPICGKKMPTLISLKRHVNWHTNVGKNIQKIIECFVCKETFRFQCHYKIHMREHYRDKNLDPKILTCSICNRKSKHLRAAMAHMNYHKQTRFQNKDYQCSICKRVFQFRKVYLSHMAIHYKRGDSIQNTVVACGGASAENSTTDGTYSCDICGKVCDSENSLKHHKIWHKSKTSLYGARHECDICSLQFTNKKWLEVHTRTHYEDDNGPFKCNICHKGFTSEVYQRKHIKSHNFDHVSHKKRIEKLRKDKVKCPICNRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPKYYACKLCAKVFLDEKRFQHHEESHLRKPEFFKCKFCGKKTISLKNHRFHIKCHLTTKHTDNPLKCPQCEEVFVKGYDLHHHLRDVHDINETWIAERTEQVLNGPLKDLQCSVCLKILASKGNFQRHIDYHNSLRCNYCFDYFSALRFLEGHLGFACEKKQLVGNTEIYPKKLKCHICYKAFHLQVKLDCHLRTQHDIRVCREAMSEKKEYVCDYCFKLFENEYALTTHKIYHRTVGYYGCIYCKKKFNTLTLYRKHKNAHFAQLNVDNPTKCEHCDETFVAFREFIYHMKDVHGDDKEWVVMPKDVTEETCPICNKVFLNLHRHLDYHEENKCKKCGEYFYSTIECDNHLCAIESDDEVTVNCDNQNIQKYEECSFCFKPITRKNSRRLHNQIHKGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKRPIKCRKCGEKFVQYGPFMRHMKSVHKSTKKVHYRATVKPEKCLVCGDEFPNLHNHYRAHLLNQCQLCRKYFTSYKLFSNHECDKEDADPTKVFTSDENLTLLINTYVPTDEKDDEKFYGHSDEEDEVIPSATQSQQEEDNDKKFLHNLVQSPIISDVSSLFHKEEVQSQDGDNNSQDGDCVSQNSEVDVVNLSDDNSMDISEEIPIVVIDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -