Ayam000334.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- -
- Assembly
- None
- Location
- AY:70786-76382[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.3e-05 0.0016 18.5 1.4 1 23 41 64 41 64 0.96 2 13 5e-07 2.4e-05 24.3 0.5 2 23 70 92 69 92 0.97 3 13 0.0021 0.097 12.9 1.7 6 23 157 175 155 175 0.95 4 13 2.5e-06 0.00012 22.1 0.6 1 23 187 210 187 210 0.96 5 13 2.1 98 3.4 0.1 5 16 220 231 218 233 0.87 6 13 3.3e-05 0.0016 18.5 1.4 1 23 246 269 246 269 0.96 7 13 5e-07 2.4e-05 24.3 0.5 2 23 275 297 274 297 0.97 8 13 0.0021 0.097 12.9 1.7 6 23 362 380 360 380 0.95 9 13 2.5e-06 0.00012 22.1 0.6 1 23 392 415 392 415 0.96 10 13 0.0034 0.16 12.2 0.9 5 23 425 444 423 444 0.94 11 13 4.7e-06 0.00022 21.2 1.4 1 23 456 479 456 479 0.97 12 13 0.0039 0.18 12.0 0.4 6 20 490 504 488 506 0.91 13 13 0.084 3.9 7.8 0.1 5 23 524 543 522 543 0.93
Sequence Information
- Coding Sequence
- ATGACAGACGATACATTAGTAATTCTATTTTATTTTTGCAGTTGTAATTTGTTACAAAACAGTTACAAACACGTTAAAATTGAAATAAACGCACCAGTGGATAATGGAATTACTGAATTACATCAGTGCCAATATTGTGGCAAGGGATTTGATAATTACAAAAATATGCTTGTACACATCAATAACGAACATAAACAAGAAAAATCCAAGTGTGACATATGTGACAAACAATTCAAGAGAATTGGAAATTTAAATCGTCACATTTTGACTGTCCATACACTTGACAAACCACCAGAACCTATAACTGGAAATTGTATGAATTCTCATGTAGATTTTCAACACAAATGCCTGCAGAATGACAATTTAAAGCTGTCTTGCTCTAGTAAAGAGGATGGAGAAGATGAGAGTGAAAATAAAGTAACAAGAAATATAACGAATTATGACTATGGAACGGTGTTCGAATGTCGTTGCGGGAAACAGTTTCGATCACCGATACACTTACGCGAGCATCAAAAGCTCATACACATACCTAAGATTCCGAAAACAAAAAATAAGAGATTCCAATGCGATTATTGCAAAAAGTCCTTTACAGTCAAATGGAGTTTAGCTACACATATAAAGGGCGTGCATTTTGATTATGGGAGGAAGTTTAAATGTTGGTGCGGGAAAGAGTTTCGTTCACCGTTACACTTACANGAAATAAACGCACCAGTGGATAATGGAATTACTGAATTACATCAGTGCCAATATTGTGGCAAGGGATTTGATAATTACAAAAATATGCTTGTACACATCAATAACGAACATAAACAAGAAAAATCCAAGTGTGACATATGTGACAAACAATTCAAGAGAATTGGAAATTTAAATCGTCACATTTTGACTGTCCATACACTTGACAAACCACCAGAACCTATAACTGGAAATTGTATGAATTCTCATGTAGATTTTCAACACAAATGCCTGCAGAATGACAATTTAAAGCTGTCTTGCTCTAGTAAAGAGGATGGAGAAGATGAGAGTGAAAATAAAGTAACAAGAAATATAACGAATTATGACTATGGAACGGTGTTCGAATGTCGTTGCGGGAAACAGTTTCGATCACCGATACACTTACGCGAGCATCAAAAGCTCATACACATACCTAAGATTCCGAAAACAAAAAATAAGAGATTCCAATGCGATTATTGCAAAAAGTCCTTTACAGTCAAATGGAGTTTAGCTACACATATAAAGGGCGTGCATTTTGATTATGGGAGGAAGTTTAAATGTTGGTGCGGGAAAGAGTTTCGTTCACCGTTACACTTACAAAGTCACGAGAGGCTCGTTCACAAGCACAGTGTTCAAAATACTACTAATGACAAATTCCAATGCGATTATTGCAAGACTTTTTTCACAACTAAATCGAATGTAATGATACATATACAGAGTGTCCATTATGATTATGGGAAACGGTTCGATTGTTTGTGCGGGAAACAGTTTCGTTCACCGATACACTTACGCAGACACGAGATGTACAAACGCCGGCGCAATGTTCAAAATACTAATCATATATCAAATAGTAATCAAGTATGCGAAAAACAATTCAAAAGTGTTGAAAATTTAAATGGTCACACTTCGGTTTTCCATAAACTTGACAAACCACCTATAACTGAAAATTGTGTGAATTGTCATGTGGCTTTANATCCACCTGCGCGATGTTGA
- Protein Sequence
- MTDDTLVILFYFCSCNLLQNSYKHVKIEINAPVDNGITELHQCQYCGKGFDNYKNMLVHINNEHKQEKSKCDICDKQFKRIGNLNRHILTVHTLDKPPEPITGNCMNSHVDFQHKCLQNDNLKLSCSSKEDGEDESENKVTRNITNYDYGTVFECRCGKQFRSPIHLREHQKLIHIPKIPKTKNKRFQCDYCKKSFTVKWSLATHIKGVHFDYGRKFKCWCGKEFRSPLHLXEINAPVDNGITELHQCQYCGKGFDNYKNMLVHINNEHKQEKSKCDICDKQFKRIGNLNRHILTVHTLDKPPEPITGNCMNSHVDFQHKCLQNDNLKLSCSSKEDGEDESENKVTRNITNYDYGTVFECRCGKQFRSPIHLREHQKLIHIPKIPKTKNKRFQCDYCKKSFTVKWSLATHIKGVHFDYGRKFKCWCGKEFRSPLHLQSHERLVHKHSVQNTTNDKFQCDYCKTFFTTKSNVMIHIQSVHYDYGKRFDCLCGKQFRSPIHLRRHEMYKRRRNVQNTNHISNSNQVCEKQFKSVENLNGHTSVFHKLDKPPITENCVNCHVALXPPARC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -