Ayam007134.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- -
- Assembly
- None
- Location
- AY:134669-181993[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.00039 0.018 15.2 1.0 1 23 248 271 248 271 0.96 2 21 4.9e-05 0.0023 18.0 0.7 2 23 279 300 279 300 0.97 3 21 0.018 0.84 9.9 2.7 1 23 331 354 331 354 0.97 4 21 1.1 54 4.3 0.1 3 23 361 382 361 382 0.95 5 21 0.018 0.86 9.9 1.2 2 20 392 410 391 412 0.92 6 21 0.0032 0.15 12.3 0.7 2 23 423 445 422 445 0.95 7 21 0.00038 0.018 15.2 0.5 1 23 454 477 454 477 0.97 8 21 0.0026 0.12 12.6 2.1 3 23 490 510 488 510 0.97 9 21 7.5e-06 0.00036 20.6 1.1 1 23 516 538 516 538 0.98 10 21 0.00022 0.01 16.0 0.4 1 20 544 563 544 565 0.94 11 21 7.4e-05 0.0035 17.4 0.8 1 23 886 909 886 909 0.96 12 21 0.004 0.19 12.0 1.4 2 23 917 938 916 938 0.97 13 21 0.78 37 4.8 2.6 1 23 942 964 942 964 0.97 14 21 0.00012 0.0054 16.8 3.2 1 23 969 991 969 992 0.95 15 21 1 49 4.4 0.1 3 23 999 1020 999 1020 0.95 16 21 6.7 3.2e+02 1.8 2.9 3 20 1031 1048 1029 1050 0.85 17 21 0.0016 0.075 13.2 0.1 3 23 1058 1079 1056 1079 0.93 18 21 0.00012 0.0059 16.7 2.2 1 23 1086 1109 1086 1109 0.98 19 21 0.003 0.14 12.4 1.2 2 23 1123 1144 1122 1144 0.96 20 21 4e-07 1.9e-05 24.6 1.0 1 23 1150 1172 1150 1172 0.99 21 21 2e-05 0.00094 19.2 0.1 1 23 1178 1200 1178 1200 0.97
Sequence Information
- Coding Sequence
- ATGGAAAATGAAATTATTACTTCGTCTTTGCCATGTCAGGGATGCTTGAGTGAATCAAAACTGAACACAAATAATCGCCGCATTGTAGAACTCTACAAACTTCTTGTTTACCCAGAGATAATGTTAAAGGAGGATGTACATTTGTGCCACATCTGCTGTGCCCTTCTCAATAAGTATGGAGTCTTCAGAGAGAGATGTCTGCAAGCTAGAGATATTCTTCAAAATACCACTAAATATGAACGGATAAATATATCATCACTTCATTATTATAGTCAAACAAAAGTGAACATAATCAATTATCCTGATACTGAATGGATCGAAGAAGTCACAACCCATAATGAGAAATCAGAAAAACTGAATGATTATACTGCAATCGAAATCACGAATTCACTGGTAGAAATTAGCGAAGTTAAACTGGAGAATGATGTGTCGATCAAAGATGAAGATTCTGATATTCACACTGAAGAACTATTCCTAATGGATGTTAATGTCAACGAAGAAATAAATGTGAAAGAAGAAAATGTTAGAAAAGTAAAGAAAAGATCAAAGAAAATAAAAAGAATGGAAGCAGTAGAACTAGATGTAGAAGAAAGGCCAAAGTTTAAGCAAAAGGGGAAATATTTTGAGACGAAAGACAATATAGCGAATTTTGAGCGATTGTATGATGTAAATGTTATAGTTTTAAGCAGAGAACAGCAAATTAAAGATATATCTGAGAGGAAGAACGGTTTCGATTACCCATATAGGTGTGGTGATTGTTTGAAGGGTTTCATGGATGAACATAACTTAGAGAAGCATCGCAAAGCGCTTCATGATCCTAGCCGAGGTGATGCAGTATGTGAAATATGTAAAGTTAGATACAGCGACAGTAGAAGTTTGAATAGACATCTACGAAGCCATAGGTTAAAGTTTGCCTGCAGGCAGTGCAAACATATCAGTAGGAACACATGTAAAGCTGTGGAACATTATAAGATGCATGTCGGGAAACTTTACAAATGCGACCACTGTGGCAAGGAATATCTGAAACTGACGACATATTTAACTCACATAAGGATCAGGCACCCTTCAGAGTTGATCTGGTGCGATGTGTGCGGTGACTCTTCCATATCGAAAGTCGGTTTAAACGCCCATAAGAATTTAGCACATAAAGAGTTAAAGCTCCCACCGGATTGTAAGTGTGGTGATTGTGGTGCGATGTTCGCTCACACACGCGCTTTGATCCACCACAAGACCGTGTTTAGCGATTTGTCGTGCGACAAGTCGAGCTCGTGTCTCCACTGCGGCGAAGGTTTCCCCACGAGCCTACTCCTCAAGGATCATTTATTGAAGACGCACAGGAAAACCGGTAGCAAGGCTTTATACCCTTGTGCTAAGTGTGATAAAGTATTTCCGAAGTACAATCTATACAGCGCCCATTATCGCAGGATTCACATCGACAAGGACAAAGTTAACTTGAAGACCATTATATGTGAACTCTGTGGGAAATCCATGAGAAACACGTGTGAGCTGCGTTACCACCAGCGCACGCACACCGGGGAGAAGCCATTCCATTGCCCTGAATGCCCGAAGACGTTCATCAAGCGCGCCCTCATGATGACACATATGAGAGTGCACTCGAACGAGCGGCCGTTCGTTTGCAAACACTGCCCGAAGACGTTCAAAGGACCGGCAGCGTTGCGGGGACACCAATATAAGATTACTGAAAACAGTTGGATCATCTATGCGGAACACACTAGTATACTGACTTGCGTTTGTGGTAATGACGTCACACGCGAACAGTTACGTGGCACTTATATAATAACTATTCATGAAGAATGTAATGCATCCATAGGCGGGTTGCAAATCCATGCACAACGCTACCATTCACTGAGTACAGCATATGAGCACATACCTGTAATCAATCTACCCAGTTTCAAAGAAAAAGAGCGACGCTTCATCGTTGCAGGAGATGAACCCATAAACCTAAAAGGGGTCCCCCTGGACGACATACACCGTTTAAACTATATTTTGAAGAAAAGTGTTCAAAGTCAGTTATGTCATATGTGCAAAGCAATGCTTGTGAAGTTTGCAGCATTTAGAAGAATGTGCCAGAAATCCCGAAGTATTCTTCTAGGTGCAACAAATGATAATATCATGACATTGAAAGATATATCAAAACTATATACACTCAGAAACCCTACATATATAACAACAACAACAGACTTAACACAGTATCCAGAATCCGAAACAAATATAGCTGAAGTTCTTATCAAATCTACCCTTGTATATGAAGAATCGAAGATCAAACTTGAAGAACTTTCGTCTACTGAATCGGTGGGAAGTGATTTGAGCAATGGATTTATTGATACTACAGAACCAGCGTCGATTATAACAACAGACATAACCTCCAATGTTATCTCAAACATAACCACAAAAAAGAAAAACAATAGTATGAGGAAGAAGAAAGCAGTAAAAAGAGAAGTTATTAACAAAACTGACAAGATTTACAAAAGAGCACAACGCTTGGACCGTATTAAAGGAAAATATTTTGAAACTAAAGAAAATATGACAACCTTTGAGAGTTTATATGACGTCGAGGTTGTTATTCTGAGCAAAGAACAACAGATGAAGGATGTGCTGGAGAGGAAACTCAGTTACAATTATCAGAACGGACCGTTCAAATGTGACGATTGTTACAAAGGCTTTATAGATGAGGATAATTTTATAAAACATTACAAAGCTCAGCACGACCCGAGTCGTGGGAATATTGTATGCGAGTTTTGCCGGTTCAGATATAAGGATAAACGAGGGCTTAACCAACACTTGAAGAGTCACAGGTTGAAATTCGTCTGCAGACAGTGTAAATACGTGTCTCGGACCACATTCAATGCAAAGGAACACTTTAAGATGCACGGAGGTCAAATGCACGAGTGTGAAAAATGTGGGAAAGCCTACGAGAAACTGTCTACATACCTGACGCACATGCGTATCCACCACCCTGAGGAGTTGGTGTGGTGCGAGCTCTGCGGGGAACCGTTCATCGGCGATTTTGGCCTGAACGGTCACAAGAAGCGAGCCCATCGGGACTTAAAGTACCCACCGGAATGCGCGTGCGCACGTTGCGGTACGCGCTTCACGAACACGTGCGCGTACGATACGCACGTGCACGTGTCCTGTGAAGGGGTGTCGGCTTGTGCTCACTGCGGTCGCGGGTTCGAGTCCCCGGCCGGACTACGGGATCATCTCCTCGAAACCCATAGGACTGATAAGAAATACTATGAATGTTTTAAATGTAACAAGACGTTCGCGAGAGAATCACTATACAGTGCGCATTTTAGAAGGATGCACGTCGAAGCTACTAAGAGAAGCTACTCCTCCCAACCATGGATCTGTGAGGTCTGTGGGAAGACCCTACCGAACAAGTGCCGGCTGATGTACCACCAGCGGAACCACACCGGCGAGAAGCCGTACCAGTGCCCCGACTGTCCCAAGAGTTTTACGATGAGAAAACTGCTCAGGTCCCACACTCGCGTTCACTCGAGCGAAAGACCATACGCTTGTAAATACTGCCCGAAGACGTTCAAAGGTCCCTCTGCTCTGAAAGGACACGAAAACATCCACACGGGTGGTAGAACGAAGACATCGAGGTAA
- Protein Sequence
- MENEIITSSLPCQGCLSESKLNTNNRRIVELYKLLVYPEIMLKEDVHLCHICCALLNKYGVFRERCLQARDILQNTTKYERINISSLHYYSQTKVNIINYPDTEWIEEVTTHNEKSEKLNDYTAIEITNSLVEISEVKLENDVSIKDEDSDIHTEELFLMDVNVNEEINVKEENVRKVKKRSKKIKRMEAVELDVEERPKFKQKGKYFETKDNIANFERLYDVNVIVLSREQQIKDISERKNGFDYPYRCGDCLKGFMDEHNLEKHRKALHDPSRGDAVCEICKVRYSDSRSLNRHLRSHRLKFACRQCKHISRNTCKAVEHYKMHVGKLYKCDHCGKEYLKLTTYLTHIRIRHPSELIWCDVCGDSSISKVGLNAHKNLAHKELKLPPDCKCGDCGAMFAHTRALIHHKTVFSDLSCDKSSSCLHCGEGFPTSLLLKDHLLKTHRKTGSKALYPCAKCDKVFPKYNLYSAHYRRIHIDKDKVNLKTIICELCGKSMRNTCELRYHQRTHTGEKPFHCPECPKTFIKRALMMTHMRVHSNERPFVCKHCPKTFKGPAALRGHQYKITENSWIIYAEHTSILTCVCGNDVTREQLRGTYIITIHEECNASIGGLQIHAQRYHSLSTAYEHIPVINLPSFKEKERRFIVAGDEPINLKGVPLDDIHRLNYILKKSVQSQLCHMCKAMLVKFAAFRRMCQKSRSILLGATNDNIMTLKDISKLYTLRNPTYITTTTDLTQYPESETNIAEVLIKSTLVYEESKIKLEELSSTESVGSDLSNGFIDTTEPASIITTDITSNVISNITTKKKNNSMRKKKAVKREVINKTDKIYKRAQRLDRIKGKYFETKENMTTFESLYDVEVVILSKEQQMKDVLERKLSYNYQNGPFKCDDCYKGFIDEDNFIKHYKAQHDPSRGNIVCEFCRFRYKDKRGLNQHLKSHRLKFVCRQCKYVSRTTFNAKEHFKMHGGQMHECEKCGKAYEKLSTYLTHMRIHHPEELVWCELCGEPFIGDFGLNGHKKRAHRDLKYPPECACARCGTRFTNTCAYDTHVHVSCEGVSACAHCGRGFESPAGLRDHLLETHRTDKKYYECFKCNKTFARESLYSAHFRRMHVEATKRSYSSQPWICEVCGKTLPNKCRLMYHQRNHTGEKPYQCPDCPKSFTMRKLLRSHTRVHSSERPYACKYCPKTFKGPSALKGHENIHTGGRTKTSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -