Ayam010307.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- -
- Assembly
- None
- Location
- AY:881507-896361[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.004 0.19 12.0 1.1 3 23 206 227 205 227 0.96 2 23 0.25 12 6.4 0.3 1 22 611 632 611 632 0.95 3 23 4.8 2.3e+02 2.3 0.3 1 22 673 694 673 696 0.82 4 23 0.0012 0.059 13.6 1.7 3 21 707 725 707 726 0.96 5 23 1.5 69 3.9 0.1 2 20 734 752 733 756 0.88 6 23 0.0071 0.33 11.2 0.2 3 23 777 798 775 798 0.96 7 23 0.0038 0.18 12.1 2.7 1 23 804 827 804 827 0.96 8 23 0.09 4.2 7.7 0.0 1 23 853 876 853 876 0.90 9 23 0.0039 0.19 12.0 3.5 1 23 881 903 881 903 0.97 10 23 0.014 0.64 10.3 0.3 1 23 909 932 909 932 0.95 11 23 0.00075 0.035 14.3 1.3 1 23 945 967 945 967 0.98 12 23 0.00013 0.006 16.7 1.8 1 23 1016 1039 1016 1039 0.97 13 23 0.014 0.65 10.3 2.0 1 23 1098 1121 1098 1121 0.97 14 23 0.00067 0.032 14.4 2.0 2 23 1144 1166 1143 1166 0.95 15 23 0.028 1.3 9.3 0.1 2 23 1172 1194 1171 1194 0.94 16 23 0.0071 0.34 11.2 0.2 1 21 1238 1258 1238 1259 0.95 17 23 0.00088 0.042 14.1 0.6 1 23 1269 1291 1269 1291 0.93 18 23 8e-05 0.0038 17.3 0.3 2 23 1379 1401 1379 1401 0.93 19 23 2.4e-07 1.1e-05 25.3 1.4 3 23 1408 1428 1407 1428 0.98 20 23 0.013 0.62 10.4 1.1 1 23 1447 1469 1447 1470 0.93 21 23 0.1 4.8 7.6 0.0 1 23 1491 1513 1491 1513 0.98 22 23 0.02 0.93 9.8 0.6 1 23 1519 1542 1519 1542 0.95 23 23 0.00023 0.011 15.9 0.7 1 23 1550 1573 1550 1573 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGAACGTGTTTGTAGACTTTGCTTGTCATCTCGAAGTGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGATCCTCCCGTCCTCGCTTCGAAAATTAAGGATTGCGTGTCCATACAGATAACTGAAAATGACGACTTGCCGACAAATGTCTGCAGAAAATGTATGGACAATGTCAATAACTGGCATATATTCAAGAGTGTTTGTGAAAGGACACAAAACAAACTACAGTCTCTGATTAATAAAGATGGCAGCCAACTAGAAGAGGTGAAAATTAAAAGTGAGCCATTATCTGATGAGGCCTATGATGATGGAGTGGTTATTGATGGCTCATATCCTGATAGTGAGAATGCCAGTTCAAGTAAAGTTCAGCCAGAAGGGCCTCCAATCTTGGCTTCATTGGGGCTCACACCGAGAAGTGATAAGGGCCTCGAGAGCGACAAAGATGAAGAAGAAGATGAGGAGGATATAAATGATAACTCACACGCATTTACCAAAGTACCTAACATGCCAGAAGTTTCTATTACGGTTATGTGTCCCACAGGCGAGACCCTACATGCACGCCAAGGCATCCAACAACTCGCTTCCAAAGATTGCCTCGTTTGTGGTCGAACTTATAGATATTCACATAACGCTCGACGACACGAGTTAACAGCTCACAGTTTTGATAGATATACGAATAAAATAACTTCAAAGAAGTCACACATGCACATGCAACCTAAATTACGACCTAATCCTTTTAATCCGAAAGCACGTCTGATGCCCAATCCAATTAATCATAAAATGCAATTCATGCCTAAAAATGCCCCAACTAAAATTATTTCACAAAAAATTATAACCCCACCAAAACCTATACCAATTAAAACTGTAAAAACCCAACAGAATAATTTACCTTATCCATTACGAATTAAAGCACTTAAGGATTTACAAATAAAAAAGAAAGAACCACAAATTTTGAAGACTTTATTAACTTCAAAGCCGGAAGTTTTAGTTTCTGAACCTGAGATCTTAAATTCTGGACCGGAAAGTCCAGAAACATTAATATCTGAACCAGAAATAGCATCTTTTCAAGTGGAGGCTATCTTGTCTGAACCCGATCCAGACGCATATGACCACCATCAAGCCGATGATGAACATGATGGTGAAATGGATATTAATCAAAGTCAACAATATGACACGGTCGACATGGACTCTGATAATGAAATTGAAATAGCTCGACAACAAGGAAATGCATCAGAAGGTGATGATCAAAATGAAGAAGACAATGTTCACCATGATGATAACATGGAAGAAATACATAGTGATAATGATAAAGATCCCAATGACGAGAATGGAGACAGTCAAGACAATGTTGTTGTTGATGATGGTGCAGAAATCAAACTAGAAGATGAAACCAAAGAAGAAGAACAAGGTAATGAGAAAATACATGAAAACGAAGAACATGAGGGAAATCATGATGACAATGACGATGATGACGAAGAACTCCCGCCAATGGAATTGGCGCCGGTAGTTGAAATAAACGAAGACATGCAAACAAACTCTTATATTAGTGAGCCAAATGAAGAACAGGAAGAAGAAGAACTTGACGAAACAGCAGATCCTAATGAAACTGTAGATGAAGAGTCTCCGGACAAGGATCTTGACCCTGATAAACTATATGTGACTAAAACACAAAGAGATTTCATAGCAAAATATCGTGATATAATAGAGCAAATAAACACAAAACGCTGTTTATGTTGTGACAGGGAACATCCTCGGAGAAAGGCCGTAATACAGCATTTACAAAAAAATGGGCATAAAGTACCAAAACATACTTGTTATAATTGCGTTGTTACATTCGGACACATTGGAGCTCTGCTTAGTCATATGAGATCAAATTCTTGTACTGACCTTTGGAAAATAATTTACAATGAGAACGGTATAACTGAAGACTTAGTACTACGACATGAAGTTAAGAATAAGGTTCATTACAAAGATATTTTCAACGCTAGGTCATACGCTTGTAAGTTATGTCCAGCGAAGTTTCAATTGAAACAGTTTATAATGAAGCATGTGTTAGATGTACATGAGGACGGACAGTCCAGAGTGCCATTGGGATGTGTGCATTGTCGCGCCAGATTCAAAGATAAGAGTTTACTGAAGAGACATATTCGGAATGGGGAATGTACGGTTTACATTTCGTGCGATTTATGTGCAGAAAAGTTTACGAACATTCAAGATTTTAATGATCATGCTGTAGCCGTACACGCCGGCAATTTCGACCAATCGGATAACGCTAACAAATGTGTCGACGGACGTCCAACAGACTGCCCTCTGTGCGGGAAAAAGAACAGTAACTATCCGAATTTGGTTAAACATTTGAAAATGGTTCATAATGAGGAAAAACCTCACTACTGTCAACACTGCGATTCTAAATATGAGCAAGCCGCTGATCTAAACAAGCACATTTATACGGAACATTCGGATAGGTCTCTTGGCATGCAAAGAAGCGAACCTGATATATCGCTCGTCAAGGAAGAAGCGGAGGAATATCACTATTCATGTACGGAATGCAACGCCATATTTGAGACTGTTGATGCTTGGACCGACCATCAAGTGGCTGAGCATAATCAAGTAGCCCATCATTGTGATCAGTGTGACAAAAAATTCTTGAGACCGTCAGAGCTCGCTGAACATAAAAATACTCATTTGCGAGTTAAATTTTATCCATGCAGTGTTTGTTCTAATTCATACAGCACTCCGCAAAAGCTGTCTGAGCACGTTCAACAGTCTCACCCTGGCGCAGGCATTCAAACCGCTGCAGAATCAGAATTTTATTGTGACATATGCATTAGATCTTTCAAAAGTCGTCAGGCTTATTCAAATCATATGCGTATTCACGCGAAGGTGCCGACAACGAATAGAAAACCTGGAGATCCTAAAGGCTTTGCTCCGCAAATTATAGGGAAACCAATTAAGCAATTTTCTATGATGCAACCTGGTTTCGTTTCATTTAAACCAAGTTATAATGTGCCTAATGCTCCATATTCTTGCGATATTTGCGGTAAAGGGTTTATGCATAAAAAGAATATTTGGAAGCACAAGAAAGTATTACATGCTGACGTCATCGGTGACCGAAATGATAGCGAAGATAATACTATGCATGCTTCTACTGAAGAGGAAGAATTTAACATTGATGAAAATGGAGGCTTATCAACGCCTCAATTTAACAGTTTTAATTTTACCAATTTCACTAATAGCACACCACAGCCGCAAACGGAAACAATGCCATACTCTTGTGAACTGTGCTACCAAAGATTCCCATTACGAACTAGTCTGTGGAAACACAAACGTAACAAGCACGGCATCATAACTCCAAATACAGACTTCCAACCGCAGGGTGGCTTTGGTGACAATAGTAGTAGATCGAGTTGTACGATTTGTAAAATTTCGTTTAGCGACAAAAAATCCTATTACCGTCATAGAAAGAACGTGCATAAATCTTCGGTACAAATGTGTAAAATATGTGGTAAACCGCTTAGTTCAACGCTTGAGCTATATGAGCACTTAAAGGCGGCTCACGCACGTGAACTGCTAGGGTATAATGCTAACCAAGGCTCGAGTAAATCACAAGATACACAGCAAGATGTGGAAACGGAATACGAGAACGAACAAGAATCTGTCGATCCCAGCGTAGAATATCAAGCTAGATATCCATGCGACACATGCGGGAAACAGTTCGTTGGATTGTTGGCATTACAGAACCATCAATGTATAAACCAACAGCCATCACAACCTCAAACCTTTGACTGCGAGATCTGCCACAAGAGTTACACGTCGATAGCAGCGTTGAAGAGCCACCGCGGTTGGCATCTCCGCTCACCGGACGGCAAAGCTGCTGCTAATAACTCTGGACTTTGGATGCCCCAGCACAAAGTTACGAGTAAAGTCAGCAAACATGAGGTTACTGAGACTGCGCCAAGCCAACGTAGTCAACATAGCACTCCTGCTTCCATAGCTAAAAGGAGATTACCGCCTGAAGTGGAAGTGACAGTCGTGAATCCAAACAAGAAATTGCGTTCCGACGATTCCGTCGAATTGGATCAGCAGAACATTGGGTCGTTGGAAGACAGATACTGTACTATTTGCGACAAAGAGTTTACCAAACGCGCCGCCTACCAACGACACATGGACGAAGTGCACCAGCCTAATTCCGTTTTCTGCCCCGTATGCGATAAGAGTTTCACCCGGAAGTCGACGCTCCTCGTTCACATGAAGAAACATTACGAAAGCGGGGAGGGTAGTTCGAATGCCATGTCACAGATGGATGAGGAGATACACGCCTGCGATCTATGCGGAGCTCAATACGATAATGCTAAGGCGTTGAGATCTCATAGGGCGAGACACCACGGTGAGGAGTCCGGGGAATCTGAAGACGATGGGAACGTACCGATTCAACCGCCCGGGGAGTTCACGTGTGCGCAGTGCGGGGACGGTGTCGCGACGCCCCGGGATCTAATCGCCCACCGCAGTATGCACGCGACTCCTACTAAATTCTTCTGTAACATTTGCAAAGTTTATTTCGCGAGAGCTCTGGATCTCTCGTCGCACACGCGAGCGAGACACGCCGATAACGAGAAAGTGTTTTTCCCATGTGCCATGTGCGACCGATTCTACATGAATAAAAAAAGTCTCCAAAGACACATAGAAATGTCTCATTGA
- Protein Sequence
- MNVNYERVCRLCLSSRSELLPIFPTTSSDDTDPPVLASKIKDCVSIQITENDDLPTNVCRKCMDNVNNWHIFKSVCERTQNKLQSLINKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPDSENASSSKVQPEGPPILASLGLTPRSDKGLESDKDEEEDEEDINDNSHAFTKVPNMPEVSITVMCPTGETLHARQGIQQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITSKKSHMHMQPKLRPNPFNPKARLMPNPINHKMQFMPKNAPTKIISQKIITPPKPIPIKTVKTQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPDPDAYDHHQADDEHDGEMDINQSQQYDTVDMDSDNEIEIARQQGNASEGDDQNEEDNVHHDDNMEEIHSDNDKDPNDENGDSQDNVVVDDGAEIKLEDETKEEEQGNEKIHENEEHEGNHDDNDDDDEELPPMELAPVVEINEDMQTNSYISEPNEEQEEEELDETADPNETVDEESPDKDLDPDKLYVTKTQRDFIAKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITEDLVLRHEVKNKVHYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLGCVHCRARFKDKSLLKRHIRNGECTVYISCDLCAEKFTNIQDFNDHAVAVHAGNFDQSDNANKCVDGRPTDCPLCGKKNSNYPNLVKHLKMVHNEEKPHYCQHCDSKYEQAADLNKHIYTEHSDRSLGMQRSEPDISLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQSHPGAGIQTAAESEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIIGKPIKQFSMMQPGFVSFKPSYNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADVIGDRNDSEDNTMHASTEEEEFNIDENGGLSTPQFNSFNFTNFTNSTPQPQTETMPYSCELCYQRFPLRTSLWKHKRNKHGIITPNTDFQPQGGFGDNSSRSSCTICKISFSDKKSYYRHRKNVHKSSVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDTQQDVETEYENEQESVDPSVEYQARYPCDTCGKQFVGLLALQNHQCINQQPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVTETAPSQRSQHSTPASIAKRRLPPEVEVTVVNPNKKLRSDDSVELDQQNIGSLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGEGSSNAMSQMDEEIHACDLCGAQYDNAKALRSHRARHHGEESGESEDDGNVPIQPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01316582;
- 90% Identity
- -
- 80% Identity
- -