Basic Information

Gene Symbol
ct
Assembly
None
Location
AY:131787-399133[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.5e-27 4e-23 80.9 0.0 3 70 343 411 341 417 0.94
2 3 4.1e-32 3e-28 97.4 0.0 4 77 745 819 743 821 0.96
3 3 5.9e-31 4.3e-27 93.7 0.0 3 75 948 1021 946 1025 0.95

Sequence Information

Coding Sequence
ATGCACCCAACGGGCGCGGCCAGCCTGCCCGCCGCACCCGAGGCGGAGGTGCAAGCTATGCACTCCATGGACTGGCTCTTCAAGAAAGAGAGGATATATTTACTCGCACAGTTCTGGCAACAGAGAGCCACATTGGCAGAGAAGGAGGTGACTACACTCAAAGAACAATTAGCTTCAACGAGCCCGACCCCTTTCCAAGCGACAGTCCCAAAAACAAATGGATCACATTTAGAAACGACGAGGGACCAAGCCACAGAGACCAGGATAGGCAGGTACAGTCCCGACATCAAAGGAGAGAAAGTACAAGAGATTGATGAGGAAGTAGATAAGATGGAGATGGCTGCAACCGGCAGGAGTAATAGCAATTCGTCTAGAAGCAGTCCAGTTGTACAGAGTGGCAGTTTGGAGAATGAATTAGCTGCTAAAGAAAAAGAGATCGCACAACTAGTCGAAGACGTGAGACGGCTCGAGGCATCGCTTGCAGCGCTGCAAGAGGCGCACACGCAGCAGCTACAGCGGCTTGAAGAGCGACTAGACGAGAAAAAGCAACACATAGCCAGGCTAGAAGCCAGGCTCGACACGCAGAGGGATTACGATGACTTGAAAAGAGAAATAAGCATGCTCCGGTCTCTAGAATTGGGGCCGAGTGAGAGGTCGCTGGAACGCAAGCCTGACCCTCTGAGGCCGCCAAGCGCTGCACCATCCAGGGAAGAACGCAGTTCAGCAGAACGGGACCGCAGTACTGAACGACGAGATCCAGGTGCCGAGGACTGGCCGACGACACCTCCGCCTCTCAACAACAACACTACACACCACAACAACAACGGCCCCATGCATCTGCCTCTACCGCCGCCAAGCCCCTTCCGATTCGAGGAGCATAGACCTTACCGCTTCGCTGAGGACATGGGACCACTACCACCCGGAGCACTCGTCGGGAGACTAGGCGACTCCCTCATACCAAAAGGCGATCCAATGGAAGCGAGATTACAGGAGATGCTTCGATATAACATGGACAAATACGCGAACAGTAACCTCGATACGCTGCATATCAGTCGGAAAGTGAGAGAATTGTTGTCCGTCCACAACATAGGACAGAGGCTTTTCGCGAAATACGTCCTCGGGCTGTCCCAGGGGACGGTGTCCGAGCTCTTATCAAAACCGAAGCCGTGGGACAAGCTGACGGAAAAAGGACGTGACTCGTATAGGAAGATGCACGCGTGGGCCTGTGACGAAGCCGCTATCATGCTGCTAAAGTCATTGATCCCTAAGAAAGTAGGAACAAAAGATGGAACCCCGGGCCCTGGTTTCGGTAGGTCAGACGGCGAGGGTGATGATCGTCTCGTGCATATCCTCAATGAGGCTTCTCATCTGATGAAGACACCGACCGGACAGAGCCACAACGATGACTCCAGGAGTAACGAGGACTCCAGCTCACCGAGGACACAGTGCCCATCGCCGTTTTCCAACAAGGATTCCAGTCAGAATAGAAGGCTCAAGAAGTATGAAAACGATGACATTCCACAAGAGAAGGTGGTGCGCATCTACCAGGAAGAGCTTGCCAAAATAATGACCAGAAGGGTGGAGGACATACGACATAGCCGTGAGGGCTTTCCTGGCGTGTTTCCACCGTTTTTCAGCGGCGGAATGCCACCGCACATGGAGAGGCCACCTGAGGACATCCGCATGGCGTTAGAGGCCTACCACAGAGAACTGGCGAAAATTCAGCCTGGAAGTAACATGCCGAACATTCACAACTTGCCTGCTATGCCGCCATTCCCAAACCTTCTCGCCTTACAACAGCAGGCGATACAACAAGCTCAAAATCAACATATAAATGGTTCTGGAGCAATCCAGGACTTGTCGCTTCCGAAAGACAAGAATACCAAAATCAACGGAATGACTGATAGTGATAAGGAAAGACCTTTGGACGCAGAGGAAGCTATGAGACATGCTGGAAGTGCATTTTCATTGGTCAGGCCTAAATTGGAACCTGGACAGCAATCGACGGGGTCTTCTGCATCGAGCCCTCTTGGGAATGCAATTTTACCACCAGCTATAACTCCAAACGACGATTTCAGCGGTTCGGCTGCTGCGAGCCCTTTACAGCGAATGGCGTCAATAACAAACAGTCTCATATCGCAGCCATCAAATCCACCCCATCATCCGCCACCACAAAGATCCATGAAGGCGGTTCTACCGCCAATCACACAGCAACAATTCGATTTGTTTAATAACTTGAATACTGAAGATATAGTTCGAAGAGTGAAGGAAGCGTTAAGTCAATATTCGATAAGTCAAAGACTGTTTGGAGAATCTGTTCTTGGACTCTCACAAGGGTCGGTTAGCGACCTGCTGGCGAGACCGAAACCATGGCACATGTTGACTCAGAAGGGCAGAGAGCCATTCATCAGGATGAAAATGTTCCTGGAAGACGACAACGCTGTCCATAAACTGGTCGCATCCCAATATAAAATCGCGCCGGAGAAGCTTATGAGGACTGGAAATTACAGCGGAGCACCTCCTTGTCCGCCAAACATGACCAAACCGATGCCGCCGACGCAGAAAATGATCTCAGACGCCACTTCCTTACTGAGCAAAATGCAGCAAGAACAACTGTTAGGACCAACACATCTAGGTCATTTGGGACAACCGACACCTCTCCTGCTGACTCCACCAGGCTTCCCTCCTCACCACGCAGTAACGTTACCGCCGCAGCATCACGACAACAACAATAAGGAACGGAAACCTCCACCCCCTCCACAACCTCACCACCAACCTCCCGTGATGCGCAGCCTACACCAGCACATATCGCCGAGTGTCTACGAGATGGCCGCCCTGACTCAAGATCTCGACACGCAAACCATCACGACCAAAATCAAAGAAGCACTATTAGCAAATAACATAGGCCAAAAGATATTCGGTGAAGCTGTTCTCGGTCTCTCGCAAGGATCAGTCAGCGAGTTGTTATCTAAGCCAAAGCCTTGGCATATGCTCAGTATCAAAGGCAGAGAACCATTCATTAGAATGCAGTTATGGTTGAGTGATGCCCATAACATTGACCGCCTGCAAGCATTGAAAAATGAGAGACGGGAAGCGAACAAACGTAGAAGATCCAGTGGCCCAGGACAGGACAACTCTTCTGACACCTCGTCAAATGACACGTCCGAATTCTACCATTCGAGTTCGCCAGGGCCGACATCAGGAGCACCGTGCGCGAAAAAACAAAGAGTATTGTTCTCAGAAGAACAAAAAGAAGCTTTGAGGTTAGCCTTCGCTTTAGATCCATATCCCAACATGCCCACGATAGAATTTCTTGCAGCAGAACTCGGATTATCAACACGGACTATAACGAATTGGTTCCACAACCATCGAATGAGGTTAAAACAGCAAGCTCCTCACGGTTTACCCGCAGAGCCGCCTGCCAGAGATCAATCCTCAGCTCCCTTCGATCCCGTACAATTCCGTCTACTCCTGAATCAGAGGCTTCTAGAGTTGCAGAAAGAGAGAATGGGTCTCGCCGGTGTCCCGTTGCCGTACCCACCCTACTTCGCTGCGAATTCGAATTTAGCCGCCCTGATCAGTCGCGGTCTCATCCCCCCGGAGGTCGGGAAGGACCAGTCCGGAGGGCTCGACTTATCGATGCCCCTGAAGCGTGAGCCGGACGCGGACGATTTCGAGGACGACGACGTAGAAAGCAATCTCGGATCGGAGGACTCGATGGACGACGAATCAAAGACTGAGCCGAAAGCGGCATCGACGCCCCAGGGGGGTCGCTCCAGCAGGCGGAAACCCGCCGCGCCACAGTGGGTCAACCCCGACTGGCAGGACGAGAAGCCGCGCAACCCCGACGAGGTCATCATCAACGGGGTCTGCGTCATGCGGAGCGACGACTTCAGGAGGGAATCCGAAGAGACTGTGCGAGTCGAGCCGTCGCCGGTGCCGCGAGACCCCTCGCCCGCGCCCCGCGCCCCCCACACCCCGCACACGCCGCGACCCCCTCACACACCGCACACCCCCCACACCCCGCACACCCCCCACACGCCACACACACCCGATGACGTCATACCCGAGGATAAAATAAAGTCTGAAGCAGACGACGACCGGTGGGAGTATTAA
Protein Sequence
MHPTGAASLPAAPEAEVQAMHSMDWLFKKERIYLLAQFWQQRATLAEKEVTTLKEQLASTSPTPFQATVPKTNGSHLETTRDQATETRIGRYSPDIKGEKVQEIDEEVDKMEMAATGRSNSNSSRSSPVVQSGSLENELAAKEKEIAQLVEDVRRLEASLAALQEAHTQQLQRLEERLDEKKQHIARLEARLDTQRDYDDLKREISMLRSLELGPSERSLERKPDPLRPPSAAPSREERSSAERDRSTERRDPGAEDWPTTPPPLNNNTTHHNNNGPMHLPLPPPSPFRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRKVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTPGPGFGRSDGEGDDRLVHILNEASHLMKTPTGQSHNDDSRSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDIRHSREGFPGVFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGSNMPNIHNLPAMPPFPNLLALQQQAIQQAQNQHINGSGAIQDLSLPKDKNTKINGMTDSDKERPLDAEEAMRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFSGSAAASPLQRMASITNSLISQPSNPPHHPPPQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMTKPMPPTQKMISDATSLLSKMQQEQLLGPTHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHQPPVMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALISRGLIPPEVGKDQSGGLDLSMPLKREPDADDFEDDDVESNLGSEDSMDDESKTEPKAASTPQGGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRRESEETVRVEPSPVPRDPSPAPRAPHTPHTPRPPHTPHTPHTPHTPHTPHTPDDVIPEDKIKSEADDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_01443621;
80% Identity
iTF_00114008;