Basic Information

Gene Symbol
pnr
Assembly
None
Location
GWHABGR00000034:231038-242104[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.4e-18 1.9e-14 53.2 4.1 1 35 70 103 70 104 0.97
2 2 2.8e-18 8.4e-15 54.3 6.0 1 34 124 156 124 158 0.98

Sequence Information

Coding Sequence
ATGGACGCAATACACTTGCCGCAGAGCTGGTTGCAAAACATGGCCTTACTCGCAGCAGGGGGCAGCAGCGTACCCGGTGTTGGTTCCATGGCCGGCGGACTCTACGGCCAGAACGTCGTAATGGGTTCGTGGTGCGCCCCTTACGATGCGCTTCAAAGACCTCCCGCTTACGATGGAGTCCTAGAGGTATACGAGGAAGGTCGAGAGTGCGTGAACTGCGGCGCGAACAACACTCCGCTGTGGCGACGGGACTCGACCGGGCACTACCTCTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTGAACCGGCCGCTCGTGAAGCCGAGCAAACGGCTGTCGGCAGCGCGGCGACACGGACAGTGCTGCACCAACTGTGGGTCGCGGAACACGACGCTCTGGCGGCGGAACAACGACGGAGAGCCCGTCTGCAACGCCTGCGGACTTTATTACAAACTACATGGAATTAACAGGCCTCTAGCAATGAGAAAGGATGGCATTCAGACTAGAAAGCGCAAACCCAAGAAGGCCGCAAACGGTGCTAAACCTAACATGGACGCTTCGAAGAAAGAAGGCCACAGTTCTCCGGGGATAGACGACAGTAAATCGAGTATGTCGGACGTGGGATTGCCGCTGACACATTCTCAATCGCAGTCAGGCTCAGTGTCGTCACAGAAGGGTGCGCTCGTAACTCCAGAGTCATCACCGCAAGGCCACCGGCCACTCTCACACCTTCATACGCATCAACATGCTCAGGGTCACGCGCAACAGTATCCGCTGGGTCTACCGACGAGCTCACCGTTCCTCTCAAACCCTTCTCTATTCAACATAAAGAGCGAGCCGAGTCCGAGCAACGGCTACGAGGGGTACCCGACCCCGCACGCGTCCTCACACTACCACTCGCAGCAGCACTACCTACATAGCTTGCAGTACGGTCTGGGGAACGTGGAAGAAGAAGAGGGCAGCGGGTTCCTACACCAGCGCAATGTGACCGCGCACGCCAAGCTCATGGCTTCCACGTAG
Protein Sequence
MDAIHLPQSWLQNMALLAAGGSSVPGVGSMAGGLYGQNVVMGSWCAPYDALQRPPAYDGVLEVYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKAANGAKPNMDASKKEGHSSPGIDDSKSSMSDVGLPLTHSQSQSGSVSSQKGALVTPESSPQGHRPLSHLHTHQHAQGHAQQYPLGLPTSSPFLSNPSLFNIKSEPSPSNGYEGYPTPHASSHYHSQQHYLHSLQYGLGNVEEEEGSGFLHQRNVTAHAKLMAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2