Aper012738.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHABGR00000013:7687845-7705127[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.42 28 5.7 0.2 2 20 1550 1568 1549 1570 0.85 2 7 0.00014 0.0094 16.6 2.0 2 23 1678 1699 1677 1699 0.95 3 7 0.0034 0.22 12.2 4.9 1 23 1719 1741 1719 1741 0.97 4 7 0.0049 0.32 11.7 4.2 1 23 1779 1801 1779 1801 0.98 5 7 0.0057 0.37 11.6 5.1 2 23 1825 1846 1825 1846 0.95 6 7 0.013 0.86 10.4 0.5 1 20 1870 1889 1870 1891 0.93 7 7 0.43 28 5.6 0.7 5 23 2244 2263 2241 2263 0.91
Sequence Information
- Coding Sequence
- ATGGATAGGCTTAACCAATTGCGTGGTGCGGCGGGAGGCTCTGCCGACTCCACGCTAGACACCACGTCTTCGCCGAGTGAAGCTTATATGAGCGCTAACGAGAGCCCATCAAAATATTTCTCTCTCTCAGAAGTAGATACTTCTTTTGATATATCACCAATTAAAGATGTATCATTGGCATCAGCGACCACAGATTCGGAAACTAGCATTGCTGAGGAAGGTTTGATACCCAACCTATCACCGGTCGGAAAGAAAAATGATATTTTAGATAGTTATAAAATTGGGACACAAATCGAAGCGGCCAATATTTTGTCTGGTGGTGTTGATATATTTGATGATAATGATAACTCGTACGATGGTGATGAGCTGGTCATTGATGATAACATTGAGCTTGAAGAGAAACCTAATTCTGAAAAACAAGAAGATCCTGTGGATTTCAAATCGGATATTATTGAGTCGACACTAATTGAAGGAGAAGTAGAAGTAAATGAAGGGGATGTAGCGCGTAAAGATACTGAAGTTGCTTTACAGATTGATGGTAAAAATGTGGGTGCGATCGACATTGGGAACGGATTATACTTGTATAGGAAAGTAGGTGAAGAGGAATTGGCAGCTGTACAGATAATTTATGATGAAAATCAACAGCCTAGTTTCAAATTCCTTAAAGTACGAGAAAATGCTGAAGGTAATTTAGAAGTATATGAAGAAATAGAGGTAGAAATACAAAAAGAAGTGCCTGCTAAAGAAGGAAAATCAACTGATAAGAATATATCACATGTGCCTATAAGGGATATTAGTAAAGTCATAAATGACACTACTTGCAACAAAGTTGCAGATAAAAATAAAACACCACAGGTGGAACAATTAACATCATCAACTAACGATGTACAAAACGAACCCAATGGGTTAGAATTGAAGTCAGAAGTCAATTTAAATGGGAAAATGGTGAAATTTAGTGAATCACGAAAATCACCTGTGGTAGGTAGTTTTGCATATCATTCAACCCCTAACAAAGAAGGCAAACCACTCACGAAAACAATGGTAGATCTACAGCTGCATCCAAGTAGACACTCTGATAATATAAAAAAGACAATCGAAGTGCACACTGATAATTGCAAGCAAAAAATTATAGAAAGCCAAATTAAAAACAAAGAGTTTACTGAAGAAAAAGAATCCCATTCTTCATCAATTGAATCCGAAAGTACTATTATAGTGAAAGAAGATAAAAGTGAAGAAAATATTGAAAAAGCAATAAATAAATCTGATAATATTTCTTTAGAAAATAACGCTCTCAATATACAAGTCTCTAATGATTTAAGTATGTCAGAGGCTAATCAAGCTACAGAAATGACTGAACAAATTGACCAAGATACTGTTCCAGAAAATATAACTAATAAAATATTAATACCAGAAAGTTTAGAAAAGATTGATAAAGTTATTGCTTTAGAAAGCAATGACAATATGTCACAAAGTGATAACTTACAAGAAAATACAGTGAGAGATTATAAACATATTGAACAAGACAATAGTGTTGTTGATATCTTAAAAATGGACATTACGGAGGAAAATATTTTGAGCAATGAGTCAAATTGTGATAACAATAAAAAATGCGAATTGGATCTAAAGTGTCCTCATACTGATATTCAACAAAAGCCTATATGCTCTGAAGATGAACAGAATCAAGATATTAATAAACAGGATAACATAGCTGCTTCAATAGGAGATCATACATATAATGCTGTTGGAATCCATAAAGAGGTTCCAAAAGAAAACAATTATATAGATGTTGCTAAAGAAACGTCAGTGCCAAAAGATAATGAGACAATAAATTTAGATAAAGATTTAAAAGAAAATAATATTCTTCAGAATATTACCCAAGTAAAAGATGTATTTAGTGAGACAGATAAAGCATGCAGCAAACATTTTAAAGGAGATAATGAGCTTAAAGATAACATTGGTCAACTAATTACGAAAGAACTAGATATAGAGAAAGTAAAAGAACAAAATTGTAAAGATGGATTTGATGGTCATACAAATGGGAGTAGTTTGTTTAGCAAAGAAGATATCAAACTAAGAGATACATCTCCAAATAATAAGTCATCTCTTCCGCTGCAGTCAGATTCTCCGAATAAAAATAATGATGCTAACAATTCTTTACATTTAAGGGGTTCTGAAAATTCTGTACCATTAAAAGACGAGTCGTCTTGGGAACAAAAACATTCAATAATGGTTAGGTCAAATGAAATTGTTACTTTACCAGACGGAAAATCGAGCAGTGACTATAAAAATATACTTTATCCGAATGTAAATAACAATCTGCTTGTTGAGGATGGAGATGTAAATAAAACAAATGATATATCGCTCGACACGGATGACAAAGTTATTGAAATTGAAAATAATAAAACACAAAACGATAATGAACAAAAGTCGTCTGAAAATAGAGAAGGAACAACAAAAAAATTGGAATCTGTAGTGACTGCTCAAAATGAAACAAAATTAGATTTAGATTGTAATGACACCCAAAAGGATATTAAAATAAATGATGATGACTCAAAGTCGATCAATAGCTCGGCTGTTCCGTTCGGTAAATGGACAGAAGCTAACAGACAAGAATTTCTAAATAAAATTAAAGGATCCAAAACTTTGGTTAATAGTTCTAATAATAAAGCGATTAAAAATTCCAATGATTTAAATAGGCGTGATGTCCTAAAGAAGATTGATAGTCAAAGGCATACCAGCACATCAAAGGTACAGGATTTAAGTAAAATGAGTACTAAATCGGAAATGGTATTTACAAATAAACCTGCAATCGTAACTGAAGAACTTACAATACTTAATCCGGTACCTAGTAATGAAAGCAAGATTCCCATTAAATCAGGAACTTCTACTTCTAAAACCAAAGACACTACTTTCAAAAAATCTATTAAACAAGATACCTCTCGAAAACCACTAGTTATTCCATCAAAAGTAACTGCAACTGTTACTAGTGTTACGAAAAAAGAATCGGTACAAAGAAAAGCAGTAAAAGATTTAATTGACAGAACTATTGAAGGTATGATAATTAAAGCGTTTCCGTCTAAGTCCACTACAACCGAAACGAAAACAAGTGATTGTAATGTCGGAAAACATCCAACAACTCTAGATGCCATAGAAATGAAAATGAATGAACTACATGGCATTCCATTTATAGAGAGACCTCCACATGAGTTACCTAAGCTACTAAATCCAATTTCACAAAAATATGTTAAAGGTGATCAGGAGCAGGCACCTGACGATCAAGTAACACAAGGGCCTGGATCCTTAAGCAACAAGAAGTCACAAGATCAAGTAAATGATAATGTCCTTGAAGTTGATTCAGAAGAAGAGGTAATTGAACACGAACCTGTGACAGGAGACATTGGAATAAAACATGATCTCCCGTCAAATCTTCATCTAAGCGAAAATTCTATAAAAACGGATACACTTGATTCTAATAAAGACAATACAAAAAAAGAAACCATCATAACAGAAAAAGATTTTGATAAATTTGCAAGAAGGAATTCTGTAACTTATGGAAATTGTCTCACAGTGAATTTCGAGAAACAAGAACCTCTCAATGTTGTTAAAACTGTTGTTGAGACAGAAAAAGCTCCTAAAAATTATAGTAAAAATGAGACTCCGAGGATAGAATATAAACAAAACCGTCCTTCCAAAATTCAAAGCTTAAATTTAAACAAACACCCTAATAAAAATTATCCTCCTACGAAATTAAGTCGGGTCATCGAAGATCCTTCTAATAAGAATTACCATTCTAAGCTACAAATAGCATACCAGTCAGCTTTGACAGCTAAACAACAAATATCTTGTCCCATTAATATAATTGAAGACCAACCAGTAAAAGTAGTATTCATGAACACTAAGACGGATTTAGTTCCGAATTTATTGAATATTCAAGGACAAAAACTATCACCTAGTGAAAAGAAAAATACAAATGTTACCGCCATTAGTAATACAACTGATACTATGGATGCAGACTTAATAGATGCTGTAGATGAAGGAAAATCACAAGATGATGTTAAACTGAAGACGAAACATCAAAGAAAACAAGTTCTAACTCCTGTTGAAGTACCTGAATTGGAATTAATTGAACCCCGTGATCTGGGCATTGAAGTTTCACCTAAAAAGAAAAGAAAAACTGAAGATAGTATAGCTGAAAAAAACTCAAAGAATGTTTTACATAAAAAATCTTATTTGCTTGGACGTGCAGTAGAGGACAAAATACTTAAAACTCAAAATATGACAAAGAATGAGCCAATTATATCTGCAAATAGAGATGAAAAAACAGTGTCTAAGGATACTGTTACAGCTATTGACAGTTTAGTTAAAGCTGCGGAAATGCTGGAAAATCAATCTGAAAATATGAATAACAGCACCATCTCAAATTCTGAGGTCGTACAAAGTACCACACCAGTTAAAAGAGGTAGAGGTCGTCCAAGAAAGTATCCTCTTCCGGACGGTACAATAGTAAAGACGAAGGTGCCCAGTCCTCAAAAGAAACCTCGGCTAATAGATGCCAAACCAATTAGACAGGAAACAGAAGATGAAGAAAGCTCCGATGATGGTGAAATCAAAGAAAACTGGACTATGGGAAAAATAAATGAAAATATTGTTTGTCCCATTTGTAATAAATTATTCAGATCTGAAAATGTAATTTTCAAACATGTAAAACACTGTTCTGGCCCTTCGCCAAACAGATCAGACACAAGTAAAAGGAGTGTTAGGAAAGGAAGATGCTCTCAAGAATCTGACGATAAGTCTCTCGAAAGTCAAGACGAAATGGATGTAGAAGAAATGATAACTTTTGAAGGCAAGGAGGATGTACTTATGGAATGTAAATCGAAAAATTCCATAAGTAAATTAGAAGTAGATAAAGAAGTTATCGCTAATGAAGATAAACCAGTCAAAGAAAAACCTAAAAAAACTATCGATGTAAAGCAAAATGAATCTAGATTGCCAGTTAGGAGCAAAATAAAAATCACGTCAAGTAATCTGGAATGCGAATTTTGCGGAAAAACATTCAGACAACTTTCTTATTTAGCCAATCATAAATTACATCATAAAAAGGACAATATAAAAAAAAGTTACAAGAGTTCTGAAATAGGTACCAAGACCACTTTCAGTTGCGACACATGTAAGAAAGAATTCAGGAAACTACATCATTTAGCGCAACATCGAATTATTCACAATTCGAATTCATTACCCAATAAATTGATGAGAAAAAATTCTAATGAACAAATAAATGATATGTCTGAAAAAGACGAGACCTCCAAACATAACGAAGATCCTAGCGCTGGATTCCGTTGCGAGCCATGCGATAAATCATTCAGGAAATTGCATCATTTAGTAGAACACAGAGAAACTCACGACGGGATCAACAGGCAGAAAACAACGTGCCCCGAACAAGTCGCTGTTGAGAAACCAGTTTCTCCACCTCAGTGTGACATATGCAAGAAAACTTTTCGTAAACTGCATCATCTCATTGAGCATAAAGAACAACACACTGAAACGAGTTCGGAAAAATCCGATGACAAGAGCGTCAAAAGTTCCTTATCAACTAAAGATATTATTCACGAATGTTCTCTATGTTACATGGTGTTTCCTAATGAGCATTCATTGAATAAACATACTATCATATGTCAGAGGAAAAAGAGACAATCAAAGCAATCCAAACCAATTAACGAAGACGGATCTGAAACTATTGAAACAGATCATTGTAAAGCAGAAGAGAATAAAATTGAAGATGGCGATGACCCTGAAATTATTTTAGATGAAGTTAAAGTTATTAATTTAGAAAAAGAAGAAAACAGTGATATTGATTTGCATACGTCAGATGCAATTGTAACAGAAAAAAATACAGACGTCACCGACATACCCGAGTATCAACCGCCAAACAATATTGAAGATAAAAAAATTGAAACTCAAGATAAACCTATTAATATACCTGACAATGATGTAGAAGTCAGCATATCAAAAGAAGAACATTTCATAGAGATCCAAGAAAATCATAATAAAATTGACAGAAAAGATATGGAAATAACTGAAGAAAAACCTAAAAATAAAATTCTTCCTAAAAATAAAGTCACACCACTTGTAACAAAACGCCAGAAGAAATTTAATATTGTACTCGCAACAGTTGAAGAGAACAAACCGTTGGAGGAAATAAGTGACGATGATGAAGTCAGATATATGCTCAATCCTGACTATAAACCTGAAGATAAGTTGGAAGACAAATTATTCCTGAAAGTAAAAGCTACAAAACGTAATTCTCTACAAATCGAGCGTCCGAACTCTAAGGAGCTAATCAAAAGAAGGACATCTTTACAGCACCCTCCAAAAATCCCCCGTTTGAAAACAAAATCGATTGATAACAAGATTTCCCCTTTGAGTACATCCTCAATTAATAACATTCCAAAAAATCTCCAATTAGAACCAACGCCTTCGACAGATTCAGATGATAGCGACGTCAAATATTCTTTCCCTGTAAAAACACCAAAGCCGGTACACGACCGTCCTGTTAAAGAGGCAGAGAAGAGACCACAAAGGAAATCCCTTGAAGAGAAAAGAAAATCCTTGAGCAGCATTGCAAAAAGGAAATCGTTAGGAAAAGTGACAGGAGGAACTATGTCTAAGGTGAAGCAGTCTTCCATTAAACAAGTCAAAAGACGAACAACAGATATTGAACATAGATGTGACTGCGGGCAGCTGTTTAGCAGCGCTGCGCTGCTATCGCGGCATACTAGCCTCGCGCACACCCCCCCGCGGATACGGAAGCGACGTTCACCGCCCCCCGACCTGATCGATACCAAAACCCTCATCAAGCGGACACCGCGCAAGTCTTCCGACAAACCCAAGCAGACAGTCACCGTTGCCACCAGAAAGTCCAGCGTCAGAAGCGACGCCAACAGCTCCCTCTCCAAACCAAACCGACCAGCCAAACCAGAAGTCAAGTCTGACCTCACCAAAACCAGCAACATGAGCAAGCTACGAAGGTCTGGTGTGCTTACAAGTGTTGCGGCCCCGGAGAAAAGAAAAACTATACACCAAAAAGGTAAAATATGA
- Protein Sequence
- MDRLNQLRGAAGGSADSTLDTTSSPSEAYMSANESPSKYFSLSEVDTSFDISPIKDVSLASATTDSETSIAEEGLIPNLSPVGKKNDILDSYKIGTQIEAANILSGGVDIFDDNDNSYDGDELVIDDNIELEEKPNSEKQEDPVDFKSDIIESTLIEGEVEVNEGDVARKDTEVALQIDGKNVGAIDIGNGLYLYRKVGEEELAAVQIIYDENQQPSFKFLKVRENAEGNLEVYEEIEVEIQKEVPAKEGKSTDKNISHVPIRDISKVINDTTCNKVADKNKTPQVEQLTSSTNDVQNEPNGLELKSEVNLNGKMVKFSESRKSPVVGSFAYHSTPNKEGKPLTKTMVDLQLHPSRHSDNIKKTIEVHTDNCKQKIIESQIKNKEFTEEKESHSSSIESESTIIVKEDKSEENIEKAINKSDNISLENNALNIQVSNDLSMSEANQATEMTEQIDQDTVPENITNKILIPESLEKIDKVIALESNDNMSQSDNLQENTVRDYKHIEQDNSVVDILKMDITEENILSNESNCDNNKKCELDLKCPHTDIQQKPICSEDEQNQDINKQDNIAASIGDHTYNAVGIHKEVPKENNYIDVAKETSVPKDNETINLDKDLKENNILQNITQVKDVFSETDKACSKHFKGDNELKDNIGQLITKELDIEKVKEQNCKDGFDGHTNGSSLFSKEDIKLRDTSPNNKSSLPLQSDSPNKNNDANNSLHLRGSENSVPLKDESSWEQKHSIMVRSNEIVTLPDGKSSSDYKNILYPNVNNNLLVEDGDVNKTNDISLDTDDKVIEIENNKTQNDNEQKSSENREGTTKKLESVVTAQNETKLDLDCNDTQKDIKINDDDSKSINSSAVPFGKWTEANRQEFLNKIKGSKTLVNSSNNKAIKNSNDLNRRDVLKKIDSQRHTSTSKVQDLSKMSTKSEMVFTNKPAIVTEELTILNPVPSNESKIPIKSGTSTSKTKDTTFKKSIKQDTSRKPLVIPSKVTATVTSVTKKESVQRKAVKDLIDRTIEGMIIKAFPSKSTTTETKTSDCNVGKHPTTLDAIEMKMNELHGIPFIERPPHELPKLLNPISQKYVKGDQEQAPDDQVTQGPGSLSNKKSQDQVNDNVLEVDSEEEVIEHEPVTGDIGIKHDLPSNLHLSENSIKTDTLDSNKDNTKKETIITEKDFDKFARRNSVTYGNCLTVNFEKQEPLNVVKTVVETEKAPKNYSKNETPRIEYKQNRPSKIQSLNLNKHPNKNYPPTKLSRVIEDPSNKNYHSKLQIAYQSALTAKQQISCPINIIEDQPVKVVFMNTKTDLVPNLLNIQGQKLSPSEKKNTNVTAISNTTDTMDADLIDAVDEGKSQDDVKLKTKHQRKQVLTPVEVPELELIEPRDLGIEVSPKKKRKTEDSIAEKNSKNVLHKKSYLLGRAVEDKILKTQNMTKNEPIISANRDEKTVSKDTVTAIDSLVKAAEMLENQSENMNNSTISNSEVVQSTTPVKRGRGRPRKYPLPDGTIVKTKVPSPQKKPRLIDAKPIRQETEDEESSDDGEIKENWTMGKINENIVCPICNKLFRSENVIFKHVKHCSGPSPNRSDTSKRSVRKGRCSQESDDKSLESQDEMDVEEMITFEGKEDVLMECKSKNSISKLEVDKEVIANEDKPVKEKPKKTIDVKQNESRLPVRSKIKITSSNLECEFCGKTFRQLSYLANHKLHHKKDNIKKSYKSSEIGTKTTFSCDTCKKEFRKLHHLAQHRIIHNSNSLPNKLMRKNSNEQINDMSEKDETSKHNEDPSAGFRCEPCDKSFRKLHHLVEHRETHDGINRQKTTCPEQVAVEKPVSPPQCDICKKTFRKLHHLIEHKEQHTETSSEKSDDKSVKSSLSTKDIIHECSLCYMVFPNEHSLNKHTIICQRKKRQSKQSKPINEDGSETIETDHCKAEENKIEDGDDPEIILDEVKVINLEKEENSDIDLHTSDAIVTEKNTDVTDIPEYQPPNNIEDKKIETQDKPINIPDNDVEVSISKEEHFIEIQENHNKIDRKDMEITEEKPKNKILPKNKVTPLVTKRQKKFNIVLATVEENKPLEEISDDDEVRYMLNPDYKPEDKLEDKLFLKVKATKRNSLQIERPNSKELIKRRTSLQHPPKIPRLKTKSIDNKISPLSTSSINNIPKNLQLEPTPSTDSDDSDVKYSFPVKTPKPVHDRPVKEAEKRPQRKSLEEKRKSLSSIAKRKSLGKVTGGTMSKVKQSSIKQVKRRTTDIEHRCDCGQLFSSAALLSRHTSLAHTPPRIRKRRSPPPDLIDTKTLIKRTPRKSSDKPKQTVTVATRKSSVRSDANSSLSKPNRPAKPEVKSDLTKTSNMSKLRRSGVLTSVAAPEKRKTIHQKGKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114528;
- 90% Identity
- -
- 80% Identity
- -