Aper018910.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHABGR00000047:5710973-5719193[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5e-05 0.0033 18.0 1.3 1 23 190 213 190 213 0.96 2 13 0.38 24 5.8 1.0 2 23 219 241 218 241 0.89 3 13 1.2 78 4.2 1.0 6 23 306 324 306 324 0.95 4 13 3.5e-05 0.0023 18.5 5.7 2 23 337 359 336 359 0.96 5 13 0.49 32 5.5 0.5 6 23 370 388 367 388 0.90 6 13 3.8e-07 2.5e-05 24.7 1.1 2 23 401 423 400 423 0.97 7 13 0.0011 0.072 13.8 1.1 6 23 434 452 432 452 0.95 8 13 0.0024 0.15 12.8 1.0 1 23 464 487 464 487 0.98 9 13 0.0015 0.097 13.4 0.6 6 23 498 516 496 516 0.95 10 13 0.0091 0.59 10.9 1.0 1 23 528 551 528 551 0.95 11 13 0.03 2 9.3 1.1 6 23 562 580 560 580 0.86 12 13 0.00059 0.038 14.6 4.7 1 23 592 615 592 615 0.98 13 13 0.033 2.2 9.1 3.6 6 23 626 644 624 644 0.95
Sequence Information
- Coding Sequence
- ATGGATAACAAGGATAATATAGTACTCAGCTGTGATACACTGGGTACCACAGTTCCAGAGGCATGGCAGAATCTACAGATGTCGTCACCGACACTGACAATGGACAATATAGAGAGTGTAGATGAGCAAGAGTCACTTAATTATCCCAATAATTGTGGGGATCCTTCTGAGCGTCTACAATCATCAGAGTATGTAAATTACTATGAGAATGAGAGTTATGTATTGGAACAACTGAAGACTGAATTCCCTGAGGATGTACTTCCCCAATCAGACTGTAGTGTGAATAGTAAAATACATTGTGAAAATGAGAAATTATTAAAAGTTATAGTAAAAGCAGAACTAAATTATGAAAACATAGAGGATGGACTGTCATTAAATATAAAAGAAGAAAATGATTATAGTGAGTATCAGTTTATTGTAAAAAAGGAGGGGCTTGAGGAGCAAGAAGAGGGCCAATGCAAGTTCTATCACAAAACATTAAAGAATGGTGCTAATTTGTTACAAAACAGTAACAAACATGTTAAAGTTGAAATAAACGCACCACTGGATAATGGAATTACTGAACTACATCAGTGCCAATATTGTGGCAAAGAATTTGATAATTACAATAATATGCTTGTACACATTAATAACGATCATAAACAGGAAAAATCCAAGTGTGATATATGTGAAAAACAAAACAAGAGTGTTGGACATTTAAATCGTCACAGTCTGGCTTTGCATAAACTTGACAAACCACTAGAGCCTATAACTGAAAATTGTGTGAATTGTCATGTGGATACTCAACACAAATGCCCGCTTAATGACCATTCCGAACTGTCTTGTTCTGATAAAGAGGATGGAGAAGATGAGAGTGAAAATAAAGTAACAAGAAATATAACGAATTATGACTATGGGACAACGATCGAATGTTGTTGCGGGAAACAGCACCGTTCACCGATACACTTAACCGACCACCAAAAGGTCATACACCGACCTAAGATTTTGAAAACAAATAATGAGACATTACAATGCAATTCTTGCAAAAAATCCTTTAAAACCAAATGTACTTTAACTAGACATATAAAGCGCGTGCATGTTGATTATGGCAGGATATTTAAATGTTGGTGCATGAAAGAGTTTCGTTCACCGATACACTTAAATGAACACGAGAGAGCCATTCACAGGCGCAATGTTCGAAATATTAATAATGACAAAATCCAATGCGATTATTGTAAGACTTCTTTCACAACTAAATCGAATCTATTGGTACATATAAAGAGACTACATTATGATTATGGGAAACGGTTCGATTGTTGGTGCGGGAAACAGTTTCGTTCACCGTTCCACTTACGCGATCACGAGAGAATCATCCACCAGCGTGATATTCAAAATATTAATAATGGTAAATTCCAATGCGAATCTTGCAAGATTTTTTTAAAAACGAGAACAAGTCTTTTGGCACATATAAAGAGACTTCATTATAATTATGGGAAACGGTTCTATTGTTGGTGCGGGAAACAGTTTCGTTCACCGATACACTTACGTGATCACGAGAGAATCATCCACCAACGTGATATTCAAAATATTAATAATGACAAATTCCAATGCGATTATTGCAAGATTTTTTTTAAAACGAAAACGATTATTTTGGCTCATATAAAGAGAGTTCATTATGATTATGGGAAACGGTTCGATTGTTGGTGCGGGAAACAGTTTCGTTCACCGATGCACTTACGCGATCACGACAGAAGCATCCACCAACGCGATGTTCAAAATATTAATAATGGTAAATTCCAATGCGATTATTGCAAGATTTTTTTCAAATCGAAAAGGTTTTTATTTATGCATATAAAGAGACGACATTATAATTATGAGAAACGTTTCGATTGTTGGTGCGGGAAACAGTTTCGTTCACCGTTACACTTACACGAACACAAGAGACGCGTCCACCGGCGCAATATTTAA
- Protein Sequence
- MDNKDNIVLSCDTLGTTVPEAWQNLQMSSPTLTMDNIESVDEQESLNYPNNCGDPSERLQSSEYVNYYENESYVLEQLKTEFPEDVLPQSDCSVNSKIHCENEKLLKVIVKAELNYENIEDGLSLNIKEENDYSEYQFIVKKEGLEEQEEGQCKFYHKTLKNGANLLQNSNKHVKVEINAPLDNGITELHQCQYCGKEFDNYNNMLVHINNDHKQEKSKCDICEKQNKSVGHLNRHSLALHKLDKPLEPITENCVNCHVDTQHKCPLNDHSELSCSDKEDGEDESENKVTRNITNYDYGTTIECCCGKQHRSPIHLTDHQKVIHRPKILKTNNETLQCNSCKKSFKTKCTLTRHIKRVHVDYGRIFKCWCMKEFRSPIHLNEHERAIHRRNVRNINNDKIQCDYCKTSFTTKSNLLVHIKRLHYDYGKRFDCWCGKQFRSPFHLRDHERIIHQRDIQNINNGKFQCESCKIFLKTRTSLLAHIKRLHYNYGKRFYCWCGKQFRSPIHLRDHERIIHQRDIQNINNDKFQCDYCKIFFKTKTIILAHIKRVHYDYGKRFDCWCGKQFRSPMHLRDHDRSIHQRDVQNINNGKFQCDYCKIFFKSKRFLFMHIKRRHYNYEKRFDCWCGKQFRSPLHLHEHKRRVHRRNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -