Aper015559.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- zfy1
- Assembly
- None
- Location
- GWHABGR00000022:11699717-11713553[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.16 10 7.0 5.0 2 22 242 262 241 264 0.90 2 11 0.00074 0.048 14.3 1.0 1 23 271 293 271 293 0.99 3 11 0.12 7.8 7.4 3.4 2 23 298 320 297 320 0.96 4 11 0.11 7.2 7.5 3.2 1 23 324 347 324 347 0.97 5 11 0.00056 0.037 14.7 2.1 3 23 352 373 351 373 0.98 6 11 0.00057 0.037 14.7 1.2 2 23 377 399 377 399 0.98 7 11 0.0012 0.076 13.7 0.6 2 21 413 432 412 437 0.93 8 11 9.2e-06 0.0006 20.3 0.2 2 23 446 468 445 468 0.95 9 11 0.0083 0.54 11.0 1.1 1 23 474 497 474 497 0.92 10 11 6.4e-05 0.0042 17.7 0.6 3 23 508 528 507 528 0.98 11 11 0.00049 0.032 14.9 0.3 1 23 534 557 534 557 0.98
Sequence Information
- Coding Sequence
- ATGTATAGGATAAAAATGGAAAATACAGTATGCCATGGGTGTCTTACTGCTGAGCGAAGACTCTTGTCTCTTCAAGAAAATTCACGTTTGTTTTTCTATCTTCTGGGTGATAAAAAAATAGAGAAAATTGATGAGTTAGTTGTCTGCTGGGAGTGCATGGAGATGTTGCGGAAAATAAAACTATTTCAGAACAAAATTAGAAAGGCATACAATACATTAATGCATTCATACTTTCAATGGGAGGATCTCCAATCTCTTTCAAGTCTGGGAATAAAAAGAAAAGATACATTCGACATAATAATGGACTACGATTATGAAAATTCACTCAATTGTCCAATAAAAGAAGAAATAACTTCAGATGATATCTCTAGCATAGAAGTAGCAGTGACGAAAGAAGAATGCGACGTAGATTACGATATTGATAATATGGATGCAGAGGATAGTTTCCTGGTACCGTGTGCAGAAGAAATTATCGACGTGGGTGTTCCAGAGGTGAAAGTGGAGGAGATAAAGAAAAAGAAATTAAAGGGAGCGGAGAAAGAGATAAGGAGACAATCGATTAGAAAGTATGAGAAGTACGCGAAGATAGAGAAAAAAAATGAGAAGGTCAATATGGATGAAATAAAGCAATATTACAAGAAGGTGTTTTTAAGTGAGAAAGAGATGGAGGAAGTTTTAGACAGGAGAGACAGGAAGGAGTGCGGGTTTAACAAGATGCCATTGAAATGCGCTACATGTCACTTGGGCTATAAGAGAAAGAGAGACTTTAATAGGCATAATGCCTTCCATCACATGGAGGTAGTCGAAAAGTACAAATGTACGGAATGTCAAACGAAATTGTCGACTAGGGAAGAGATAGAAACCCACTGGCGGCGTCACACGCCCATGTTACGTTGCACCCAATGTCACGAACTCTGCCGGTCACTCGGCGAGATGAGGAAACACGTGAATCGAGCTCATACTGCACTATACACATGCAAGGAATGCAGTATGCCGTGCGGAACGTTACGCGAATTCAGCAATCATTACAAGAATACACACGAGCGACTGCTGTGCGACCATTGCGGGAAGGGATTCTTCAAGAAGACGATGCTTGAAGGACATATAAAACGGAACCACCTGCCGGCTAAATGCGAAGTCTGCGGCCGTCTCTACAGCCAATACCATGTCCTAGAAAACCATTTGCGAACTTACCATCCGCACCTGATGCGTGGGGCCGCAAACCCCGATGCCTCCTACTGCGTCGAATGCGACAAACAGTTCACGAGCGTGTACAAATACCGCCGGCATATAATGCAATCCGCGAGACACACACCGCAGAAGAGGATCAGGGTACCGTGTCCGGATTGCGGGAAGATTTTCACAAGGACCACGTATATGAACAACCACTATCGCCTAGTCCACGTTAAGGACACGAAACATTACTGCGATCTCTGCAATAAGTTCTTCGCAACGGGTTACGCCGTGAGGAAACACGTCGAGTACGTGCACGAGAAACGGATGATGCCCAAGAATAAGATCTGCGACATATGCGGTCGAGGTTTTAGCACGAACAGAATTTTAAATAACCACCGCAGAACACACACCGGCGAGCGGCCTTTCAAGTGTCAGTATTGTGCTGCCGCCTTCGCACAGAGCACAGCGATGCAAACACACATAAAAAGTCAACACAAGAACTGTATACCACAGTGA
- Protein Sequence
- MYRIKMENTVCHGCLTAERRLLSLQENSRLFFYLLGDKKIEKIDELVVCWECMEMLRKIKLFQNKIRKAYNTLMHSYFQWEDLQSLSSLGIKRKDTFDIIMDYDYENSLNCPIKEEITSDDISSIEVAVTKEECDVDYDIDNMDAEDSFLVPCAEEIIDVGVPEVKVEEIKKKKLKGAEKEIRRQSIRKYEKYAKIEKKNEKVNMDEIKQYYKKVFLSEKEMEEVLDRRDRKECGFNKMPLKCATCHLGYKRKRDFNRHNAFHHMEVVEKYKCTECQTKLSTREEIETHWRRHTPMLRCTQCHELCRSLGEMRKHVNRAHTALYTCKECSMPCGTLREFSNHYKNTHERLLCDHCGKGFFKKTMLEGHIKRNHLPAKCEVCGRLYSQYHVLENHLRTYHPHLMRGAANPDASYCVECDKQFTSVYKYRRHIMQSARHTPQKRIRVPCPDCGKIFTRTTYMNNHYRLVHVKDTKHYCDLCNKFFATGYAVRKHVEYVHEKRMMPKNKICDICGRGFSTNRILNNHRRTHTGERPFKCQYCAAAFAQSTAMQTHIKSQHKNCIPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01317612;
- 90% Identity
- iTF_00114402;
- 80% Identity
- -