Basic Information

Insect: Antheraea pernyi
Gene Symbol: ZEB1
Assembly: None
Location: GWHABGR00000022:8880749-8906654[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00044 0.029 15.0 2.7 1 23 226 248 226 248 0.98

2 10 0.00013 0.0087 16.7 2.0 1 23 309 332 309 332 0.98

3 10 0.0038 0.25 12.1 1.5 1 23 336 359 336 359 0.95

4 10 0.12 7.8 7.4 1.2 1 19 369 387 369 390 0.93

5 10 0.0036 0.23 12.2 0.6 2 23 403 424 402 424 0.97

6 10 0.00025 0.016 15.8 1.5 2 23 430 452 429 452 0.96

7 10 6.6e-05 0.0043 17.6 3.0 2 23 471 492 470 492 0.97

8 10 4.9e-05 0.0032 18.0 0.5 1 23 498 520 498 520 0.99

9 10 1.7e-06 0.00011 22.6 1.5 1 23 526 548 526 548 0.98

10 10 3.4e-07 2.2e-05 24.9 1.6 1 23 554 577 554 577 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00044	0.029	15.0	2.7	1	23	226	248	226	248	0.98
2	10	0.00013	0.0087	16.7	2.0	1	23	309	332	309	332	0.98
3	10	0.0038	0.25	12.1	1.5	1	23	336	359	336	359	0.95
4	10	0.12	7.8	7.4	1.2	1	19	369	387	369	390	0.93
5	10	0.0036	0.23	12.2	0.6	2	23	403	424	402	424	0.97
6	10	0.00025	0.016	15.8	1.5	2	23	430	452	429	452	0.96
7	10	6.6e-05	0.0043	17.6	3.0	2	23	471	492	470	492	0.97
8	10	4.9e-05	0.0032	18.0	0.5	1	23	498	520	498	520	0.99
9	10	1.7e-06	0.00011	22.6	1.5	1	23	526	548	526	548	0.98
10	10	3.4e-07	2.2e-05	24.9	1.6	1	23	554	577	554	577	0.98

Sequence Information

Coding Sequence: ATGGGGAAATTAATGGCGTGTCGGGCCTGCTTGGCCACGGACGTAAAATTATACTGCATGTGTAAATTTCGATTGAAAAAAGCTTTCGAAAATGTTACCGATACAAAAGTGACAAGAGCACAGAATTTTCCGCAGTATTTATGCAGTTATTGTGCAATGTTGGTGCTTAAATGTGAAGCTTTCAAAGAGAAATGTGAACGGGCAAAAGAACTGCTGAACATCACTATTATGCAGTATAATGAGATTACAACAAATCACATCCAGAATTTGGACAGAGTTTCTAATAGGCTTACCTTACCACTTGAAATACATAGAGTTGATATGGACCCTACAGACAACAACAATGAGGATCTCAGCTACCTCCAAGATGACTTCCTCATGGGGAATAAAGATATTATTGGGGAACTTGTGGAGGATATGAAAGATATCTGCAGTTTCACAACCGATTTTGACGATCCTGATCAAATTGATTTGTTGGACGGCTATGTTTCTAGTGACGATGAGCCTCTAGCAAGGAAAGTCAACAAGGCTCGTAAGACTAACTGCAGTGACGAAGATTCAAATGTCGCCCGAGAGAATGAGTTGAAAGACATAGAGATTGTGGTTTTGACGAAGGAACAACAGATGGAAGAGATCCAAGCGAGGAAGGCTTCTGTGAACTATCAGACCTCGATCTTCAAATGTGAGATGTGCTTCAAAGGATTCATAACCGAGACAACGTACCAGAATCATATGTTCAAACATGATCCGGCGAGTGGTGCTCATTCTTGTGATATATGTCTGACGCGATGGATGGATATGAAGTCCCTGAGATCACACGTGGCGATAGCTCACGAGAGGAAATACTTGTGCAAGCGCTGTAACAACGTCTCTAGGTCTCTGCACCGGGCTAAAGAGCACAGTTCCTGGCACGATGGTTACGTATTCCGGTGCAAAGTGTGCGGTTCAACGTTCTCGAAGTCGACGAGCTATCTGACTCACGTCCGGATGCAGCATCCCTCGAAGCATTGCTGCGATCTCTGTGGCGAATCCTTCATCGGTGAAAACGGCTTAAGGATACACAAGAAAAAGGCTCACCGTCACCAGCAAAAATGGAAGAAAGAGCACAAGTGTACAATGTGCAAAGTCCAGTTCCACAACATGGACGCGCTCAAGATGCACTCCTCAATGTCGGATCCTTCAAGCGGATGCGATACTACCCTCAAACCTTGCCCGGAATGCGGTCACAGTTTCCTAAGCGATGAATCAGTACGCGACCATATGAAAACGCACAGAAAAAATATAATCAAATGCAATGATTGTAATCGAACCTTCGCCCACAAACGTTCGATCGCTGTCCACTACCAACGAGTGCATATGGGGTTGAAGCTCGCCCGTCCGGCACCGGATAAGGGGAAAAGCATGATGACGGTCTGCGAGATGTGCGGGTACAAGTGCATTTCAAAAGCTTCACTGATACACCATCAAAGGACCCACACCGGTGAAAAGCCATACCAGTGTCCGGAGTGCCCGAACAGATTCAGTGTTTATCAGCGACTACAGATCCATCTCCGCACTCACACAGGGGAGCGTCCCTACAAGTGTGCACAATGCCCGAAGGCTTTTAAACACAAGGCCGCCCTCAATCGGCATAACCGAGTACACACGGGTGCAAAGCCATACCAATGTCCGCACTGCGGCAGAACATTCTCCCAGTCCAACTCTATGAAAATACACGTACAGACAGTTCACATGAGGATGCCGGCCCCTTACAGGAAGGAACGGAAATCGGAACGCGGAACGGAGCTCTCCTGCGTTGAAGATGATGAATGA
Protein Sequence: MGKLMACRACLATDVKLYCMCKFRLKKAFENVTDTKVTRAQNFPQYLCSYCAMLVLKCEAFKEKCERAKELLNITIMQYNEITTNHIQNLDRVSNRLTLPLEIHRVDMDPTDNNNEDLSYLQDDFLMGNKDIIGELVEDMKDICSFTTDFDDPDQIDLLDGYVSSDDEPLARKVNKARKTNCSDEDSNVARENELKDIEIVVLTKEQQMEEIQARKASVNYQTSIFKCEMCFKGFITETTYQNHMFKHDPASGAHSCDICLTRWMDMKSLRSHVAIAHERKYLCKRCNNVSRSLHRAKEHSSWHDGYVFRCKVCGSTFSKSTSYLTHVRMQHPSKHCCDLCGESFIGENGLRIHKKKAHRHQQKWKKEHKCTMCKVQFHNMDALKMHSSMSDPSSGCDTTLKPCPECGHSFLSDESVRDHMKTHRKNIIKCNDCNRTFAHKRSIAVHYQRVHMGLKLARPAPDKGKSMMTVCEMCGYKCISKASLIHHQRTHTGEKPYQCPECPNRFSVYQRLQIHLRTHTGERPYKCAQCPKAFKHKAALNRHNRVHTGAKPYQCPHCGRTFSQSNSMKIHVQTVHMRMPAPYRKERKSERGTELSCVEDDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00114380;
90% Identity: iTF_00114380;
80% Identity: -