Aper015598.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHABGR00000022:5402450-5446438[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.2e-06 7.5e-05 23.2 1.3 1 23 30 52 30 52 0.97 2 15 0.12 8 7.4 6.9 1 23 58 81 58 81 0.97 3 15 0.002 0.13 13.0 2.3 2 19 88 105 88 109 0.94 4 15 1.7e-06 0.00011 22.6 0.8 1 23 115 137 115 137 0.97 5 15 0.00076 0.05 14.3 1.7 1 23 143 165 143 165 0.96 6 15 3.8e-05 0.0025 18.4 1.0 1 23 172 195 172 195 0.96 7 15 0.009 0.58 10.9 0.0 1 23 203 226 203 226 0.96 8 15 0.00011 0.0071 17.0 0.6 2 23 233 254 232 254 0.96 9 15 0.24 15 6.5 1.2 1 23 260 284 260 284 0.85 10 15 0.18 11 6.9 0.4 1 14 290 303 290 308 0.87 11 15 0.04 2.6 8.9 3.2 2 23 324 347 323 347 0.94 12 15 0.013 0.87 10.4 1.3 1 23 354 377 354 377 0.97 13 15 0.092 6 7.7 5.7 1 20 553 572 553 575 0.90 14 15 0.31 20 6.1 1.7 2 23 586 606 585 606 0.85 15 15 0.042 2.7 8.8 3.8 1 23 725 747 725 747 0.98
Sequence Information
- Coding Sequence
- ATGGAAATATGCAACATGACCGGTGGTGATGAGGTACCAAATAGATTAGAGACAAGCGAGGCAGCAGTGACAGAGAAAAAAAAGAAATTTAAATGTGGAATTTGTGACAAGGTGTTCAAAGATAAATATTACCTGCAAACACACTCGCAGATCCATACAAACGTATGCCGTTTCAAGTGTGACCTGTGCTCGTATAAAGGGAAGACAAGGAAGTATCTTATGAGGCACAAAAAGAAATGCCACTCGAAGCCTACGTCCAACGAGTGCAAGTACTGCGGAAAGAAGTTTCACTATAAATCTAAACTTGTCCAGCATTCCTGGGTGCATACTGGTGAAAAGCCCTATGAATGTGAGGTCTGCGGAAAGGCGTTCAATACAAAGTATTCACTGAATACACACAAGTACATACACACCGACGAGAAGCCGTTCGAGTGCTCGTGGTGCGAGTACGCGTGTCGTGACAGCTCCACGCTGCGCAAACACGAAGTGCGGCACAAGGGCTTAGAGAAACTCTACAAATGTAAAATCTGCGATAAAAGTTACAAGGCGAAGTGGAAGCTGAAGCAGCACGTCGCGCGCGACCACCTCCGCCTGAGCCTCGGGACGTACGAGTGCGACGCGTGTGGGCAGCGCTTCCAGGCGCGCGCGGGCCTCGTCAACCATATTCGCGCGGTGCACGAGCGGGCGCGCACCTGCACGTGCGCTGTGTGCGGCGCGCGCCTCGCGCAGCGCGGCAACCTGCGCGAGCACATGCGCCGGCACGCGCCCGCCAGGCCCTACCGCTGCACGCACGCCCCCTGCCGCGGCACCTTCAAGACCACCAGTGAGTTGAAGAAGCACGCGGTGATACACTCGCCGAGCGAGCAGTTCGCGTGCGAGCGCTGCGGCAGGAGGTTCGCGAGACGGCACCGCCGCGACGCGCACTCGCCGCAGTGCCGCAGCGCCGCTACAGCCGCCACAGCCGGCCTCCGGTGCGAGCGCGGCCGCTGTACGCGCACTTTTCATAGCAAGAGGCTTCTGTCCGCCCACGTGAAGCGGCACAGCGTGATGAAGGAACAGTTTGTCTGCGATTCATGTGGATTTACAACTCACAAGAAGGGGAACATCATAAAGCATATAAAATCCATACATTGGATAAAACAAGAAAAAGATGAGACGAGTGAGAAGACAACAGAAGATCAGGTGGAAGTTAAAGTGGAGCCGATTGATGGAGAATCGAAAGAGATGATTGATTCCCTAACCGTAGAGGAATTTTGCGCATCGGAAGGACACGAGGCGACCGCGAGCGCACCCGGGAACGCCCGCGAGCGGCACGCGCACTTCACCATAGAGAAGCACGCGGGGAACTTGAAGCGCGTGCCGGAGAACCTGTTCGACGAGTTCTACATACAGACCTGCACGAGCAAGCGGACGGGTGCCGTTGCGAACAGGAAGAGCAGAACCCTGGACGTGAAAAAGAACGAGTACGTGAAGGAACGTGTGAAAGAGTTATTGTACAATAATAAGGAAGTTGAGCTGAAGAGACGGTCTGCTAGAAGAAGTATCGTCAAAACTATAGGATGGGAAGAAGAAGAGATAGCCAAGGATAGAACGGAAGAGAACGATAAGGACACGGCCGATGAGGACGCGTGTGGGTTGAAACTGAAATTTAACTTCCATCAGTGTTACGTCTGCTTTAAGCTATTCTCGACAAAGAGCCAACTGCTAGTTCACTGCAAAGACCATTTCGATGTATGCTCAGAGACTATGTTAACGAGATGCCCTCTTTGTAAATACGTGACAAAGAAAGACATGAAACGCCATATGAGAGAAAAGCACGATATGAACCTGGATATACCGTATTCTAGAATAATAGAGAAGCCAAACGGTAACGGCACATCTAGATATTGTTTCGAAGTGGACGACACTGTTTTGGAAGTGATACCGAGTGTCAAGAATCTGAACAAGATCGAGAGCATGAAGTTGGATAGGAAGAGAAGAGAGTTGCGGGAGAAGTTTATAGGGAAGACGAAACTGGTGAAAAAGGGGGGAGAATGGATAGTTGAAAGGGTGAAAATTGATAAAGAAGAGTACGTGTTACCGGACGATTTCTCCTACAGCGATAACGAAGAGTATCTAGAGAAGATAAGAGAGTATAGCATGAAAGCGAAGAAGGAAGGGAAGAAGATGCTGTTCCCTTGTAACTCGTGTGAGAAGAAATGCCAGTCGATGAGCGCGTTGAAACTGCACTTTAGAAAACACGAGAAGGATCCAAAACCGTTTAAGCCGAAGCGATGGAAGCACAAAGGAGACGTAGAAGAAGAGAAGACGGTTACACTGAACAGCAATAGATTGGAGAAACCTAAGCCAATCGTGAGCAAGCATAAGTGTGATAAAAGCCTCATGGAGTTCTATAATAATAACATCAGAGGTGGTGACATCGAATTCTGGCAGTTCCTGAAGATATATAACAGAATGTCGAGGGAGAATGTTAAGGAGTTCGAGGATTTAGAGTCGAGGACTGACTTTGGAATTCATGTTAAAGATATTTCAGAAATGGGAGAGAGGACAGCGGTGAAATAG
- Protein Sequence
- MEICNMTGGDEVPNRLETSEAAVTEKKKKFKCGICDKVFKDKYYLQTHSQIHTNVCRFKCDLCSYKGKTRKYLMRHKKKCHSKPTSNECKYCGKKFHYKSKLVQHSWVHTGEKPYECEVCGKAFNTKYSLNTHKYIHTDEKPFECSWCEYACRDSSTLRKHEVRHKGLEKLYKCKICDKSYKAKWKLKQHVARDHLRLSLGTYECDACGQRFQARAGLVNHIRAVHERARTCTCAVCGARLAQRGNLREHMRRHAPARPYRCTHAPCRGTFKTTSELKKHAVIHSPSEQFACERCGRRFARRHRRDAHSPQCRSAATAATAGLRCERGRCTRTFHSKRLLSAHVKRHSVMKEQFVCDSCGFTTHKKGNIIKHIKSIHWIKQEKDETSEKTTEDQVEVKVEPIDGESKEMIDSLTVEEFCASEGHEATASAPGNARERHAHFTIEKHAGNLKRVPENLFDEFYIQTCTSKRTGAVANRKSRTLDVKKNEYVKERVKELLYNNKEVELKRRSARRSIVKTIGWEEEEIAKDRTEENDKDTADEDACGLKLKFNFHQCYVCFKLFSTKSQLLVHCKDHFDVCSETMLTRCPLCKYVTKKDMKRHMREKHDMNLDIPYSRIIEKPNGNGTSRYCFEVDDTVLEVIPSVKNLNKIESMKLDRKRRELREKFIGKTKLVKKGGEWIVERVKIDKEEYVLPDDFSYSDNEEYLEKIREYSMKAKKEGKKMLFPCNSCEKKCQSMSALKLHFRKHEKDPKPFKPKRWKHKGDVEEEKTVTLNSNRLEKPKPIVSKHKCDKSLMEFYNNNIRGGDIEFWQFLKIYNRMSRENVKEFEDLESRTDFGIHVKDISEMGERTAVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -