Aper018787.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHABGR00000047:4705789-4735285[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0002 0.013 16.1 0.8 1 23 166 189 166 189 0.97 2 14 0.062 4 8.3 0.4 6 23 200 217 197 218 0.92 3 14 0.00013 0.0084 16.7 2.9 1 23 230 252 230 253 0.96 4 14 0.049 3.2 8.6 3.0 6 23 264 281 262 281 0.94 5 14 4.2e-06 0.00027 21.4 4.4 1 23 298 321 298 321 0.97 6 14 0.0014 0.091 13.5 2.0 2 23 445 466 444 466 0.95 7 14 0.00081 0.053 14.2 1.3 2 23 525 547 524 547 0.96 8 14 0.018 1.2 10.0 2.5 6 23 558 576 556 576 0.94 9 14 4.9e-06 0.00032 21.2 1.4 1 23 586 608 586 608 0.98 10 14 0.036 2.3 9.0 2.2 6 23 619 637 617 637 0.93 11 14 5.7e-05 0.0037 17.8 3.2 1 23 653 676 653 676 0.97 12 14 0.015 0.97 10.2 2.1 5 23 686 704 684 704 0.95 13 14 0.00023 0.015 16.0 3.3 1 23 719 742 719 742 0.97 14 14 0.039 2.5 8.9 0.1 6 21 746 761 744 762 0.92
Sequence Information
- Coding Sequence
- ATGGAGAGACAGGAAACAGTACAGTGTCTAAATGAGGAAGTAACATCGCAGGTCATCGATGAGGAAGGAACATCCTGCAATAATTATATGTATCCATATAACACATTACAGTCATCGGATTACGTAAATTACTATGACAGTACAGACTATGTGTTGGAAGAAGTGAAGAATGAATTCCCTGAGGATGAGTGTCCTCAGCCAGTCCTCAGTATAAGCAGTAAGTTGGGGTTTGAAAATGAGGAACCTTCAAAGGTTGTGGGGGCAAAAGGTATAGAACAGGAAATTGAAAAGGAGGAATTATCGTCAATTATAAAGCAAGAAGTTGACGATATAAACAATCAATTTATAGTTAAATCGGAGATACTAGAAGAACATAGAGTATCGGATAATGTTGCAAACACCAGCAAACATTATGAGGTTCTGACAACTCCTCAAGCAATTCAGTTCGAATTGTGTGGTACAATATCACAAAATAGTAATAATGAGGAACTGACATATAAATGTGAGTCATGTGATCGCATTTATAAAAAACAAGGATTTTTACGAATACACATGGAGAGGATTCACGGTGGCTATGGGAGAGTATTTCCATGTCGGTGTGGGGAACAGTTCACATCACCGATACAATTAAATGTACATAACATTAAGCACCACTGTTCAAGTATTACGAATGGGGGCAACAATGGATTCCAATGTGACTACTGCCTGAAAATTTTCAAAGTCAAAGGTAAATTAGCAAAACATATAAAATATCATCATTATGATTATGGTAAAACATTTGAATGTCGATGCGGGAAACAGTTCTCTACGCCGATGCACTTATCCACACATAAGAGTTACCATATTAGATCTAAAGTTAGAAATGCTAGTAAGCGATCATTAAAAACCAAATTCGAATGTGATATATGTCACAAGTCGTTTAAAAAACAGAAATATTTAAACTTACATATGAAAAGTAGTCATTATGATAATAGTAAATTGTTCGTATGTTGTCCATGTAAGCCATTACAGCCATCAGAGTGTGCGAATTACTATGACAGTAAATTTTATGTGTTGGATGAAGTGAAGAAAGAATTCCCAGAAGATGAATGTCCTCAACCAGTGTGCAGTAGATTAGTTTTTGAGAATGAAGAATTTTCGAAAATTACGAGGACTCAACATGTGGAACAGGAAAATCAAAAGGAAAGATTTTCATCAATTGTAAAGGATGGCATTAATGATACAAACAATCAATTTATGGTGAAAATAGAAAGACCAGAAGAGCATAGAGTATCGGACAATGCTGGAGTCGTCAGCAACCATTATAATGCTCTAGTAACTCCTCAAACAATTCAATGCAACTTGTGTCGTAGAACATTTAAGAATAGGTTTGATTTATTACAACACAACAAGGAACATATAAAAATTGTAATGTATCGGAAAGCAATGGATAAAGAAACGAATGAGTTATGCAAGTGCCGTTGTTGTAATAAATATTTTAATAATTATGATACTGTCATGGCACATCTCTGCAATGTGGATAGAAATCCATATTGTACTCGGAAGAATGGCATCGAAATGAAATATACGAGCACATGTTACTTGTGTAAACGTGTTTACAAAACTAAAAATAGTCTATTATTACATATTAAAAGGATTCATTCTGATTATGGGAAGATATTTGAATGTAGGTGCGGGAAACAGTTCCGTTCACCGGTTCACTTACGTGAACATAAGTCTAGGCTCCATAACATCAAAAGTAAGAAGAATGACAGATTCCAATGTGATATTTGTCAGAAAATTTTCAAACATAAAATGTATTTAATAGTACATATAAATATTCATAATGATTATGGTAAATTATTTGAATGTTGGTGCGGAAAACAGTTCTCTAAATCAATACAGCTACATAGACATAAGATTCGGGTACACGGCGTCAGAGTTGAAAATGAAAATGATTCATCATTACAGACACAATTCGAATGTGACTTTTGTCATAAAAATTTTAAATTAAAAGACTATTTAATAAAACATATTAAAAGTATTCATTATGATTATGGGAAATCATTTGAATGTTGGTGCGGGAAACAGTTCTCCACACCAATGTACCTACATAAGCATAAGACGCGGCATATGGATGCTAAAGTTGAAAATGGAATTAATGACGGCCACCAATTCCAATGTCATATTTGTCATAAAATTTTGACTAGAAGAACATATTTAGCGGAACATATAAAGAATGTACATGAGTGTTGGTGCGGGAAACAGTTCAGTACACCGGAACGTTTAAGAGTACACGAGAGAGAGTACAATTGTAAGCATAACAGTGAAAACGACAATAGTGCAAAGGTATTTAACCAAGCATATGAAAAGAATGCATTGGGACCAGTCAGTGGTAGAAGAGATCAATATAGCGTAACGAGTACAGCGATATTGTATGTACAGGTAGCAAACACTGGTCCATTACATCATTTTCCCAAGCCAGAATGGCCTCATACGGAAAAATTTAATATATGGAAAGCTGTACTTGATCAAAGCACTCAAGAAAAAGGGGATAACTATATACACAATCAAGTTCGATTATGTTATAGACACTTTGAGCAATATTATCGCTTACCCAGTAGGCTGCTTACAAAAAATGCAATTCCTACTTTGAATCTTAGATCATCATTGCAAACATATGTTGCAGAATCAGCAATGATGCCTGAAATCATTGAGATACCTACAACTTCTAGCACATCACAGGAACTTCAACCAACTGATAGAAAGAAAGGCCTATGCACTTATGAAAACAAGGATGCTATGAAGTTTACAAAGAAGCTGCTTAAACTTAGAGCAAAATGGATACCTGCGTTGGCGGGTAACGACGACAGCAGCCAGGCTTGCGGCGAAACATACGATGTCGTGGCGAGGCAAGTGGACGTAAGATGCGTGCTCAGCTCTCTTCGAGGGTGA
- Protein Sequence
- MERQETVQCLNEEVTSQVIDEEGTSCNNYMYPYNTLQSSDYVNYYDSTDYVLEEVKNEFPEDECPQPVLSISSKLGFENEEPSKVVGAKGIEQEIEKEELSSIIKQEVDDINNQFIVKSEILEEHRVSDNVANTSKHYEVLTTPQAIQFELCGTISQNSNNEELTYKCESCDRIYKKQGFLRIHMERIHGGYGRVFPCRCGEQFTSPIQLNVHNIKHHCSSITNGGNNGFQCDYCLKIFKVKGKLAKHIKYHHYDYGKTFECRCGKQFSTPMHLSTHKSYHIRSKVRNASKRSLKTKFECDICHKSFKKQKYLNLHMKSSHYDNSKLFVCCPCKPLQPSECANYYDSKFYVLDEVKKEFPEDECPQPVCSRLVFENEEFSKITRTQHVEQENQKERFSSIVKDGINDTNNQFMVKIERPEEHRVSDNAGVVSNHYNALVTPQTIQCNLCRRTFKNRFDLLQHNKEHIKIVMYRKAMDKETNELCKCRCCNKYFNNYDTVMAHLCNVDRNPYCTRKNGIEMKYTSTCYLCKRVYKTKNSLLLHIKRIHSDYGKIFECRCGKQFRSPVHLREHKSRLHNIKSKKNDRFQCDICQKIFKHKMYLIVHINIHNDYGKLFECWCGKQFSKSIQLHRHKIRVHGVRVENENDSSLQTQFECDFCHKNFKLKDYLIKHIKSIHYDYGKSFECWCGKQFSTPMYLHKHKTRHMDAKVENGINDGHQFQCHICHKILTRRTYLAEHIKNVHECWCGKQFSTPERLRVHEREYNCKHNSENDNSAKVFNQAYEKNALGPVSGRRDQYSVTSTAILYVQVANTGPLHHFPKPEWPHTEKFNIWKAVLDQSTQEKGDNYIHNQVRLCYRHFEQYYRLPSRLLTKNAIPTLNLRSSLQTYVAESAMMPEIIEIPTTSSTSQELQPTDRKKGLCTYENKDAMKFTKKLLKLRAKWIPALAGNDDSSQACGETYDVVARQVDVRCVLSSLRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -