Aper018851.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHABGR00000047:14727962-14735218[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00046 0.03 15.0 1.7 1 23 70 92 70 92 0.97 2 23 0.2 13 6.7 0.1 2 23 118 140 117 140 0.96 3 23 0.042 2.7 8.8 0.3 3 23 164 185 162 185 0.95 4 23 0.045 2.9 8.7 0.6 3 23 193 214 192 214 0.94 5 23 1.7 1.1e+02 3.8 0.1 2 14 220 232 219 235 0.89 6 23 0.055 3.6 8.5 10.7 1 23 276 299 276 299 0.98 7 23 6.8 4.4e+02 1.9 0.0 2 23 322 344 321 344 0.85 8 23 0.017 1.1 10.1 0.3 1 20 365 384 365 385 0.94 9 23 0.0024 0.16 12.7 0.8 1 23 393 416 393 416 0.93 10 23 2.1 1.4e+02 3.5 3.7 1 10 421 430 421 444 0.82 11 23 0.041 2.7 8.8 0.7 3 23 450 471 449 471 0.95 12 23 0.0011 0.07 13.8 1.2 1 23 478 501 478 501 0.98 13 23 0.013 0.82 10.5 0.4 2 23 508 529 507 529 0.95 14 23 4.1e-05 0.0027 18.3 0.2 1 23 535 557 535 557 0.98 15 23 1.5e-05 0.001 19.6 0.3 1 20 563 582 563 585 0.95 16 23 0.01 0.67 10.7 2.7 1 19 591 609 591 614 0.96 17 23 0.024 1.6 9.6 2.6 1 23 667 690 667 690 0.98 18 23 0.08 5.2 7.9 0.1 2 23 716 738 715 738 0.86 19 23 3.8 2.4e+02 2.7 2.8 3 16 763 776 761 784 0.74 20 23 0.0012 0.077 13.7 0.0 1 23 790 813 790 813 0.96 21 23 0.0013 0.082 13.6 2.2 2 19 819 836 818 841 0.91 22 23 2.3 1.5e+02 3.4 2.2 1 21 846 866 846 869 0.75 23 23 3.9e-05 0.0025 18.4 0.7 1 23 876 899 876 899 0.96
Sequence Information
- Coding Sequence
- ATGAAAATAAAGACAGATTGGGAACATGCAGTCAAAAAACAGCGTAAAGGTTTAAAAACTATTTGTAAAATAGAGAGAGAGAAAGTGGGTTCAGTTAAAAGAGAAAGAGGAGTGTCGGGTAGAGAAAAACTGCAGGTCCTTAGGGAGAGTGGCGCCCAACTTTTGATGAAGTCAACGCTGATGCCTTTTCGATGGCTAAAAAGCTGTTTTAGATGTTTCTACTGCTACGAGGTATTCAAAGAACCAAGAGATTTGAAATCGCATCAATTCGTGCATCAAGATACAGATTTGATAACGAAAACGATGAGCAAATATTGGGACCCGTTAGTTTACGTCGACGTGTCTAACATATCCTGTAAAATTTGCAATGATAAAGTCGATGACCTTGATAAACTGATAGACCACTTGAATACAAATCATCAAGTAAAATTCAGCAAAGACATTGGCTCCCTAATAAAACCATTCAAACTGCACGACATTACCGTCAATTGCGTGTTATGCGATAAACAGTACACGAACTTCGCATTTCTATTGATACACACAAATAAGGAGCACGCCGGAATCTCTCCCATTTTGTGTGATATTTGTGGACAGCATTTAAAAACTGAAAGGCTTCTGCGCGACCACGTGAGTCAGGAACACGAAAAGAAACCGGTAGAATGCAGTATATGCGGAGAAACCGTTGCGAGATCTTCGAGACAGAAACAGAACCAAACGCCATCGTTACCGAAGACTGATTTGGCTGATGGTAAAAAACTATTGAAGAAACTGAGAGTTTTACTTAATAAATCAAACGTTACGCCGTTTAGGAGACACGGAAGCCAGCATAAGTGCTTCTTCTGCGAGAAATGCTTCCAACACGTTACTGAGTTGAGAAAACATACACGGACGAAGCATTCCGATGAAAATGACCTAGAAAGTCATGTCTCAGAGTCGACGATCAAATTAGATATCACAGATTTACAATGCAAAGTATGCTCTATGAAAGTTGAAAGTATAGAAGAAATGTCTATTCATCTAGACGAAGAACATGGGGAGAATGTGGGAGAGGTCCCAACAGAAGTCGTATGTTTTAAACTGACAGATAATGATTTCGCTTGTTTGCGTTGCGGGAAAAAGTTTAAAATGTTCGGCACACTACTCCAGCATATAGACTGCTATCATCTGGACAAGAATCACGCATGTGAAGCTTGCGAGATCAAATTTCCAACGAAATCGGAACTGCTGAGGCATACGCAGAATACCCATTCGATAGGTGCCTTCGATTGTCCTTACTGCGATAAGAAATTCTTGAACAAATGCCGTAGGGACATTCATGTGAAGCATTACCACGAGTTAAAACGCATCTGTCTCGTTTGTTCTGAGGCATTTACCAATAAGCGTGAGAGGGATCGGCATATGTACAGCAAGCACTCGCAACAAATGCAGTGGTATAAATGCGAACGATGCCCGATTAAGTTCAAGTTGAAGCGGTTGCTGATAGAGCACTACAAACGGGTCCATCTCAAGGAGAAGAACGTGACCTGTGAGATATGTGGAATGACCTTCTTTAGTACAGGTCGTTTGAATTTGCACAAAGTGAGACACAGTAATGAGAAGCCTTTCGAATGTGCGACGTGTGGGAAGCGATTCCCGAGGAAATTCGCAATGGAATTACACGTTCGCATACATACCAACGAGAGGCGGTATTCGTGCAAGATATGCGGTAAAGCGTTCATACAGTGGACGAGTTTGCAGTACCATCTTCCTCAGCATAGCGATGAGAGGAACTTCAAGTGTGTCGTATGCGAGAAGGCGTTCAAAACGAAGAAGACCATGTTGAAGCATTGCGTCAATGTGCATGGGAAGAAAAAGTTGGTGGAACCGGACAACAAGAGAAACCATAAGAGATCAGAGTTGACAACGGGTAAGACCCGTGACAAAATCGAGATTAGGAAATTCGTCAGTGTGGTGCTAGAACTGACGACAATAATGCCATTTAAATGGTTTCACAATCGGTACATGTGCTTCTACTGTCGCATGACGTTTCTAGAAAGCTCTAAACTGAAGGAGCATACGAGAACGATGCACCAGGATGTTAAAATGAAGAGTGTACTTAAAGGAATCGGATCGTATAGTAGAATCAAATGGGATATTTCCGATCTGAGATGCAAGATATGTCCCAAATCGTTGTCAAGCCTAAATGAGGTCGCAGACCACGCTGCAAATTCCCACGATCTCTTCGTAGACATGCATGTGATAGACAAATGCTGCTATGTCTTCCGTTTGTCGGACGATGTAATGCACTGCACGGAGTGTGGGGAAATGTTCAAATTCTTCACACCTCTACTATGCCATGCAAATAAGTATCATAATAAAAGTAAGCGATACGTTTGCGATTTGTGCGGTAAAGGTTTCGCTATCAAAGGCACGATTATAAGCCACATGCAAAACGTTCATTCGGTTATCGCGAATAAATGTACGGTTTGCGGGACGTCGTTTCCGACGCGTCACGCGTTGACCAATCATTGCGAAATCGTTCACAAAGTTGGTAAATTCAACTGCCCAATATGTTCGGAAGCTTTCGGGAGTAGTTATAGGAAGAAATGTCATCTCGCGACGTTCCACGACGTGAAAAGTTACCAGTTTAAATGCGATCTATGCGGGAAGGTTTACCCGGACAAGAGTAAAATGCTGCGGCACAAGTCGAGGGCGCACTTGAAGGAGAAGTCGGTGACATTGTCACAAATGTGGGCACAAAGCGTTTGA
- Protein Sequence
- MKIKTDWEHAVKKQRKGLKTICKIEREKVGSVKRERGVSGREKLQVLRESGAQLLMKSTLMPFRWLKSCFRCFYCYEVFKEPRDLKSHQFVHQDTDLITKTMSKYWDPLVYVDVSNISCKICNDKVDDLDKLIDHLNTNHQVKFSKDIGSLIKPFKLHDITVNCVLCDKQYTNFAFLLIHTNKEHAGISPILCDICGQHLKTERLLRDHVSQEHEKKPVECSICGETVARSSRQKQNQTPSLPKTDLADGKKLLKKLRVLLNKSNVTPFRRHGSQHKCFFCEKCFQHVTELRKHTRTKHSDENDLESHVSESTIKLDITDLQCKVCSMKVESIEEMSIHLDEEHGENVGEVPTEVVCFKLTDNDFACLRCGKKFKMFGTLLQHIDCYHLDKNHACEACEIKFPTKSELLRHTQNTHSIGAFDCPYCDKKFLNKCRRDIHVKHYHELKRICLVCSEAFTNKRERDRHMYSKHSQQMQWYKCERCPIKFKLKRLLIEHYKRVHLKEKNVTCEICGMTFFSTGRLNLHKVRHSNEKPFECATCGKRFPRKFAMELHVRIHTNERRYSCKICGKAFIQWTSLQYHLPQHSDERNFKCVVCEKAFKTKKTMLKHCVNVHGKKKLVEPDNKRNHKRSELTTGKTRDKIEIRKFVSVVLELTTIMPFKWFHNRYMCFYCRMTFLESSKLKEHTRTMHQDVKMKSVLKGIGSYSRIKWDISDLRCKICPKSLSSLNEVADHAANSHDLFVDMHVIDKCCYVFRLSDDVMHCTECGEMFKFFTPLLCHANKYHNKSKRYVCDLCGKGFAIKGTIISHMQNVHSVIANKCTVCGTSFPTRHALTNHCEIVHKVGKFNCPICSEAFGSSYRKKCHLATFHDVKSYQFKCDLCGKVYPDKSKMLRHKSRAHLKEKSVTLSQMWAQSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -