Aper018818.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHABGR00000047:6627736-6646875[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0044 0.29 11.9 0.2 3 23 128 148 126 148 0.96 2 14 0.0017 0.11 13.2 2.7 1 23 257 279 257 279 0.99 3 14 2.7e-05 0.0017 18.9 0.4 1 23 285 308 285 308 0.97 4 14 0.0027 0.18 12.6 3.9 1 23 313 336 313 336 0.94 5 14 6.9e-05 0.0045 17.6 0.4 2 23 500 521 499 521 0.97 6 14 0.00021 0.014 16.1 3.3 1 23 527 549 527 549 0.98 7 14 0.27 18 6.3 5.9 1 23 610 632 610 632 0.97 8 14 0.0024 0.15 12.7 6.5 1 23 667 689 667 689 0.98 9 14 8.2e-06 0.00054 20.5 0.4 1 23 696 718 696 718 0.97 10 14 0.00072 0.047 14.4 2.9 1 23 727 749 727 749 0.99 11 14 0.0012 0.077 13.7 0.4 3 23 797 817 796 817 0.97 12 14 0.0078 0.51 11.1 6.1 1 23 834 856 834 856 0.97 13 14 1.5e-06 9.8e-05 22.8 0.7 1 23 862 884 862 884 0.98 14 14 9.1e-07 5.9e-05 23.5 3.1 1 23 890 913 890 913 0.98
Sequence Information
- Coding Sequence
- ATGAACGGCCTGGCCATGGAGATAGACCCTCTCAGCTCATATGAATACCCTAATTATGACAGCTATGGTAATATCACAACGCCATACAGTTACGAGAAAAAAGTAGACGGCCCAGTACCTTATAATTTTAACCAAAACTACAGTACACTCTTGCCAAACAATGTAGCAGTTACTGATAATATTACAACCAATGTACCTGACACAAATGTTGAAATCCCAGTGGTTAATAACTGCATAGCGCCAGTTAAATATGATGATAAACCAGTCAATGATATAAAACCAGTTATAGAAGACGGGAAGGTAAAACAAGAGAAGCTGAAAGGTAAACGCAGTAGCTATTGGTCAGTGAAAATAGCAGATAAAGATTTTGCGTTCTACGGATGCTCTGTATGCAATATTAGTTTTAAAACTCTTCAAGAATTAGATCAGCATGTCACTGTACATAAGGATAGGATAACGAGCTACGATCTCCGAGTCCAGAATCAGATTAAGAGGAAGAGATTAAAGAAGGAGAAGAAGGTACAGAAGATAAAATTAGAGAAGCCTGAGATAGAGGTAGAAATTAAACCGGAAGATGGGTATATAGGTACAGAGAAAGCGAGTGAATTCAGTGTTAATAGTTTAGTTAGTAATGAAAATAATGGAGAGAGTAATAAGAAAGAAGTAGAAGATACAAACGAGGTGAAGAAGAGTAGAAGTAAGGAGAAGAATGTGTGTAAGAGTATGGAGAATGGGGCAGAGGGGAAGAATGAAGATTTACAGAAGATATATAAATGTTTCGCATGTCAGAAGCAGTTTACATTGAGCTATTATTTGCGATTGCATGTAAGATCTCACACAGATGAAAAACCGTATACATGCTCGGTATGCGGTCAGTCGTTCATCACAGCGAGCAAATTGGGTAGGCACAACAAGAGGATACACTTAGCTATAAGATACCAGTGCAGGATATGTTTTAAATACTTTTCCCAGTTCGACCTTTTGACGAGACATTTTGATAAAAAACACGCGGAGGATAAACTGGAAGGGGAACCTTATGACTACAACGCCATCTTACCGTATCTGAAAGAACTAGAAGAGCAGATGAAGGAGAAAACGGAAGCAGAGAAGAAACCAAAAGTAGAAGAGCTATGGCCCGATAAGTGGGTGGGAGATCAAGATGAAGGCAACAACGACCTGAAAGTCGAACAAATTCAACCGGATCAGGAAGAGCTCAGCAAGGAACCTCAACGGTTCTTGAGCATCGTCAATCCACCCCCAGATATAATTATTGATGAGTTAACTGTCCATGAGGAAGACTTGGTGAAACAGGAACTGGAAGATGATGATTTCATGAGGGATGATCATCACGAGGTGGATTATAAGGATGACAACAGTTGCTCTGATGAGGATTATTTCCCATCGAACACGTGGGCGAGGGTGTCCCCGCCCAGATTGGAGCCGGAGACCCCGCCTTCGCCACGACGGACGCGTAGGTCTAAGGGCGATGGTCCCATCACGTGCGACATCTGCCAGAAGACCATCAGCTCGATCACATACCTCAGGATCCACATGAGGACGCACACCGGAGAGAAACCTTTCAAGTGTTATATATGCAATCGTGGGTTTATCACGTCCAGTAAGATGCACCGGCACGTTTTAACGCACTCCGAGACTTGGGATGAAACTATCGTAAAACGCGAGGAAGTGAAGAGCGAAGGAGAAGAAAATGAAGATCTACAGGAGGACGTGAAAGGAAAAAAAGTAAAAAAATCCAAATCCAAGTTCCACAAGAAACGACAGAAGAAAGGTCCAGAGAAACAGAAGAAGAGATACCAAAAGAGGCCTCACTCTTGCGAGTTCTGTCAGAAGAGGTTTCTCCACCTGGAGACGTTGCAAGTCCATAAGAAGTCGCACGAGGGTGAACCTCTGGTACTGAAGTGTAACTACTGCCTCGAAGAGATGCCAGACGAAGCAGCTCGAACTGAGCACGAAGCCTCCCACTCTGGACCGAAGCCTTACGTATGCACGTTATGCGGGAAATGCTATAAGAAGAGAGAGACCCTGGTGTATCATAGGAAACACCACAAACCGGACAAAAGGGAATATATATGCGACATATGCTCGAAGCGTTTCAACTCTCCGGGCAAACTGCAGCGCCACCTGGTGTCCCACCGAGTGGACAAATTCGTTTTGCGATACGAGTGCCCCGTCTGCGCTCACATGTTCAACACTAAATACCACGTACAGATGCATTTGTCGACGCATCAAAAAGAAGGCTTGATAATGGAGGAGAATCGAAACGAAATCCTGGCGATGGTGCTGCAGAACGCTAGGAAGTTTCCTAAACAACCTGACGCGCCTTCAAACCTGACCGACACGATGCCCTCGGACGAACGCAGCCGTATCTGTAACATCTGCGGGGAGATATTCCAGCATTTCTACTATCTGGAGGAGCATCTCAAGGGTCACGGTTCGAGGATAGCAATAGAGGATCTTAACAAGCCAGAAGAGAAGAAGTACACCTGTCAGGTCTGCAAGAAGAGCTTCAAATTGCACTACTACCTGAAGCTGCACAGCTTCACGCACACGAAGGAGAAGCCTTTCATTTGCCAGCAGTGTGGCAAAGGCTTCATCACGAAGGGCAAACTGAAGAGGCACCTGGAAACCCATACGGGGTTGAAGAAGTATCAGTGTCACGTCTGCTACAAGTTCTTCACGAGACCTAGTTATCTTAGGATACATGTGAGGACTATACACGGTACCCAGGACTATAATTTCCGGCTGGACAAGGGTTACGGGTCTCTGGGAGGATTGTCTGTGATGACGCATTTAAGCCAAGGGAGCGTGTAA
- Protein Sequence
- MNGLAMEIDPLSSYEYPNYDSYGNITTPYSYEKKVDGPVPYNFNQNYSTLLPNNVAVTDNITTNVPDTNVEIPVVNNCIAPVKYDDKPVNDIKPVIEDGKVKQEKLKGKRSSYWSVKIADKDFAFYGCSVCNISFKTLQELDQHVTVHKDRITSYDLRVQNQIKRKRLKKEKKVQKIKLEKPEIEVEIKPEDGYIGTEKASEFSVNSLVSNENNGESNKKEVEDTNEVKKSRSKEKNVCKSMENGAEGKNEDLQKIYKCFACQKQFTLSYYLRLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAIRYQCRICFKYFSQFDLLTRHFDKKHAEDKLEGEPYDYNAILPYLKELEEQMKEKTEAEKKPKVEELWPDKWVGDQDEGNNDLKVEQIQPDQEELSKEPQRFLSIVNPPPDIIIDELTVHEEDLVKQELEDDDFMRDDHHEVDYKDDNSCSDEDYFPSNTWARVSPPRLEPETPPSPRRTRRSKGDGPITCDICQKTISSITYLRIHMRTHTGEKPFKCYICNRGFITSSKMHRHVLTHSETWDETIVKREEVKSEGEENEDLQEDVKGKKVKKSKSKFHKKRQKKGPEKQKKRYQKRPHSCEFCQKRFLHLETLQVHKKSHEGEPLVLKCNYCLEEMPDEAARTEHEASHSGPKPYVCTLCGKCYKKRETLVYHRKHHKPDKREYICDICSKRFNSPGKLQRHLVSHRVDKFVLRYECPVCAHMFNTKYHVQMHLSTHQKEGLIMEENRNEILAMVLQNARKFPKQPDAPSNLTDTMPSDERSRICNICGEIFQHFYYLEEHLKGHGSRIAIEDLNKPEEKKYTCQVCKKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHVCYKFFTRPSYLRIHVRTIHGTQDYNFRLDKGYGSLGGLSVMTHLSQGSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114280;
- 90% Identity
- -
- 80% Identity
- -