Aper019026.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Antheraea pernyi
Gene Symbol
-
Assembly
None
Location
GWHABGR00000047:14272294-14306429[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.66 43 5.1 0.9 1 23 354 376 354 376 0.94
2 26 0.00025 0.016 15.8 1.2 2 23 444 465 443 465 0.95
3 26 0.015 0.95 10.3 1.5 1 15 502 516 502 525 0.87
4 26 1.1 72 4.4 2.0 1 19 531 549 531 554 0.70
5 26 0.00011 0.0071 16.9 1.4 1 23 560 583 560 583 0.97
6 26 0.00021 0.014 16.1 3.6 1 23 589 611 589 611 0.97
7 26 1.5e-05 0.00099 19.6 1.9 1 23 617 639 617 639 0.98
8 26 0.0061 0.4 11.5 0.6 1 22 645 666 645 666 0.97
9 26 0.03 1.9 9.3 1.0 1 23 858 880 858 880 0.97
10 26 0.00025 0.016 15.8 1.2 2 23 948 969 947 969 0.95
11 26 0.015 0.95 10.3 1.5 1 15 1006 1020 1006 1029 0.87
12 26 1.1 72 4.4 2.0 1 19 1035 1053 1035 1058 0.70
13 26 0.00012 0.0075 16.9 1.5 1 23 1064 1087 1064 1087 0.97
14 26 0.00021 0.014 16.1 3.6 1 23 1093 1115 1093 1115 0.97
15 26 1.5e-05 0.00099 19.6 1.9 1 23 1121 1143 1121 1143 0.98
16 26 0.0096 0.63 10.8 0.7 1 21 1149 1169 1149 1170 0.97
17 26 1.7 1.1e+02 3.8 0.3 1 23 1350 1372 1350 1372 0.91
18 26 1.6 1e+02 3.9 0.1 3 23 1396 1417 1395 1417 0.91
19 26 0.00024 0.015 15.9 1.3 2 23 1439 1460 1439 1460 0.96
20 26 0.035 2.3 9.1 1.5 2 23 1465 1486 1464 1486 0.96
21 26 1.4 90 4.0 2.8 5 23 1496 1515 1494 1515 0.86
22 26 5.7 3.7e+02 2.1 1.2 1 23 1521 1544 1521 1544 0.83
23 26 0.00035 0.023 15.3 1.5 1 23 1550 1573 1550 1573 0.97
24 26 0.00022 0.014 16.0 1.5 1 23 1579 1601 1579 1601 0.98
25 26 3.5e-06 0.00023 21.7 0.5 1 23 1607 1629 1607 1629 0.98
26 26 0.00031 0.02 15.5 5.8 3 23 1637 1657 1635 1658 0.95

Sequence Information

Coding Sequence
ATGAAGGATTTCAAACTAGATATAACTAATTTACCGCCACATCTGGATACTAGCAAAATTTCAGAAAAAGTGAAGTTGAAAGAAAGTTTGCCTGCAGTGATCGGGTTTATTGAAGCTATGACGTTAAACGAGTCGAGAGAGAAAACTCTAGATCAGAGTACGAAATATGCTGATAAAAGGAAACATTCAAGTGATCTACCACCGAAAGATGTGTTGCTAAAACAAAATAATGTGAATAGATTTACTGCACCACTTTCACCTACAGAACATATAATTGTTTGGAAGGAAGGGAAAAGTGTGGCTCCAAAATCAGCTAACGGAAATATAGTCCGAAGAAATTCGACATTCTTCCAACCAATAAAGGGAAGATATATTACAGTGTTGGGTATGTATAAAGAAAATTACAAAACCAATAGTAGGGAAAGTATAGGAGAAAGAAAAGAAGTTATAAATAAATATAATCAAAATGATATACAAGAAAGTGGAAAAACAAGTGAAGGGGAAAAAGAGACATCAGGCAGTGATGCTATAGACAAAGACTTAAATCCCGGTATGTGTCGGAGTTGTGGCACTATAAAAAAATGTCGACTGCTCAATGTAGAATACGAGTGGTGTGGACAAAAAGAAATTTATTCCGATATGTTTTTTGATTGTTTTGGGCTTCTGTTGTCAAACTTAGACGGAGAGGTTGAGGAAAGATTGATATGTGCAACATGTGTAGTACGGTTACGAGATTCAATTCAGTTCCGGCGTCAGGTCCTGAATTGTGAGGAGGTGCTTCTCAAGAGTAAAATTAATCCAGATACCAACGAACTGAAACCAAAGCAAGAGGTTATAATAAAAGAGGAAACAAATGAGAGAGATCACGAGGACTCGTGCCATGAAGACTTTGTGGAAGACATTACAGATTGCTGTGATGAAGACAAAGAAACCGAGAAGCCTTTAGTGAAGCTGGTTAAAAAGAAAAAATACGTCGATACCGAGTACAACGCTTTACAGAACGCGATAACAATAATCGAAAACTCATACATATGCCCTTTCTTAACTATATACAGCGATTACCATTGCATCTACTGCAAGGAAATGTTCATAGAGCCAGACGTACTGAGAGAGCACACGTTCACACACGACCCAAGGACGTATAAGGAGGTGATAGATAATAAAAAAGTGTTACTTGTCGATATACAGCGTATCGAATGTCGATTGTGTCCTACCAAGCTCGATAACATCGAAGAATTGAAGTGCCACCTCACTAACACACACGAGAAGGTCTTCCACGCGGAGGCTGGGAACGAATTCTTGAAATTTGTACTGAAAAGTGGGAAAATGTCGTGTACACAGTGCGATAAATCGTTCAATTTCTTCCAAGCGTTAAGGAAACACATGGCGGAACACTTTGGAAGTTGGGTCTGTGACGTCTGCGGTGCACATTACTTTGAGGAACGGCTGCTGGTCTTCCATAAGAAGCAGGTCCATAAATCCGATGATGAGGAAGTTAAAATGTACTCGTGTGTTGATTGCGGGAAGAGTTTTAAATCGAAGAAGAGTCGGTACTTCCACGTGGCTAAGATACATAAGAACGAGCCAGCGTACCCTTGCAATAAGTGTGATCAGGTCTTCCTCTCTTACCATCTGAGGTATAAGCATAAGATGGAGGAGCATGGAGAGTTGAGGACCTTTCCCTGTGAGAGTTGTGACAAGGTCTATAACAGCAGGAAATCTTTAAGAGAGCATACGAGGAAGAATCACCTCCTACTTTTAAAGCACGAGTGTGGACACTGCGATAGAAAGTTCTACCTACCGTCCCAATTAAAAGACCATATGACATCGCATACTGGGGAGAGGAATTTCCGTTGCGAGTTTTGTGGTAAATGTTATCCAAGGTTGAAGGCTTTGAAGGTGCATATGGAGTCGCATAGTACCGAGAAGAAGTATAAATGTTCGCTTTGCTCGGCTGGGTATACGCAGCTCAATAATTATAAGAATCATCTGAGGATGAATCGTAAAGGACCTCTAATAGATTTAGGACTTTGCCGATGTTGTGGAGCGTCTAAAACATGTCGTATAATCAACATGGAATATACATGGTGTGGAGAGAAAGAGATCTATTCCGATATGTTTTTCGATTGTTTTGGATTATTGCTCTCACAATTGGATGGCGAGCCAGAAGACCGTCTGATTTGCGCAATGTGTGTAGCTCGGCTGCGTGAAGCAGCAGCCTTTAGGAAACAAGTGCTCGAATGTGAGCAGAAACTTCTACAAAAGACTATACATGTGCATAATACAGGTAGGATTTCTTCAATAGTGTCTAATGATACGAACGAACTGAAACCGAAGCAAGAGGTTATAATCAAAGAGGAAACGAATGAGAGCAATCATGAGGACTCGTGCCATGAAGACTTTGTGGAAGACATTACAGATTGCTGTGATGAAGACAAAGAAACCGAAAAACCTTTAGTGAAGTTGGTTAAAAAGAAAAAATACGTCGATACCGAGTACAACGCTTTACAGAACGCGATAACAATAATCGAAAACTCATACATATGCCCTTTCTTAACTATATACAGCGATTATCATTGTGTCTACTGCAAGGAAATGTTCATAGAGCCAGACGTACTGAGAGAGCACACGTTCACACACGACCCAAGGACGTATAAGGAGGTGATAGATAATAAAAAAGTGTTACTTGTCGATATACAGCGTATCGAATGTCGATTGTGTCCTACCAAGCTCGATAACATCGAAGAATTGAAGTGCCACCTCACTAACACACACGAGAAGGTCTTCCACGTGGAGGCTGGGAACGAATTCTTGAAATTTGTACTGAAAAGTGGGAAAATGTCGTGTACACAGTGCGATAAATCGTTCAATTTCTTCCAAGCGTTAAGGAAACACATGGCGGAACACTTTGGAAGTTGGGTCTGCGACGTCTGCGGTGCACATTACTTTGAGGAACGGCTGCTGGTCTTCCATAAGAAGCAGGTCCATAAATCCGATGATGAGGAAGTTAAAATGTACTCGTGTGTTGATTGCGGGAAGAGTTTTAAATCGAAGAAGAGTCGTTATTTCCACGTGGCGAAGATACATAAGAACGAGCCAGCGTACCCTTGCAATAAGTGTGATCAGGTCTTCCTCTCTTACCATCTGAGGTATAAGCATAAGATGGAGGAGCATGGAGAGTTGAGGACCTTTCCCTGTGAGAGTTGTGACAAGGTCTATAACAGCAGGAAGTCTTTAAGAGAGCATACGAGGAAGACTCACCTCCTACTTTTAAAGCACGAGTGTGGACACTGCGATAGAAAGTTCTACCTACCGTCCCAATTAAAAGACCATATGACATCGCATACTGGGGAGAGGAATTTCCGTTGCGAGTTTTGTGGTAAATGTTATCCAAGGTTGAAGGCTTTGAAGGTGCATATGGAGTCGCATAGTACCGAGAAGAAGTATAAATGTTCGCTATGCTCGGCTGGGTATACGCAGCTCAATAATTATAAGAATCATCTGAGGAATTCCGACAAAAATTATCTGAAGAATGAGATGAAAGAAGAAATGGACGAAAACTGTATAGCGCCTCAAGAGTATGACCTCGGGGAAGGTTATGATGATGACCCCATAGAGAATGGTGCCGATAGAGGTAATATAAGTAATGAAGTTATGAAGAATGAATTGGATAGAAATGTTGTGATATCTCATGAAGATAATAGGGAAGGAGGATACGCTGATGATGATCCTATAGAGCACGATGTTGAAATTATAAAGAACGAGATAAAAATAAAGAAACACAAGGTAGTAGTCAGAAGTAGAAAGAAGGAGAAATTAAAAATGTCCTCAAAGAAGAAAATCAAAACGAAATTGTCTATTAACGGCGATTGTCTACCGCAGAAGAGGATGACGCTTAAGAACAACGGAGTTGGGAACGAGAGATTATGTGAAGATGCTGTGAAGGTGAACAAACCGAAACTGGACAACGAGTTGAAATCCTTAATGAACACAGTGACCATTGTCGAGAACTCCTACGTTTGCCCTTTCATTACATCGTTCAGCGATTACTTCTGCATCTACTGCAGGAATCTCTTCACTGAGCCGGAGGCTTTGAGAGAGCACACGCTCACCCATGACCCTGTAATGTATAGGGAAGCTGTTGTGAACAAACGTATCCTACAGATCGACACACACCGAGTGGACTGCAGACTGTGCCCGATGAATATAACTGACGTGGAATCGTTGAAGAAGCATCTAGAAGCTGATCACGGGAAAGTGTTCTATAAAACGTCGTACGACTGTCTGAAGTTCCGTTTGACACAGCAGAATCCAACTTGCACCGAATGTGGGGCTTCATTCAGTTTCTTCCATGCGTTAAAGAAGCACATGGCCGAGCATTTCGGGACTTGTATCTGTGACGTATGCGGTGCCCATTACTTTGATGAAAGGATGCTGGCCCTCCACCAGAAGACCCATCAGAAGATTGCAGAAACGTTTACATGCCACTGCGGGAAGGTTTTCAAGTCGAAACATGCCCGTTACCTCCACGAAGCGAGGATACACAAGAAAGAGGCAGCGTTCCAGTGTACTAAGTGTGATGCAGTGTTGTTCTCACATTCTATTCGGTACAGGCATATGATGGAAGTGCACGGTGTGAATAGAGTGTTCCCGTGTGAACAATGTGACCGCTCTTACATCAGCAGGAAATCCTTGAGGGAACATAATAGGAGATTCCATTTGAAGATCTTGAAGCATCAATGCGATCTGTGTGATAAGAGATTCTATCTCCCATCCCGGTTGAGGGAGCACATGGCAAGTCACACCGGTGAGAGGAATTACCGTTGTGAGTACTGCGGGAAGAGTTACCCGAGGATGAGAGGGCTGAAGGTGCACATGCTGTCTCATAATAGCGAGAAGAAATACGGTTGTCAGATGTGCAACGCTTCGTTCACACAGAACTGTAATCTTAAGAATCATATGAAGAAGCATCATGAGAGTTTGGATTTGGAGGAGTTTCGTGAATAA
Protein Sequence
MKDFKLDITNLPPHLDTSKISEKVKLKESLPAVIGFIEAMTLNESREKTLDQSTKYADKRKHSSDLPPKDVLLKQNNVNRFTAPLSPTEHIIVWKEGKSVAPKSANGNIVRRNSTFFQPIKGRYITVLGMYKENYKTNSRESIGERKEVINKYNQNDIQESGKTSEGEKETSGSDAIDKDLNPGMCRSCGTIKKCRLLNVEYEWCGQKEIYSDMFFDCFGLLLSNLDGEVEERLICATCVVRLRDSIQFRRQVLNCEEVLLKSKINPDTNELKPKQEVIIKEETNERDHEDSCHEDFVEDITDCCDEDKETEKPLVKLVKKKKYVDTEYNALQNAITIIENSYICPFLTIYSDYHCIYCKEMFIEPDVLREHTFTHDPRTYKEVIDNKKVLLVDIQRIECRLCPTKLDNIEELKCHLTNTHEKVFHAEAGNEFLKFVLKSGKMSCTQCDKSFNFFQALRKHMAEHFGSWVCDVCGAHYFEERLLVFHKKQVHKSDDEEVKMYSCVDCGKSFKSKKSRYFHVAKIHKNEPAYPCNKCDQVFLSYHLRYKHKMEEHGELRTFPCESCDKVYNSRKSLREHTRKNHLLLLKHECGHCDRKFYLPSQLKDHMTSHTGERNFRCEFCGKCYPRLKALKVHMESHSTEKKYKCSLCSAGYTQLNNYKNHLRMNRKGPLIDLGLCRCCGASKTCRIINMEYTWCGEKEIYSDMFFDCFGLLLSQLDGEPEDRLICAMCVARLREAAAFRKQVLECEQKLLQKTIHVHNTGRISSIVSNDTNELKPKQEVIIKEETNESNHEDSCHEDFVEDITDCCDEDKETEKPLVKLVKKKKYVDTEYNALQNAITIIENSYICPFLTIYSDYHCVYCKEMFIEPDVLREHTFTHDPRTYKEVIDNKKVLLVDIQRIECRLCPTKLDNIEELKCHLTNTHEKVFHVEAGNEFLKFVLKSGKMSCTQCDKSFNFFQALRKHMAEHFGSWVCDVCGAHYFEERLLVFHKKQVHKSDDEEVKMYSCVDCGKSFKSKKSRYFHVAKIHKNEPAYPCNKCDQVFLSYHLRYKHKMEEHGELRTFPCESCDKVYNSRKSLREHTRKTHLLLLKHECGHCDRKFYLPSQLKDHMTSHTGERNFRCEFCGKCYPRLKALKVHMESHSTEKKYKCSLCSAGYTQLNNYKNHLRNSDKNYLKNEMKEEMDENCIAPQEYDLGEGYDDDPIENGADRGNISNEVMKNELDRNVVISHEDNREGGYADDDPIEHDVEIIKNEIKIKKHKVVVRSRKKEKLKMSSKKKIKTKLSINGDCLPQKRMTLKNNGVGNERLCEDAVKVNKPKLDNELKSLMNTVTIVENSYVCPFITSFSDYFCIYCRNLFTEPEALREHTLTHDPVMYREAVVNKRILQIDTHRVDCRLCPMNITDVESLKKHLEADHGKVFYKTSYDCLKFRLTQQNPTCTECGASFSFFHALKKHMAEHFGTCICDVCGAHYFDERMLALHQKTHQKIAETFTCHCGKVFKSKHARYLHEARIHKKEAAFQCTKCDAVLFSHSIRYRHMMEVHGVNRVFPCEQCDRSYISRKSLREHNRRFHLKILKHQCDLCDKRFYLPSRLREHMASHTGERNYRCEYCGKSYPRMRGLKVHMLSHNSEKKYGCQMCNASFTQNCNLKNHMKKHHESLDLEEFRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-