Basic Information

Gene Symbol
-
Assembly
None
Location
GWHABGR00000047:14314312-14364765[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.22 14 6.6 1.3 1 23 134 156 134 156 0.98
2 24 0.28 18 6.2 0.1 2 23 224 245 223 245 0.93
3 24 0.15 10 7.0 0.7 1 23 249 271 249 271 0.96
4 24 0.0063 0.41 11.4 1.5 1 23 277 300 277 300 0.84
5 24 0.036 2.3 9.0 1.2 2 23 307 329 306 329 0.91
6 24 3.6e-06 0.00024 21.6 1.3 1 23 335 358 335 358 0.98
7 24 0.00075 0.049 14.3 1.5 1 23 364 386 364 386 0.98
8 24 4.1e-06 0.00027 21.4 1.8 1 23 392 414 392 414 0.99
9 24 0.22 14 6.6 1.3 1 23 720 742 720 742 0.98
10 24 0.28 18 6.2 0.1 2 23 810 831 809 831 0.93
11 24 0.15 10 7.0 0.7 1 23 835 857 835 857 0.96
12 24 0.0063 0.41 11.4 1.5 1 23 863 886 863 886 0.84
13 24 0.036 2.3 9.0 1.2 2 23 893 915 892 915 0.91
14 24 3.6e-06 0.00024 21.6 1.3 1 23 921 944 921 944 0.98
15 24 0.00075 0.049 14.3 1.5 1 23 950 972 950 972 0.98
16 24 4.1e-06 0.00027 21.4 1.8 1 23 978 1000 978 1000 0.99
17 24 0.68 44 5.0 1.0 1 9 1006 1014 1006 1014 0.94
18 24 0.0042 0.28 12.0 1.6 1 23 1251 1273 1251 1273 0.98
19 24 3.7 2.4e+02 2.7 0.1 3 23 1298 1319 1297 1319 0.93
20 24 0.0024 0.16 12.7 0.2 3 23 1342 1362 1341 1362 0.97
21 24 0.003 0.2 12.4 0.4 1 23 1366 1388 1366 1388 0.98
22 24 0.0067 0.44 11.3 0.3 1 23 1395 1418 1395 1418 0.96
23 24 0.00018 0.012 16.3 1.7 1 23 1453 1476 1453 1476 0.97
24 24 0.00039 0.025 15.2 1.4 1 23 1482 1504 1482 1504 0.98

Sequence Information

Coding Sequence
ATGGTATTTCTTGTTCGTGGTGATGCTAAACCGCCATTGAAGGTAGAAGAGAAACCCGTAGTAGACGTAAAAGATGATGCCCCGAAGATCATGAAGGGCGATGATGGCGGCGGAGCTAGCGACTGGACCGACTCTTCATCAAATTCCGATAAGCCGATACTGAGGAAACGGAAAGGGAAGAAGAAAAAGAAGACAGCGAACGGAGCACAGAAGAAGGAAAAAATCAAGTCGCCAAAGAAGAAAAAGTCCGGAGCTTCGACAAAGAAAAAGAGAGTACCGAAACCAGAAGTAGAGAAGAAGAACACATACGACAGAGATCTGGACTGCATGTCGGAGGAGAATCTCATAACGATCATTCAATACTCCTACGTCTGTCCATTCAAGAACAGAAGGAATAACTACTATTGCTTCTACTGCAAGGACTATTACCCGAAGCCGGAAGACTTACGTGAACACACCACGACCCACGACACGAAGCCATTCCAACTCCTAATGGGATATAAGAAGATGCCAAAATTAGATATAACCCGAATAGACTGTAAATTGTGTTCAGTGAAAATCAACGATTTGAACGTATTCAAGCAACATATAGACGAAGTACACGGCAAGAAGATATACTTCGAAGCACCGGATAAAATGTTACTCTACCGGTTAACGTGGAACGATTTAGTGTGTGTCATGTGCAACGATGTGTTCGAAGACTTCAATACGTTGAACACTCATATGGTGGAACATTTTAGTAACTTTACATGTGACGTGTGCGGTGTGTGTTTCCTCGAAAAGCCACGGTTGGACGCTCATCTCAAGCGGCACAAGGATGAGGAACGCCATACTTGTGAAGTCTGCGGTAAAGTGTTCAGATCGAATCACTATAAAGACATGCATGTCGATATAGTTCATAAGAAGAAGGCAATAATACGTTGCCCGAAGTGCGATGAATGTTTCATGTCATACGCTCTGAAGAATAAGCATTTGACCGAAGCCCACGGACAGAAGAGAACGTATCCTTGTAATTTGTGTGATAAAGTGTATAATAGGCAGAAGACGTTAACGGAACACCAGCGGAGGAATCATCAGAAAGTGTTGAAACACCAGTGCGAGTATTGTGAGCAGAGGTTCTATCTACCGTCTCGATTGAAGGAACATATGGCGATGCATACAGGCGAGAGGAACTTCCGCTGTGAGTACTGTGAGAAGAGTTATCCGAGGCTCAAGTCGCTACAATATCACATAAGGACGCATACAAACGACAGGAGGTACCGTTGTCATATATGCGAACAGAAGAACGGAAAGCAGAATGTGGATATAGAGCTGAAGGTGGAACCTAAAGATGACGATGATCATCATTCGATAGGTGGCCCGGACCTTGACGATGGAATGTCCGTAGACTATTCAGCTGATGATCTACCTACTGATGCTAAACCGCCATTGAAGGAAGAAGAGAAACCCGTAGTAGACGTAAAAGATGATGCCCCGAAGATCATGAAGGGCGATGATGGCGGCGGAGCTAGCGACTGGACCGACTCTTCATCAAATTCCGATAAGCCGATACTGAGGAAACGGAAAGGGAAGAAGAAAAAGAAGACAGCGAACGGAGCACAGAAGAAGGAAAAAATCAAGTCGCCAAAGAAGAAAAAGTCCGAACAGAAGAACGGAAAGCAGAATGTGGATATAGAGCTGAAGGTGGAACCTAAAGATGACGATGATCATCATTCGATAGGTGGCCCGGACCTTGACGATGGAATGTCCGTAGACTATTCAGCTGATGATCTACCTACTGATGCTAAACCGCCATTGAAGGAAGAAGAGAAACCCGTAGTAGACGTAAAAGATGATGCCCCGAAGATCATGAAGGGCGATGATGGCGGCGGAGCTAGCGACTGGACCGACTCTTCATCAAATTCCGATAAGCCGATACTGAGGAAACGGAAAGGGAAGAAGAAAAAGAAGACAGCGAACGGAGCACAGAAGAAGGAAAAAATCAAGTCGCCAAAGAAGAAAAAGTCCGGAGCTTCGACAAAGAAAAAGAGAGTACCAAAACCAGAAGTAGAGAAGAAGAACACGTACGACAGAGATCTGGACTGCATGTCGGAGGAGAATCTCATAACGATCATCCAATACTCCTACGTCTGTCCGTTCAAGAACAGAAGGAACAACTACTATTGCTTCTACTGCAAGGACTATTACCCGAAGCCGGAAGACTTACGTGAACACACCACGACCCACGACACGAAGCCATTCCAACTCCTCATGGGATATAAGAAGATGCCAAAATTAGATATAACCCGAATAGACTGTAAATTGTGTTCAGTGAAAATTAACGATTTGAACGTATTCAAGCAACATATAGATGAAGTACACGGCAAGAAGATATACTTCGAAGCACCTGATAAAATGTTACTCTACCGGTTAACGTGGAACGATTTAGTGTGTGTCATGTGCAATGATGTGTTCGAAGATTTCAATACGTTGAACACTCATATGGTGGAACATTTTAGTAACTTTACATGTGACGTGTGCGGTGTGTGTTTCCTCGAAAAGCCACGGTTGGACGCTCACCTCAAGCGGCACAAGGACGAGGAACGCCATACTTGTGAAGTCTGCGGTAAAGTGTTCAGATCGAATCACTATAAAGACATGCATGTCGATATAGTTCATAAGAAGAAGGCAATAATACGTTGCCCGAAGTGCGATGAATGTTTCATGTCATACGCGTTGAAGAATAAGCATCTGACCGAAGCCCACGGACAGAAGAGAACGTATCCTTGTAATTTGTGTGATAAAGTGTATAATAGGCAGAAGACGTTAACGGAACACCAGCGGAGGAATCATCAGAAAGTGTTGAAACACCAGTGCGAATACTGTGAGCAGAGGTTCTATCTACCGTCTCGATTGAAGGAACATATGGCGATGCATACAGGCGAGAGGAACTTCCGCTGTGAGTACTGTGAGAAGAGTTATCCGAGGCTCAAGTCGCTACAATATCACATAAGGACGCATACAAACGACAGGAGGTACCGTTGTCATATATGCGGAAAAAGTAAAGGCCCAATAGTAGACCCGGCGCTGTGCCGCTGCTGTAGATCCATAAAGAAATGTCGACTTTTAACAGCCGAATATGAGTGGATGGGGAATAAAGAAATATATTCCGATATGTTTATGGATTGTTTTGGGTTACTTCTATCCCATTTGGATGGTGAAAGCAAAGAGTGTTGTGTTTGCGCAACATGTGTGGTTCGGTTACGAGACGCGTGCGCATTCCGTCAGCAAGTATTACAGTGCGAGGAGGCTTTCTTGAACGCGAGACTCGAAAGTAAAGACGATAGCGTGGGTAAAGTCGAAGTAACAGTGAAGAGTGAACCGGTCGCGACAAACGATTACGATTCTACGGCGGATGATAGAGATGACTTGCCAACTGATATGGAACCCGAAGATTCGAAGTCATCATCAATTAAAGAACTAAATGATTGCATTGTTAACAAGAAGTGTAAGAGAGAGAGGAGAAGTAGATCGAAGGAGAAAACAAAATTGACTATGAGAAGGGATTTGTTAACAAAAATGAAGAAACTGAGGAACAAGTTGGATCATATGATAGAAAAACCAGTAAAATCGTTAGAGAAAAAGCAGAAATATCAAAATAGTAAAACGAAGAAATCATTACCCCTCGACCACGACCACATGGCTTATACAAACGCAGTGACAATCGTTCGAAACTCATATGTCTGTCCATTCCACAACCGTATCAGCATCTACTACTGCTATTACTGCAAGGACCAGTTCACGAATCCAAACGAATTGAGAGATCACACTCTCACCCATGACCCCAACGAGATGTTCGAAAGCATGATGGAGAACCGAAAGATACCGAAAATCGATATAACAAGAGTCGATTGCCGATTATGCGATGAGAAAATCGATACAATCGAATCGTTCAAAACCCACATCGCAAACGTTCACGGGAAACTGATACATCCAGTACAGAACGAGTTCCTGAAGTTCAAACTGAGTCTCGAGAACCTACTTTGTACGGAATGTGGCAACGGTTTCCCATATTTTGACCTCCTGAAAAAGCACATGATAGAACACTTCGGTACTTACATATGTGACGTCTGTGGTGCTTGTTTTCTAGAGCCAAATTCACTCCGGACCCATATAAAGTCACATAACAAAGTGGAAACCAATTTCCCTTGTGAGGTGTGCGGGAAGAATTTAAAATCTAAATACAGTCGGTATTTGCACATAGCGACTGTGCACGAGAAGAAGGCAACGGTGAACTGTTACAAATGTGAGGCCAGTTTCCTCTCCTATGCGTTGAGGAATCGACACCTGATTGAAGTCCACGGAGACAAGAGAACGTTTCCATGCAAGCTGTGTGACAAAGTTTATAATCGGAGGAAAACTTTAATGGAACATAACCGTAGGAACCATTTGAAGGTGTACAGGCATCAGTGTGATCTCTGCGATCAGAGGTTCTACCTCCCTTCGAGGTTAAAAGAACATATGGCTACGCACACCGGTGAGAGGAACTTCCGAT
Protein Sequence
MVFLVRGDAKPPLKVEEKPVVDVKDDAPKIMKGDDGGGASDWTDSSSNSDKPILRKRKGKKKKKTANGAQKKEKIKSPKKKKSGASTKKKRVPKPEVEKKNTYDRDLDCMSEENLITIIQYSYVCPFKNRRNNYYCFYCKDYYPKPEDLREHTTTHDTKPFQLLMGYKKMPKLDITRIDCKLCSVKINDLNVFKQHIDEVHGKKIYFEAPDKMLLYRLTWNDLVCVMCNDVFEDFNTLNTHMVEHFSNFTCDVCGVCFLEKPRLDAHLKRHKDEERHTCEVCGKVFRSNHYKDMHVDIVHKKKAIIRCPKCDECFMSYALKNKHLTEAHGQKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCEYCEQRFYLPSRLKEHMAMHTGERNFRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHICEQKNGKQNVDIELKVEPKDDDDHHSIGGPDLDDGMSVDYSADDLPTDAKPPLKEEEKPVVDVKDDAPKIMKGDDGGGASDWTDSSSNSDKPILRKRKGKKKKKTANGAQKKEKIKSPKKKKSEQKNGKQNVDIELKVEPKDDDDHHSIGGPDLDDGMSVDYSADDLPTDAKPPLKEEEKPVVDVKDDAPKIMKGDDGGGASDWTDSSSNSDKPILRKRKGKKKKKTANGAQKKEKIKSPKKKKSGASTKKKRVPKPEVEKKNTYDRDLDCMSEENLITIIQYSYVCPFKNRRNNYYCFYCKDYYPKPEDLREHTTTHDTKPFQLLMGYKKMPKLDITRIDCKLCSVKINDLNVFKQHIDEVHGKKIYFEAPDKMLLYRLTWNDLVCVMCNDVFEDFNTLNTHMVEHFSNFTCDVCGVCFLEKPRLDAHLKRHKDEERHTCEVCGKVFRSNHYKDMHVDIVHKKKAIIRCPKCDECFMSYALKNKHLTEAHGQKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCEYCEQRFYLPSRLKEHMAMHTGERNFRCEYCEKSYPRLKSLQYHIRTHTNDRRYRCHICGKSKGPIVDPALCRCCRSIKKCRLLTAEYEWMGNKEIYSDMFMDCFGLLLSHLDGESKECCVCATCVVRLRDACAFRQQVLQCEEAFLNARLESKDDSVGKVEVTVKSEPVATNDYDSTADDRDDLPTDMEPEDSKSSSIKELNDCIVNKKCKRERRSRSKEKTKLTMRRDLLTKMKKLRNKLDHMIEKPVKSLEKKQKYQNSKTKKSLPLDHDHMAYTNAVTIVRNSYVCPFHNRISIYYCYYCKDQFTNPNELRDHTLTHDPNEMFESMMENRKIPKIDITRVDCRLCDEKIDTIESFKTHIANVHGKLIHPVQNEFLKFKLSLENLLCTECGNGFPYFDLLKKHMIEHFGTYICDVCGACFLEPNSLRTHIKSHNKVETNFPCEVCGKNLKSKYSRYLHIATVHEKKATVNCYKCEASFLSYALRNRHLIEVHGDKRTFPCKLCDKVYNRRKTLMEHNRRNHLKVYRHQCDLCDQRFYLPSRLKEHMATHTGERNFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-