Aper015286.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHABGR00000022:8854471-8861677[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 4e-06 0.00026 21.5 3.1 2 23 95 117 95 117 0.95 2 14 0.00013 0.0084 16.7 0.6 2 20 124 142 123 143 0.94 3 14 0.00013 0.0085 16.7 1.7 2 23 154 176 154 176 0.91 4 14 0.00036 0.024 15.3 1.7 2 23 184 206 183 206 0.95 5 14 1.1e-05 0.00073 20.1 0.2 2 23 213 235 212 235 0.94 6 14 4.3e-05 0.0028 18.2 3.4 1 23 242 265 242 265 0.93 7 14 6.7e-05 0.0044 17.6 0.7 2 23 272 293 271 293 0.97 8 14 2.6e-05 0.0017 18.9 1.1 1 23 308 331 308 331 0.93 9 14 0.00021 0.014 16.0 2.5 2 23 340 362 339 362 0.92 10 14 1.6e-06 0.0001 22.7 1.1 2 23 368 390 368 390 0.97 11 14 0.26 17 6.3 4.7 2 23 398 420 397 420 0.91 12 14 4.4e-05 0.0029 18.2 0.7 2 23 427 448 426 448 0.97 13 14 1.3e-05 0.00087 19.8 0.2 1 23 454 477 454 477 0.96 14 14 0.037 2.4 9.0 2.0 2 21 486 505 485 506 0.93
Sequence Information
- Coding Sequence
- ATGGAAGAAGCTACTGTCAAAGTAGATGCTATAGATTATTCTGATGCTGAAGATAGTGAAAGTGAGGTACCTTTAGCATTTGCTTTCAAGAGAGATGTTTCTAACAATAGATCCAATGTTTTTGATGGCAATGAGTGTACTTCAAAATTGACTACTAAAACTGAGAAATTAAGTGAAAGCGAGTATGAGCAGAAGGAACATACAGAAGATAGCATTGATGAAGTGCCAGGCACAAGATTAAAGGATACTGTAAAACAAGTTAATAATAAGACTGATGAAGCATATTGCCAAATCTGCAACAAAAGGTTCAAGACAAATGCTAATTTAAGACAACATATAAAGCACATACATTCTGATGAGTATTTCGTTGAGTGTGATAAATGCGAGCGCACGTTCAAATCACGCGCACATCTTAAATCTCATGTGGACTGCGCTCATCCAAAACCCGGGACAGAAGCGAAGTGTGATATATGTGACAAGGTCTTCATAAATAAGAAAAAGTTGAGCAACCACAAGTACTATACTCATGCTACACCAGAGGAGAAAGTCACCTGCAAGCTCTGTAACAAAACATTTATGAAACAGTACAAATTAAATGTGCACAATCGTCAAGTACATGCATTGTATAGCAGTGTAACCTGTGACATTTGCGGGAAGCCCTTCAAGAATGAGATGCTTTTACGAAGACACGCAAAATGGAGTCATCCAACTGATCGGATGGATCACAAATGTGAAGAATGCGGAAAGGACTTTCCCTCCTGGAGACATTACAAAAAGCATAAAGAGAATGCACACTCTTTGTTAGATGGTTTAACATGTGATTTGTGTAAAAGGGTTCTGGCGAATAAGAAGTCCTTAGCAAGACATTTGAAGACGCACAGTTTAGGGAAAATCTTCAAGACGAAGCCGAAAGACGCTGAGTTCATATGCACGATATGCGAAAAGACATTTAGCAGTAAAACTTCTCTGTTCTGGCACAACGAGAAAGACCATTCAGAGACTTATCAACTCAGGAAGACTTGCCACATCTGTTCTAAGGATTTTTCTGATCAGCACGTCCTAAGACGGCACTTGGAAGCGGTGCATCCAATCGAAACAGCGACATGTAAGGTTTGCAATAAAATCTTCAAATCGGCATTAAATCTAGAGAGTCATATGAGGACTACCCACGCGCCTCCGGAAGCGGCGAAAACTTGCGACGTATGCCACAAGACATTCAAATGTGGGATGCATCTTCGTATTCACATAAGCGCGGTGCACCCGGCAGAGGGCTCTGTGGTGTGCGACATCTGTAACAGAACCTTCGTCTCGAAAAGGTATTTGTACTCGCACAAGAAGATCCACGTGAAAAAGAGAGAATTTGACTGTGGAGTTTGCGGGAAATCGTTCAAACGGCAAGTAGACGTTGGAAAGCATGTCAGGAAAGTTCACAAGAAACAAAAGACCACAGTTTCCCGATGCTTAAAGTGTAATTCGTGCTTCAGTAACGACGATGAACTGCATCAGCATATCATCAGCTGTACAGCTGGTGACACTAAGATTGAAACACTTAAAGTAATCAAAGTTGAGATCGTTGAGGAATGA
- Protein Sequence
- MEEATVKVDAIDYSDAEDSESEVPLAFAFKRDVSNNRSNVFDGNECTSKLTTKTEKLSESEYEQKEHTEDSIDEVPGTRLKDTVKQVNNKTDEAYCQICNKRFKTNANLRQHIKHIHSDEYFVECDKCERTFKSRAHLKSHVDCAHPKPGTEAKCDICDKVFINKKKLSNHKYYTHATPEEKVTCKLCNKTFMKQYKLNVHNRQVHALYSSVTCDICGKPFKNEMLLRRHAKWSHPTDRMDHKCEECGKDFPSWRHYKKHKENAHSLLDGLTCDLCKRVLANKKSLARHLKTHSLGKIFKTKPKDAEFICTICEKTFSSKTSLFWHNEKDHSETYQLRKTCHICSKDFSDQHVLRRHLEAVHPIETATCKVCNKIFKSALNLESHMRTTHAPPEAAKTCDVCHKTFKCGMHLRIHISAVHPAEGSVVCDICNRTFVSKRYLYSHKKIHVKKREFDCGVCGKSFKRQVDVGKHVRKVHKKQKTTVSRCLKCNSCFSNDDELHQHIISCTAGDTKIETLKVIKVEIVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00113478;
- 90% Identity
- iTF_00113478;
- 80% Identity
- iTF_00113478;