Basic Information

Gene Symbol
-
Assembly
None
Location
GWHABGR00000047:14059854-14083494[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 0.00014 0.009 16.6 1.3 1 23 1 23 1 23 0.98
2 31 0.15 10 7.0 1.1 2 23 28 49 28 49 0.95
3 31 5.5e-06 0.00036 21.0 0.4 1 23 54 77 54 77 0.96
4 31 0.11 7.5 7.4 1.1 1 23 133 155 133 155 0.98
5 31 0.92 60 4.6 0.6 2 23 183 205 182 205 0.94
6 31 0.00051 0.033 14.8 5.3 1 23 228 250 228 250 0.98
7 31 0.038 2.5 9.0 0.1 2 23 255 276 254 276 0.96
8 31 0.036 2.4 9.0 0.8 1 23 281 304 281 304 0.92
9 31 0.042 2.7 8.8 2.2 3 23 315 336 314 336 0.96
10 31 8.8 5.8e+02 1.5 1.9 1 12 342 355 342 359 0.65
11 31 0.027 1.8 9.4 0.2 1 23 394 416 394 416 0.96
12 31 0.38 25 5.8 0.1 2 20 444 462 443 464 0.93
13 31 0.00048 0.031 14.9 0.3 3 23 489 509 487 509 0.96
14 31 1.7e-06 0.00011 22.7 0.2 1 23 513 535 513 535 0.98
15 31 0.36 24 5.9 0.5 1 23 540 563 540 563 0.93
16 31 0.37 24 5.8 0.4 1 23 569 592 569 592 0.92
17 31 0.00017 0.011 16.3 0.7 1 23 599 622 599 622 0.98
18 31 5.8e-05 0.0038 17.8 2.3 1 23 628 650 628 650 0.98
19 31 2.8e-05 0.0019 18.8 3.1 1 23 656 678 656 678 0.98
20 31 1.5e-05 0.00098 19.7 1.8 1 23 684 706 684 706 0.98
21 31 0.015 0.99 10.2 0.2 1 23 810 833 810 833 0.96
22 31 0.00025 0.016 15.8 0.2 1 23 902 924 902 924 0.97
23 31 0.0001 0.0067 17.0 0.4 1 23 928 950 928 950 0.99
24 31 0.00021 0.014 16.1 0.7 1 23 955 978 955 978 0.96
25 31 7.2e-05 0.0047 17.5 0.5 2 23 985 1007 985 1007 0.97
26 31 0.057 3.7 8.4 1.1 1 23 1022 1044 1022 1044 0.98
27 31 0.0027 0.17 12.6 3.4 2 23 1086 1107 1085 1107 0.97
28 31 0.055 3.6 8.4 0.3 2 23 1111 1132 1110 1132 0.96
29 31 1.3 83 4.2 3.9 1 23 1137 1160 1137 1160 0.95
30 31 2.6 1.7e+02 3.2 3.6 2 23 1172 1194 1171 1194 0.92
31 31 0.0055 0.36 11.6 0.6 1 23 1200 1223 1200 1223 0.95

Sequence Information

Coding Sequence
TTCTCGTGTCATATATGTGATAAAGTGCTCCAAACGTTTATACTTTTGAATCGTCACATGAACGTACACTTCAGTAACGCCGTCTGCGAGACATGCGGCACTGGATTCATGACCCACCAACGTTTGCTCCAACATAAGGAGATACACCAACCGGGCGGTTATCCGTGTGCGAGGTGCGATAAAGTTTACACGACGAACTCCAATTTAAAATACCACATCGAGAAAGCCCACGAGATGTCGACTCGTACTCGGATGCTCCGGTGCCCGCACTGCAGCGAACAAATAAAGCAAGCGAAAGAGACGAGCCTGTGGCAACTGACGCTCGGAGAGAGGCGAAACGCTTCAATCTTCATTCAGAAAACAACAGTCCGACCTTTCATGTTCATGGGTTCCAGTTTCAAATGTTTCTTCTGTTTGAAATACTATTCAGATGTCAACGAGCTTCTAGAACATACTGCCACCCACGTAGTTACTGATAGACAATTGATTTTAGCGAAATATGTGCATAAAAGTAAAAGAAATCTACAAGTAGATATATCGGGATTAAAGTGTAGATTATGTAATATAGATTATCCAGATTTGGACTGCGTTAGAAATCATTTGGACCGCGAACACGGTGTGATCTTTTCAGAAGCATCGAACGGTATGACTGAGTACAATATGAGAATTGTCGATGGTATGTTCTCCTGTCACATTTGTAGTAAGACCTTTCACAGTTTTGCTACATTGAATTCGCATATGAACCTACACGTCGGTAAAGTTGTCTGCGAGACTTGTGGCGCAGCGTTCCAGAGCCAAATGCGGTTGCTCACACACAAAGAGACGCATCAGAGAAATAACTACGCGTGCAAATTTTGCGACAAAGTGTTCCTTAAAAGTAGCCAAGTGAAATATCACACTGATATTATCCACAAAGGGAGGAACAGGGTTAAAATGAAGAACTGTCCGTACTGTACGGAAACGTTCAGAGAACATTATACAAAAATGGTGCATTTAAAAAAGGTTCACGGTATCTCAAAGACATTTCAATGTCATATATGTGAATGTCCAAGGAGGACACGGAGTAGAACATCAAAGAAATACATTCGGTTATCAGTGAAAAAGACCTCAGATCTGACAGAGACAGAGACGATGTTGGACGCCGGGTTATTCCCTTTCAAGATCCGGAGCAATAGGACATTCTCGTGCTCAATATGCCCGGAGAAATCAACGAACCTGGACGATATACGGAATCATACATCGGAACACGACAAATCAAACTTACACATCGCCTTCAAGAAAATGATGTTCTCCAAATCCCAACGTTTCTACAAATCATCGAGCAGATTACGCTGCAAGATGTGCACGACAGACGTCTCCAACTACGAAGAGTTAAAACTGCATGTCGAGAACTGCACAAGGATGAAGTACGGAGCGAGGAAGTGGAACAAGCTGCCGTTCAAATTAGAGAAGGACCAGCTAGATTGTCCCGTTTGCAAGAAGACATTCTTGAATTATGTCAGTTTGAATACACACATGAACGTGCATTATCCGAATTATATATGTGAGAATTGCGGTAAGGCGTTCGCTTCAAAAGCGAGGTTACGTGGGCACATGAGGACCCATGAAGTGGGTACTTTTGCATGTCGATACTGTAATGCGGTCTTCGATAGAGTCACAAAACGAGAGAACCATGTATCGAAAGAGCATAAAGCCGGTGTAAGATATGCTTGCAAGCGGTGTAACATATCCCTCAGTTCGTTCTACGCGAGACAAAAGCATCTGGCTGAAGTTCATAATGAAGAGCTAAAGCGATACAAGTGCAAAGCGTGTCCCCAAAGCTACATCACACCAGGACACCTGTCCAGTCATGTACGGAGGGATCACTTGAATGAACGGAACCACAAATGTGAGAAATGTGATCTGGCGTTCTATACGAAGAATGCTCTCAAAATGCACATGATAAAGCATGATGGGGAGAGAATACACACGTGTCCGGTCTGCCAGAAGTCCTACCAACGGAAAAAAACCCTAAGAGAACACCTCAGGATACACAATAATGATAAGAGATTTGTGTGCACCGTCTGCGGAAGGGCCTTTACACAGAAATGTACGTTGAAAGGGCATCTGAAAGTGCATGAGAATCTCGACAAATTACGTTATGAATACCATGAAACAAAAATGAAGTGTAAGAAAAAAAATCAGAAAATGCAGAAAACTAAAGACGTAACGAGCTTAACGCTGCTTGAAGAACCTGTAGCGCTTGATAAATTCAACTGGAAAGATCCTATCCCATCGTCAATCACATGGAATGTTAAAATTTCTAAAAAATCATACGTGAATGAAAACAAACGGAGAAAAGAAACGGCTGAGGAAACATGGAAGGAAAACGCTATAATCGTCTTTGAAAATTCATTCGTTTACCCTTTCGTCCACACTGGTAATAAATATAAATGTTTTGTATGCTCCGAACCATATATCAATCCATTAGAACTGAAAGAACATACTGCAAAACAACATACTGTAAATAATATTAAAGAAGAGTTAAATAATAAAGTGCGGGATAAGAATATCAAAGTAGATGTTGCTTGTACGCAATGCAAAATATGCTTAGACACTCCGCAAAACTTAAACGCATTGATGAGACATTTAAAAGATCACGGGAAGAACATTGACTTAAACGCTCAAGGCAATCTGATTCCATTTAAACTTGGAGGTGAGTTTTTCGATTGTCAGATTTGCGGAGAAACCTATGTAAAACTACGACTCCTAATAATTCACATGAGCAAGCATTTCAACAATTATAGCTGTGAAATTTGCGGTTCTGTTTACATGACACTGACCCTGCTGAAGAGGCATTTGCAAACCCACCAAACTGGCAGTTACCCATGCGATAAATGCAGTAAAGTTTTCAATAATTCATCAAAAAGGATGCTGCATATGAAAGGCGTTCATATAAAACAACTGCCTCGGCGCTGTCCGATCTGCCCGGAGAGGTTTAACTCGAATTATCAAAGAACGAAGCATTTGCGTGTAGTCCATAACCAAAGCACTGCTAAGCCATTCTTTTACCAGCAAGCGAATTTTAAATGCTTCTATTGCAGCGAAGTATTTCCAGAGGTGCATTCGGTGCTGAATCATACAAATATCCACGTAACTCCTGATCAAACTAGCTTACTTAAACAGCATCTGAGGAAAGGCAAACGGGTGATCAAAGTCGACATATCAACGTTAAAATGTAAATTATGCGACCAAAGTTCAAACAATGGTCTCCTATCTTGTCATAAATGCGAAAAGAGATTGAACTCCTTCTTTCTTCTAAATCGACATATGAACGTGCATTTCAACGTGGTATGCGAAACATGCGGATTAGGGTTCATGTCGCACCAACGTCTGATCAACCATAGGATAGTTCACCAGAACGGTGTTCATAAATGCGAGAGATGTCAGGACGTATTCCCGACGAAACTGAAGCTCCGTTACCATCTGTATAAGAAGCACGAGGTGAATAATGCGAAGAAAACCAAACCGTTGAAGTGTCCACACTGTTTGGAACGGTTCTCGGAACATTACCGGAAGATGACGCACTTGAAGGAGATCCACGGTATAGCGTTTACGTTCGATTGCCAAACGTGTAAAGCGGTATTTCCAACAAGACGTGCATTAACCGAGCACACGACGAAACTGCACACGCAGAGGATACAGTGCAAGAGTCCACGGTCCGGTATGGAGGTTCTCGTGTTCGGAATGCGGCAGCGGGTTCCACAATCGAAACGAGTTCAACAAGCATATGAAACAGTGGCATCCTCAGTGGCAGTTTAA
Protein Sequence
FSCHICDKVLQTFILLNRHMNVHFSNAVCETCGTGFMTHQRLLQHKEIHQPGGYPCARCDKVYTTNSNLKYHIEKAHEMSTRTRMLRCPHCSEQIKQAKETSLWQLTLGERRNASIFIQKTTVRPFMFMGSSFKCFFCLKYYSDVNELLEHTATHVVTDRQLILAKYVHKSKRNLQVDISGLKCRLCNIDYPDLDCVRNHLDREHGVIFSEASNGMTEYNMRIVDGMFSCHICSKTFHSFATLNSHMNLHVGKVVCETCGAAFQSQMRLLTHKETHQRNNYACKFCDKVFLKSSQVKYHTDIIHKGRNRVKMKNCPYCTETFREHYTKMVHLKKVHGISKTFQCHICECPRRTRSRTSKKYIRLSVKKTSDLTETETMLDAGLFPFKIRSNRTFSCSICPEKSTNLDDIRNHTSEHDKSNLHIAFKKMMFSKSQRFYKSSSRLRCKMCTTDVSNYEELKLHVENCTRMKYGARKWNKLPFKLEKDQLDCPVCKKTFLNYVSLNTHMNVHYPNYICENCGKAFASKARLRGHMRTHEVGTFACRYCNAVFDRVTKRENHVSKEHKAGVRYACKRCNISLSSFYARQKHLAEVHNEELKRYKCKACPQSYITPGHLSSHVRRDHLNERNHKCEKCDLAFYTKNALKMHMIKHDGERIHTCPVCQKSYQRKKTLREHLRIHNNDKRFVCTVCGRAFTQKCTLKGHLKVHENLDKLRYEYHETKMKCKKKNQKMQKTKDVTSLTLLEEPVALDKFNWKDPIPSSITWNVKISKKSYVNENKRRKETAEETWKENAIIVFENSFVYPFVHTGNKYKCFVCSEPYINPLELKEHTAKQHTVNNIKEELNNKVRDKNIKVDVACTQCKICLDTPQNLNALMRHLKDHGKNIDLNAQGNLIPFKLGGEFFDCQICGETYVKLRLLIIHMSKHFNNYSCEICGSVYMTLTLLKRHLQTHQTGSYPCDKCSKVFNNSSKRMLHMKGVHIKQLPRRCPICPERFNSNYQRTKHLRVVHNQSTAKPFFYQQANFKCFYCSEVFPEVHSVLNHTNIHVTPDQTSLLKQHLRKGKRVIKVDISTLKCKLCDQSSNNGLLSCHKCEKRLNSFFLLNRHMNVHFNVVCETCGLGFMSHQRLINHRIVHQNGVHKCERCQDVFPTKLKLRYHLYKKHEVNNAKKTKPLKCPHCLERFSEHYRKMTHLKEIHGIAFTFDCQTCKAVFPTRRALTEHTTKLHTQRIQCKSPRSGMEVLVFGMRQRVPQSKRVQQAYETVASSVAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-