Basic Information

Insect: Antheraea assamensis
Gene Symbol: -
Assembly: GCA_035772565.1
Location: JAQQSE010000099.1:1209596-1229150[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0092 0.73 11.1 0.7 1 23 393 415 393 415 0.99

2 11 0.0019 0.15 13.3 9.3 1 23 422 444 422 445 0.94

3 11 0.39 31 6.0 3.5 1 23 449 471 449 471 0.97

4 11 0.071 5.7 8.3 1.8 1 23 476 499 476 499 0.97

5 11 0.01 0.83 10.9 0.2 1 23 503 526 503 526 0.94

6 11 2.7 2.1e+02 3.4 0.3 2 21 539 558 539 563 0.88

7 11 0.4 32 6.0 0.7 2 23 621 643 620 643 0.95

8 11 0.006 0.48 11.7 0.9 2 20 659 677 658 680 0.91

9 11 0.00017 0.014 16.5 2.1 1 23 686 708 686 708 0.99

10 11 8.3e-07 6.6e-05 23.8 1.1 1 23 715 737 715 737 0.97

11 11 0.00025 0.02 16.0 2.0 1 23 743 766 743 766 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0092	0.73	11.1	0.7	1	23	393	415	393	415	0.99
2	11	0.0019	0.15	13.3	9.3	1	23	422	444	422	445	0.94
3	11	0.39	31	6.0	3.5	1	23	449	471	449	471	0.97
4	11	0.071	5.7	8.3	1.8	1	23	476	499	476	499	0.97
5	11	0.01	0.83	10.9	0.2	1	23	503	526	503	526	0.94
6	11	2.7	2.1e+02	3.4	0.3	2	21	539	558	539	563	0.88
7	11	0.4	32	6.0	0.7	2	23	621	643	620	643	0.95
8	11	0.006	0.48	11.7	0.9	2	20	659	677	658	680	0.91
9	11	0.00017	0.014	16.5	2.1	1	23	686	708	686	708	0.99
10	11	8.3e-07	6.6e-05	23.8	1.1	1	23	715	737	715	737	0.97
11	11	0.00025	0.02	16.0	2.0	1	23	743	766	743	766	0.93

Sequence Information

Coding Sequence: atGCGGTGCTGTGTGACTGGATGTAAGAACGACTCCAGACGTATCTCAAAGTCTCAGGGGATCACTTTTCACGTATTTCCCAATGAACCTTCATTACGAAGCGCCTGGCTGAAATCTCTAGGTAAAGAGAAATGGGAACCCAAAGAACGCAGTGCCGTTTGTTCTGAGCACTTCCTCTCTGAAGACCTCTATGAGACTAGGAATGGTCTGAGAAAAGTCAAGGTTGGAGCTGTCCCTTTGATTTTGCAAGATTCACATGAGTGCGTATATGGAGATATACAAACATTAAAAGTTTGCAGGATCTGTCTGATCCCATGTTACGGGAAGATGTTATCACTGAGGTTAAGCAATTTGAAACAAGCTTACGAAGATCTCACCGGAATCACGTTGGAACTAGAGGACAAACTACCCCAGAAGCTGTGTCCGGAATGCGCGACACGTCTTCTCAGTCACGACCGCTTCCGAACGAGAAGTCTCAGAGCGAACTCAATCATGTTGGAAATACTGAAGAAACAATGTTACTTATCTGAAGAGAATCTAGCAACGGTGAACAGAGATAACAACGATCTCTCGTCACCGCTGAAAGCGAAGCATTACGCGCCGGATCATTACGACATGAATATAGAATACGATGAAGACACATATGAAAGTAAACCGATACAGCTAAATGTGGAAGTTGAAATTAAAAACGAATCggaaaatgatatgtttatCGATGAAGATGTCAGACGGGGTGAGGGGTCCGAAAATGTCAAACGGGGTGAACGGTCCGAAAATGTCAGACGGGGTGAACGGTCCGAAGATGTCAAACGGAGTGAAGGGTCCGAAGATGTCAGACGGAGTGAAGGGTCCGATGATGCCAGACAGAGCGAAGGGTCCGAAGATGATGATGTCGATGAAGATTTTAATGATTCCGATACGGATTGTACGTCCGATGATAGTTTACCATTAGAAAGGGCAAGGACGAAGAGGAAATTAAAGAAGAATGAAGATGTTACGATAAAGAAGAATCAGgtGAAGAAACCACCAGAAAAACCGAAAATCGATCGACGGCGGAAACCGTTCCTGGACAACGATCCCAATGAGATCCTGTTCACGATAACAGAGTTGACTGTCCAAGAACAAGTCGCCGAGATCGAGAAGCGACAGGAATCGTCGAACTATAAGAACGCCGTCTACCGATGCACAGAGTGCTATAAGGGTTATTTAGACGAAGACGCTTACAATAGCCACATGAACAGACACACCATCCAATGTGGTCAACATAAGTGCTCGATATGCAAAACGCACTTCAAGAACCAGCACGCGCTCCGGAAGCACATCACCGCTCACCACACGCAGCGGTTCAGTTGCAACCAGTGCTCGTATACCACCACGCACAGACAGACGGCGCGGCTGCACGAGCGATGGCACAAAGGTACTAAGTACCAGTGCCCCCACTGCCAGGATGAGTTcgtAAAATTCACAACATACATGGGTCATATAAGGATCAAGCACCCGTCGGATTTCGTTTGCGAGTTGTGCGGCTTCTCGTTCGTCAGTGCGAAAGGGATAGAGCTACACAAAAAACTGAAACACATGCTCGATGATGGTCTGGTACCGGAAGACGGTCCCTACTGCGAACTGTGCAACGTGAGATTCATCTCCGCGGAAGCTCACAAACAGCATCTGAACGTCTCCGGCCGGCACATTAAACCAGATGCCGCTAGAGGCAGGAAAGCGAACCAATCGAAAAGGAACAAGGGCCGGCAGGAGAAGGAGAGGAAATTAAGGGAGAAGAGAGAACGGGACAAGATGGAAAACGCGGAGAGGAACGGGGAAGTGTACCCGAAGCAATGGAGGAAAGTGGAGGGACCCTTACCTTGTGAACAGTGCGGCCTCCAATTGGAAGATTCGCGCGCATACCACAGCCATTTCAGACGGATGCACCCGGACAAGAATCGAACCAGCTACCCGTCCATGAAATCGCCTTGCATGTGCGAGGTGTGCGGTAGAATATTCCagAGTTACTCGCTACTGAAGGACCACCGCTGGGTGCACACGGGCGAGCGTCCGTTCAAGTGTGACCTCTGCGAGAAGTCGTTCAGGATGAAGCAGCGGCTCGTGTCGCACCGGCGCGTGCACGCGGACGCGCGCGCTCACTATCCCTGCGACCTCTGCGGGAAGAACTTCTCCACGCAGAGCAACCGCCAACGGCATATGTTTATACATACCGGATTGAAGCCGTTCAAATGCGAGATGTGCGGGAAGGGGTTCAAGCACGCGAGCGAGAAGCGAACCCACGTCACTTACGTGCACCTCAAGAAGCCCTGGCCCAAGCGCTCGCGGTCGAAGAGGCGGACCGACTCCAGACAGTGTTCGATGCTGCCCAACACGTCTGAACCAACAACGAACGCAAACGACAACTTAAACACGAACGAAATCGACACGCAACAGCCAATATGGCCGACGTGCGATACGAGACACATCCCCATTGACATAAACACGATAATTGAAGACAGACACATGTATTATAATTTGAGAATGTAA
Protein Sequence: MRCCVTGCKNDSRRISKSQGITFHVFPNEPSLRSAWLKSLGKEKWEPKERSAVCSEHFLSEDLYETRNGLRKVKVGAVPLILQDSHECVYGDIQTLKVCRICLIPCYGKMLSLRLSNLKQAYEDLTGITLELEDKLPQKLCPECATRLLSHDRFRTRSLRANSIMLEILKKQCYLSEENLATVNRDNNDLSSPLKAKHYAPDHYDMNIEYDEDTYESKPIQLNVEVEIKNESENDMFIDEDVRRGEGSENVKRGERSENVRRGERSEDVKRSEGSEDVRRSEGSDDARQSEGSEDDDVDEDFNDSDTDCTSDDSLPLERARTKRKLKKNEDVTIKKNQVKKPPEKPKIDRRRKPFLDNDPNEILFTITELTVQEQVAEIEKRQESSNYKNAVYRCTECYKGYLDEDAYNSHMNRHTIQCGQHKCSICKTHFKNQHALRKHITAHHTQRFSCNQCSYTTTHRQTARLHERWHKGTKYQCPHCQDEFVKFTTYMGHIRIKHPSDFVCELCGFSFVSAKGIELHKKLKHMLDDGLVPEDGPYCELCNVRFISAEAHKQHLNVSGRHIKPDAARGRKANQSKRNKGRQEKERKLREKRERDKMENAERNGEVYPKQWRKVEGPLPCEQCGLQLEDSRAYHSHFRRMHPDKNRTSYPSMKSPCMCEVCGRIFQSYSLLKDHRWVHTGERPFKCDLCEKSFRMKQRLVSHRRVHADARAHYPCDLCGKNFSTQSNRQRHMFIHTGLKPFKCEMCGKGFKHASEKRTHVTYVHLKKPWPKRSRSKRRTDSRQCSMLPNTSEPTTNANDNLNTNEIDTQQPIWPTCDTRHIPIDINTIIEDRHMYYNLRM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00114153;
90% Identity: iTF_00112559;
80% Identity: iTF_00112559;