Basic Information

Insect: Antheraea assamensis
Gene Symbol: -
Assembly: GCA_035772565.1
Location: JAQQSE010000055.1:448200-457994[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.019 1.5 10.1 0.4 1 23 323 345 323 345 0.96

2 12 0.011 0.9 10.8 2.1 2 23 353 375 353 375 0.96

3 12 0.0043 0.34 12.1 1.3 1 23 379 401 379 401 0.97

4 12 2.4 1.9e+02 3.5 0.2 1 23 406 429 406 429 0.96

5 12 0.24 19 6.6 0.2 1 21 436 456 436 459 0.89

6 12 0.057 4.5 8.6 0.2 1 23 471 495 471 495 0.92

7 12 0.0019 0.15 13.3 0.0 2 23 513 535 513 535 0.97

8 12 7.1 5.6e+02 2.0 0.3 3 13 556 566 555 577 0.83

9 12 0.0026 0.21 12.8 0.9 2 23 591 612 591 612 0.96

10 12 2.6 2.1e+02 3.4 0.0 2 23 618 639 617 639 0.90

11 12 0.00017 0.014 16.5 3.3 1 23 645 667 645 667 0.96

12 12 6e-06 0.00048 21.1 1.1 1 23 673 696 673 696 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.019	1.5	10.1	0.4	1	23	323	345	323	345	0.96
2	12	0.011	0.9	10.8	2.1	2	23	353	375	353	375	0.96
3	12	0.0043	0.34	12.1	1.3	1	23	379	401	379	401	0.97
4	12	2.4	1.9e+02	3.5	0.2	1	23	406	429	406	429	0.96
5	12	0.24	19	6.6	0.2	1	21	436	456	436	459	0.89
6	12	0.057	4.5	8.6	0.2	1	23	471	495	471	495	0.92
7	12	0.0019	0.15	13.3	0.0	2	23	513	535	513	535	0.97
8	12	7.1	5.6e+02	2.0	0.3	3	13	556	566	555	577	0.83
9	12	0.0026	0.21	12.8	0.9	2	23	591	612	591	612	0.96
10	12	2.6	2.1e+02	3.4	0.0	2	23	618	639	617	639	0.90
11	12	0.00017	0.014	16.5	3.3	1	23	645	667	645	667	0.96
12	12	6e-06	0.00048	21.1	1.1	1	23	673	696	673	696	0.98

Sequence Information

Coding Sequence: ATGCGTTTATGCAGTGTCCATTTTGACAACAACAAAATAAGCCGTGCAGGTTGTAGGACTAGAATTAAAGATGATGCTTGTCCTACAAAATTTCTACCAGTTAATTCTAACTTTGAAGCATCTTTCTTAGAAGTGTGCAGAATATGTTTGGCAACAGATATAAAGATGTATAGTCTACAAGATGAAATACTCCAGTCATGTGTTAGGAAATTTCATGGATTGATTAAAAATACTCATATAGAAGGAATGCCACAGTTTGTTTGCTATGAATGTGGAGCTTGTCTTATAAAGTTTTACTATCTAATGGAGAAAAGTATGATAGCACAAGCAACACTTCTAGATATATTTGCGAATAATGGAgagTTATCAATgaatttgattaaaaaacaaGATCGAAAGCAGCTCAATTTAAATTCGTCACTAGGTTATTGTAAAACAACccatatctataaatattcatatgatTGTGATGATAAATGTtcagtatttattaaaagtgaTAATAATGATGAGGATAATCTCAAAAGAGTTGGTAATGaatttcaaatagaaaatgATTTTGTAAGTGAAATATGGGAAGACACTCGGAAAGCtgatgtttttaaaaaaatagaaaatagagAAGAAGGCAAGACATTTAACGATATTGcaacaataaatagtaacaaACCAATAGAAGAGAATATTTCTGAAGTAAATGAAACAGATTGTATGTCAGGAGGTGATGATTTTTTAGATGATAATGACTCTCATGCCATTGTAATAGTGGTGAATGATGAAGTAAGTAGttttaataaaccGGAAAAGagatcaattataaaaaacaattccgAAAAGTTCAATGGGCTTACTCGTAGTGAAGTAAACATGCAGCAACACTTTGATATCGTGAAGTTATCAttACAGGAACAAATCGCAGAATGGAAGAGAGTTAGAGTTAATAGTACATTGACAAgtgcaaaaatatttaaatgcgaTATTTGTTTGAAGATATTCGCTCATGTACAACCGTATCGAAACCATATCGCCGGTCACGATCCTAGCCGCGGTAAAGAGGAATGTCCTGTATGTAAATTGCGTTTTAAGAATAAATTACTCGTGCAGTCACACAGGCGTCATGTACACGGGAATAAATTTTACTGCAAAAAATGCTCAAAAGTTTTCAATAATATTGCCGTCGCGAGGAAGCACTATCGATGGCACTCGGGGCACCGGTACAAATGCCGCTGGTGCGCGTTCACGAGCGCGCACGAGTCCGCGGTGGGAGCGCACGCGCGCGTGTCCCACGCGCACGGAGCCGGTACGTACGTGTGCGCGTTCTGCGGCGTGGCGTGCCGCTCCGCGCGGGGCCTCGCACTACATTCCTCCTTCGCCCATAAACATCAAGCGGAAACAGAAATAAGTAGCGAGTATAAATGCCAGTTATGTGACGTATATTTTGCTTCGGAAGGCGCTAGACGTGTACACTTGCTTACATCGAGACATAACAAGACAAGTTTGTGcgATTCCACATCCATTAGTACGGCTCTCAAAAATACATGCGATAAATGCGGCGTGAATTTACCATCTCCAGTTGAACTAAAAGTACATATGGAAACCGAGCATTGGAACGGTGTACGAAGGAAAAGCGGCTGGAGAAGACCCGGCGACTGCTACCCAATTTTATGTGAACATtGCGGAGAAACACTGAACAGTCGAAGAATACACTACTGGCACGTTCGGAGGCAGCATCCCAAACAGAAACATCTGTATCAACCAGTCATCACTGCCGTCTGTGAGATTTGCGGAAAGGGTTTTCAGAACTTGACTAAATTACACCTACACGAGTTACGTCACGGTCAGCCGACAGTGAAATGTGTTCGCTGCCCGCGGCTGTTCTACGACAAATACGCGGCCGCCATACACGGCGCCGTGCACGAACCCGAGAAGCCGCACTCGTGTCGCACTTGCGGACGCACCTTCAAGCTAAAGGGTAATCTGCTTAGGCACTCTAAGGTTCATTCTAGTGTCACGCCGTATGAATGTTCTATGTGTGggaaaaaattcaaatattcatATAGCGTAAACCTCCACGTGCGTACAGTCCACTACAAGATGCCATATCCGCCGCGAAAGAAGAGAAAGATCGCAAGAAAAAATGGTCATAGTCCAGATAaagataacattaatatttaa
Protein Sequence: MRLCSVHFDNNKISRAGCRTRIKDDACPTKFLPVNSNFEASFLEVCRICLATDIKMYSLQDEILQSCVRKFHGLIKNTHIEGMPQFVCYECGACLIKFYYLMEKSMIAQATLLDIFANNGELSMNLIKKQDRKQLNLNSSLGYCKTTHIYKYSYDCDDKCSVFIKSDNNDEDNLKRVGNEFQIENDFVSEIWEDTRKADVFKKIENREEGKTFNDIATINSNKPIEENISEVNETDCMSGGDDFLDDNDSHAIVIVVNDEVSSFNKPEKRSIIKNNSEKFNGLTRSEVNMQQHFDIVKLSLQEQIAEWKRVRVNSTLTSAKIFKCDICLKIFAHVQPYRNHIAGHDPSRGKEECPVCKLRFKNKLLVQSHRRHVHGNKFYCKKCSKVFNNIAVARKHYRWHSGHRYKCRWCAFTSAHESAVGAHARVSHAHGAGTYVCAFCGVACRSARGLALHSSFAHKHQAETEISSEYKCQLCDVYFASEGARRVHLLTSRHNKTSLCDSTSISTALKNTCDKCGVNLPSPVELKVHMETEHWNGVRRKSGWRRPGDCYPILCEHCGETLNSRRIHYWHVRRQHPKQKHLYQPVITAVCEICGKGFQNLTKLHLHELRHGQPTVKCVRCPRLFYDKYAAAIHGAVHEPEKPHSCRTCGRTFKLKGNLLRHSKVHSSVTPYECSMCGKKFKYSYSVNLHVRTVHYKMPYPPRKKRKIARKNGHSPDKDNINI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -