Aass007609.1
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- -
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000037.1:32328-38212[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00041 0.033 15.4 1.4 1 23 291 314 291 314 0.96 2 11 0.88 70 4.9 6.0 1 23 328 350 328 350 0.91 3 11 1.4e-05 0.0011 20.0 2.8 2 23 356 377 355 377 0.97 4 11 0.0004 0.032 15.4 0.7 1 23 381 404 381 404 0.95 5 11 0.023 1.8 9.8 0.6 1 21 407 427 407 428 0.94 6 11 0.00098 0.078 14.2 0.1 3 23 508 528 507 528 0.96 7 11 0.17 13 7.1 0.1 2 23 548 570 547 570 0.93 8 11 1.4e-05 0.0011 20.0 7.3 1 23 576 598 576 598 0.98 9 11 0.0027 0.22 12.8 1.5 1 23 603 625 603 625 0.97 10 11 0.00089 0.07 14.3 4.6 3 21 633 651 631 654 0.94 11 11 0.0074 0.59 11.4 0.5 3 23 694 715 692 715 0.89
Sequence Information
- Coding Sequence
- ATGGAGGACATTTATCCGAATTTGATCACGGGCAATATAGTGTGCCCGATTCTGTTATTGCCAAAAAAGTGTACGGCTTTGGAAACGAATTGCGATATAACGGACACTGTATTCCTGAACATGAAGATAACGTCCCTGGATACAGAAAATAACGAACTTTGCATATACACAGGTTTGTGCAATATAAAATTAgtggatatatataaaatcaatgtcGAGTCTGTTGATAGTTCTGAAAGCAACGTATCAATACCGAACTCATTCGATGACACACAAGTTTATCAAGCGGACAACCAGTCACAAGTATGGATTGATCCAATCAGAAGCCCACATGTATACAACCAGTATGATGGAGAGAATTGTCAAGAGCTTTATATGTTGTCGCAAGACAATAACACCAAGCATATCACTGTCGAACAACATAACACGTACATAacccaaaatatttataattacaatgaatCTACGGACACGTCATCCGATTTCGAAAGTAGGAAATCCAAAAGGAGCGACACGTTTAAGAATTACTCTTCCGATTCGAATTTATATTCGAATGAGTTCGATTGTGAAGGATATCAGCCGCAGTTAGCGGAAGAATTTGTTAGCGAGAAGGGCGAGATAAGGGCGAGAGATGATAGGAGACAAATAGGTGTGCAGAGTGAGAATAGTGCTTTAAAACAACTGATGTCCACAAATATACAGTCCGCTTCTAAACAGAGGAAGACGATTCTGTTTCTAGGTCAGGACTCGCAGTGTGGGCAAACAGTTCAAAAAATATCCATCGACGACCCATTACTGGAATGCGTTGGGAACGGCGTCATCGACCATGAAGTTATTATTGATGATACGTTGAATAAAAGTCATAAGAGATACCAGTGCGACAAATGCAAGCAAATATTCGAACAAATATCCACGTTCAGGCAGCACATGGTCAGCACGCATAGACACGACACGTGCAACAAAATACTAGGAGATTTCGAATACCTTTGCAGAGAGTGCGGAAAGCATCTCAAGAACCAGAACAAGTTCGAGCAGCACTGCATGAGGCATGGCGACCCGGACCTCGAGTGTAACAAGTGCCACAAGGTGTTTGCTTCCAAGTTCACACTCCGTGCCCACCGCAAGATACACAATAGGAAGTTCCCGTGCAAATTCTGCACCAAATCCTATTCTAACGATGAAGAATTGAAATCGCATTTAGTAAAAGCACATTGTATCTTCTCGTGCGATATTTGCCGTTACACTACGAAGACTTGTACAGAATTAGACGCACATCAGATTATATGTAAATCTCCGGTGTCGCTCGAACCGAATGAGACGGATTCGGTTGACGACATTTCCAGCGAATCGATTACCTCTACGCCTTCATCTGTGGACAGGGCATTGATGTTGGAACAAGCAGAGCTAGCCAAAATTGAGCAAGTCAAGGAAGCTGATACCGTTTTAGCTAAAGTTATGTccaataagatttttttattaaatgccaGTAAAGCGAGGGAGGATCGAAGATTTAAAAAGATTTGCGATGTCTGTTATAAAAACTTTGACCGAATTGGTGATTTAAAGCGTCATCTGATAGAGCATATCATAAAGAGTACCTTTGCCAAAACACCTGTCACCAGTGACGGAACCCTGAGCATCGTCTGCGGAGTCTGTGAAGCGGAGACCTTCACCAAGGTCGACAGTTACAAAGCACACCTGCGCGAACACGCCAAGCTTACCCTATACAAATGCACGTTCTGCAACAAGTGCTTCAGTGATTCGAGCAATTTCTCCAAGCACAAGAAAATACACGGTAACACATATTTTCAATGTGACCTCTGCCAGAGGAAATTCAACTCTAAAAAGATGATAGCACAACACTTGGAGTACCATAACATCACGTCACCGGTGAACTGTCATTACTGTGGTAAAATGTTCTACTTCACATCAATGCTTAATAAGCATATTAAATGCACTCACACCAAGAATATGTACTCCAGATATAGATGTAGGTTTTGCTTCAACTACTTCAAAACTTTGAAAGACAAGTGGGATCACGAGTGGTCCGTGCATAGTGTGAGGAAGTCGATTATCGACTGTCCCATTTGTGCGTCCAAGTTTAGGAAATATTCGGAATTGAAAAGACATTACTACGACAATCATAGAATGGCTGTTTTGCCGAATAAGAAGGTTTTTATGAATGAAGCGCGAAAATATTAA
- Protein Sequence
- MEDIYPNLITGNIVCPILLLPKKCTALETNCDITDTVFLNMKITSLDTENNELCIYTGLCNIKLVDIYKINVESVDSSESNVSIPNSFDDTQVYQADNQSQVWIDPIRSPHVYNQYDGENCQELYMLSQDNNTKHITVEQHNTYITQNIYNYNESTDTSSDFESRKSKRSDTFKNYSSDSNLYSNEFDCEGYQPQLAEEFVSEKGEIRARDDRRQIGVQSENSALKQLMSTNIQSASKQRKTILFLGQDSQCGQTVQKISIDDPLLECVGNGVIDHEVIIDDTLNKSHKRYQCDKCKQIFEQISTFRQHMVSTHRHDTCNKILGDFEYLCRECGKHLKNQNKFEQHCMRHGDPDLECNKCHKVFASKFTLRAHRKIHNRKFPCKFCTKSYSNDEELKSHLVKAHCIFSCDICRYTTKTCTELDAHQIICKSPVSLEPNETDSVDDISSESITSTPSSVDRALMLEQAELAKIEQVKEADTVLAKVMSNKIFLLNASKAREDRRFKKICDVCYKNFDRIGDLKRHLIEHIIKSTFAKTPVTSDGTLSIVCGVCEAETFTKVDSYKAHLREHAKLTLYKCTFCNKCFSDSSNFSKHKKIHGNTYFQCDLCQRKFNSKKMIAQHLEYHNITSPVNCHYCGKMFYFTSMLNKHIKCTHTKNMYSRYRCRFCFNYFKTLKDKWDHEWSVHSVRKSIIDCPICASKFRKYSELKRHYYDNHRMAVLPNKKVFMNEARKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114410;
- 90% Identity
- -
- 80% Identity
- -