Aass025399.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Antheraea assamensis
Gene Symbol
-
Assembly
GCA_035772565.1
Location
JAQQSE010000242.1:108103-119799[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0047 0.37 12.0 0.6 3 23 132 152 130 152 0.96
2 11 0.0019 0.15 13.3 2.7 1 23 261 283 261 283 0.99
3 11 2.9e-05 0.0023 19.0 0.4 1 23 289 312 289 312 0.97
4 11 0.0014 0.12 13.6 4.1 1 23 317 340 317 340 0.94
5 11 6.8e-05 0.0054 17.8 0.4 2 23 500 521 499 521 0.97
6 11 0.00022 0.018 16.2 3.3 1 23 527 549 527 549 0.98
7 11 0.27 21 6.5 4.9 1 23 611 633 611 633 0.96
8 11 0.0017 0.13 13.4 6.7 1 23 668 690 668 690 0.98
9 11 8.8e-06 0.0007 20.6 0.4 1 23 697 719 697 719 0.97
10 11 0.00077 0.061 14.5 2.9 1 23 728 750 728 750 0.99
11 11 0.0078 0.62 11.3 0.1 3 21 798 816 797 817 0.95

Sequence Information

Coding Sequence
ATGAACGGCATGGCCACAGAGATAGACCCTCTCGGTTCATTTGAGTATCCTAATTATGACAGCTATGGTAATATCACAACACCATATAACTATGACAAAAAAGTCGACGGCCCAGTACCGTATAATTTTAACCAAAACTACAATATAGTCTTGCCAAATAATATAGCACTTATTGGTAATATTACAACCAATGTACCTGATATAAATGTTGAGAAAAGTTTAGAAATCCCAGTGGTTGATAATTGCATAGGAACAGATAATTCTGATGATAAAATTGTTAATGATATTAAACCCATTGTAACAGATGGGAAGATCAAACAAGAAAAGGTTAAAGGTAAACGCAGTACCTATTGGTCAGTGAAAATAGCAGATAAAGATTTTGCGTTCTATGGATGTTCAGTATgcaatattagttttaaaacacTTCAAGAATTAGATCACCATGTCACTGTACATAAGGATAGAATAACAAGCTACGATCTCCGAGTGCAGAATCAGATGAAGAGGAAAAGATTAAAGAAGGAAAAGAAggtacacaaaataaaattagagaaGCCTGACATAGAAATAGAAATTAAACCGGAAGATGGGTATATAGGCACAGAGAAAGCAAGTGAATTCAGTGAAAATAGTTTAgttagtaatgaaaataatacagaTAGTAATAAGAATGAAATAGAAGATAAGAGTGATGAGAAAAAGGGTAGAAGTAAAGAGAAGAAAGTGTGTAAAAGTATGGAGAAAGGGGAAGAGGAGAAGAATAAAGATCTACAGaagatatataaatgttttgctTGTCAGAAGCAATTTACACTAAGCTATTATTTGAGGTTGCATGTAAGATCTCACACAGATGAAAAACCGTATACATGCTCGGTATGCGGTCAGTCATTCATCACGGCGAGCAAATTGGGTAGGCACAACAAGAGGATACACTTAGCTATAAGATACCAGTGCAGGATATGTTTTAAGTTCTTCTCCCAGTTCGATCTTTTGACCAGACATTTTGACAAAAAACATGTGGAGGATAAACTGGAAGGGGAACCTTATGactACAACGCCATCTTACCGTATTTGAAGGAACTAGAAGAGCAAATGAAGGAGAAAACGGAAGCCGAGAAGAAACCGAAAATAGAAGAACTGTGGCCTGATAAGTGGGTGGGAGATGATCAAGCCAATGATCTACAAGTCGAGCAAAGTCAGCCGGATCAGAGCTCAACCTGGAACCCTAAACAATTCTTTAGTGTCATCAGTCGCTCCCCAGATATAGTAATTGATGAGGTAACTGTTCAGGAGGAAGACTTAGTGAAGCAGGAGCTCGAAGACGATGACCTTGTGAGGGATGATCCTCACGAGATCGATTATAAGGATGACAGTTGCTCTGATGAGGATTACTTCCCATCGAACACGTGGGCGAGGGTCTCCCCGCCCCGGCTGGAGCCGGAGACTCCGCCCTCGCCACGACGAACTCGAAGGTCGAAAGGCGACGGCCCTATCACATGCGATATCTGCCAGAAGACTATCAGTTCGGTCACTTACCTCAGGATCCATATGAGGACGCACACTGGAGAGAAACCATTTAAATGTTACATATGCAATCGTGGGTTTATCACGTCCAGTAAGATGCACCGACACGTCTTAACGCACTCGGAGACTTGGGACGAAACGATCGTAAAACGCGAGGAATTGAAAAGTGAGGGAGAGGGGAACGAAGAGGATTTCGAGGAGGACGTGAAAGGaaaaaaagtaaaaaaatcaaaatccaAGTTTCACAAGAAACGACAGAAGAAAGGTCCAGAAAAACAGAAGAAGAGATACCAGAAGAGGCCTCACGCCTGCGAGTTCTGTCAGAAGAGGTTTCTCCATCTGGAGACTCTGCAAGTCCACAAGAAGTCCCACGAAGGTGAACCTCTCGTGCTGAAGTGTAACTACTGCCTCGAGGAGATGCCGGACGAGGCAGCTCGTAGCGAGCATGAGGCATCACATTCTGGACCGAAGCCCTATGTATGCACGTTGTGTGGCAAATGCTATAAGAAGAAAGAAACATTGGTGTATCATAGGAAACACCATAAACCGGACAAACGAGAGTATATATGCGACATATGCTCGAAGCGTTTCAACTCTCCGGGCAAGCTGCAGCGCCACCTGGTGTCCCACCGGGTAGACAAATTCGTTTTGCGATACGAGTGTCCCGTCTGCGCTCACATGTTTAACACTAAATACCACGTCCAGATGCATTTGTCGACGCATCAGAAGGAAGGCCTgATAATGGAGGAAAATCGTAATGAAATCCTGGCGATGGTGCTGCAGAACGCGAGGAAGTTCCCGAAACAACCTGATGCACCTTCAAACCTGACCGACACGATGCCCTCGGATGAGCGTAGCCGGATCTGCAACATCTGCGGGGAGATCTTCCAACATTTCTACTACTTAGAGGAGCATCTCAAGGGTCCACGGTTCGAGGATAGCGATCGAGGACCTCAACAAGCCAGAAGAGAAGAAGTACACATGTCAAGTCTGCAAGAAGAGCTTCAAGCTGCACTATTACCTAAAGCTGCACAGTTTTACGCACACGAAGGAGAAGCCATTCATATGTCAGCAGTGCGGTAA
Protein Sequence
MNGMATEIDPLGSFEYPNYDSYGNITTPYNYDKKVDGPVPYNFNQNYNIVLPNNIALIGNITTNVPDINVEKSLEIPVVDNCIGTDNSDDKIVNDIKPIVTDGKIKQEKVKGKRSTYWSVKIADKDFAFYGCSVCNISFKTLQELDHHVTVHKDRITSYDLRVQNQMKRKRLKKEKKVHKIKLEKPDIEIEIKPEDGYIGTEKASEFSENSLVSNENNTDSNKNEIEDKSDEKKGRSKEKKVCKSMEKGEEEKNKDLQKIYKCFACQKQFTLSYYLRLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAIRYQCRICFKFFSQFDLLTRHFDKKHVEDKLEGEPYDYNAILPYLKELEEQMKEKTEAEKKPKIEELWPDKWVGDDQANDLQVEQSQPDQSSTWNPKQFFSVISRSPDIVIDEVTVQEEDLVKQELEDDDLVRDDPHEIDYKDDSCSDEDYFPSNTWARVSPPRLEPETPPSPRRTRRSKGDGPITCDICQKTISSVTYLRIHMRTHTGEKPFKCYICNRGFITSSKMHRHVLTHSETWDETIVKREELKSEGEGNEEDFEEDVKGKKVKKSKSKFHKKRQKKGPEKQKKRYQKRPHACEFCQKRFLHLETLQVHKKSHEGEPLVLKCNYCLEEMPDEAARSEHEASHSGPKPYVCTLCGKCYKKKETLVYHRKHHKPDKREYICDICSKRFNSPGKLQRHLVSHRVDKFVLRYECPVCAHMFNTKYHVQMHLSTHQKEGLIMEENRNEILAMVLQNARKFPKQPDAPSNLTDTMPSDERSRICNICGEIFQHFYYLEEHLKGPRFEDSDRGPQQARREEVHMSSLQEELQAALLPKAAQFYAHEGEAIHMSAVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-