Aass020098.1
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- Zfy2
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000129.1:254656-261985[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 2.3e-06 0.00018 22.4 0.5 2 23 189 211 189 211 0.96 2 16 8.7 6.9e+02 1.7 0.0 10 21 231 242 228 243 0.90 3 16 0.0011 0.089 14.0 3.9 1 23 255 278 255 278 0.97 4 16 0.00023 0.019 16.1 2.1 6 23 289 307 287 307 0.95 5 16 0.00068 0.054 14.7 0.5 1 23 318 341 318 341 0.96 6 16 0.87 69 4.9 0.5 5 23 351 370 349 370 0.89 7 16 1.6e-06 0.00012 23.0 2.8 1 23 377 400 377 400 0.98 8 16 0.024 1.9 9.8 1.6 6 23 411 429 409 429 0.96 9 16 1.3e-05 0.001 20.1 2.6 2 23 437 459 436 459 0.96 10 16 0.023 1.8 9.9 1.4 6 23 470 487 468 487 0.95 11 16 8.1e-05 0.0065 17.6 2.6 1 23 499 522 499 522 0.98 12 16 0.051 4 8.8 1.0 6 23 533 551 531 551 0.96 13 16 0.0027 0.22 12.8 2.9 2 23 562 584 561 584 0.96 14 16 0.13 10 7.5 2.8 5 23 594 613 592 613 0.94 15 16 0.0024 0.19 12.9 2.8 1 23 625 648 625 648 0.98 16 16 0.0065 0.51 11.6 1.2 5 23 658 677 656 677 0.92
Sequence Information
- Coding Sequence
- atggaTAACAGAGAACGTTTAGTATCTACTTGTGATGTATTACGAACAACAACTGAAGAAAGGCATTTGCATCTTGAGATATCTACACTGacaataaaaaaggaaacagCTGAAGGCATTGATGATGAAGAATCACCTGTTAATGATTATATgtATCCTTATGGGCACCTGGAGTCAACAGAGTGTGTAAATCACTATGACAATAAGGATTATGTATTGCAACAAGTAGGGAAGCAATTCTCTGAGGAGGAATGCCCCCCACAAGGGGGCAGTGATAATAGTAAAATAGTTGCTGAAGATAAGGAATTACTAAAAGTCATAGACAAACAAAAAGTAGAAACTGGAAACACCAGTGAGGGAATCTTATTCAATATGAAAACTGAAGTTGTGGATAAAAACTATgagattacaataaaaatggaaacatcAGAAGAGCAAGAAATATTAGATAATAGTGTAGACACCAATACACAGTATGATATGCTGTTAACCCCTCAAGAAATTCAATGCAATTCATCTGATACAACATTCAGAAAGAATGATGTTCATAAGACAGCAAACCCCAAATGTGAATTATGTGGAAAGCAATTCAAGAGTGAAAAGAATCTTGAACGTCACATCctagttttacataaaaaaaagaagtctcCAGAGGGAGTAACTCCAAACAGTGTGGAATATAATGCTGATTTCAAACAGGAGTACAGTTTGAATGAACATATAAAGTTATGTCGTCCTGGTTTCGAAATTAAGAGAATAGTGCATAAATGTGAATTTTGCGAACGCATTTATAAAAGCAAACAAACTTTAACGATGCATATAAAGAGAATGCATTATGATTATGGGAAGACGTTCGATTGTTGGTGCGGGAAGGAGTTCCGTTCTCCATTACACCTGCGTAAACATATGAAGATGCAGCACGAATCcaaatttacaaatgtaaaatcAGAATACAAATGCAAACGATGCGAggcagtttttaaaataaaacaaggttTAAAAGATCACATGAAAGGAGTTCATTATAAGAATGGTGAAACGTTTAAGTGTTGGTGCGGGAGACAGTTTTATTCATCGATAAAGCTATCAGCGCATGAAAGCTTGCGGCACTATGGAAATCAAGAACAATTCCAGTGTGACTCATGTGGGAAGATTTTTAAAAGGAAAGCACATTTGGTCAACCATATAAAGAGATTTCATTATGATTATGGGAGGTCGTTTGAATGTTTCTGCGGGGAACAGTTCTGTTCACCTATACTTTTAAATCAGCACAGAAGACGACAGCACGATCCCAAACCCGATAGAGTGCGATGTGACACGTGTCACAAGtcttttaaatctaaatcaagTTTAGCTCTCCATGAAAGGAGAGTTCATTATGATTATGGGAgattatttgaatgtttttgCGGGAAACAGTTCCGTTCAccattatatttaaaccaacACAAGAAGTTACACGAGCGAAAAGCTGAGGATACGGACAAGGGTAGATTCCAATGTGACTTGTGTAAGaagttttttaaaaagaaaccATATTTGGTCGtgcatataaagaaatatcattaTGATTATGGGAGATTGTTTGAATGTTTCTGCGGGGAACAATTCTATTCACCGATGCTCTTAAATCAGCATAAGAGGCGGCGGCACAATAACAAGATTACAAATACGGATACATTGCAATGTACTACGTGCCAAAAGTTGTTTAATACGAAAGTATGTTTAATGGCGCACGTAAAAAGAATGCATTATGATTATGGGAGAACGTTTGAATGTTGGTGCGGGAAACAATGCCGCACACCTTTACACCTACAGGAGCATAAAAGGTTGCGACACTATCGCAAGATGAATAACGCAAATAATGAGCTATACCAATGCGACTCGTGCCAGAAGTTGTTCAAGAAGAAACAATGTCTCGTCGTACATATAATGAGGATTCATTATGATTATGGGAAGACGTTTGAATGTTGGTGCGGAAAACAGTTCCGGTCGCCGATACACCTGAAAATACATAAGAAGGCACGGCATGGTCAATTGTAG
- Protein Sequence
- MDNRERLVSTCDVLRTTTEERHLHLEISTLTIKKETAEGIDDEESPVNDYMYPYGHLESTECVNHYDNKDYVLQQVGKQFSEEECPPQGGSDNSKIVAEDKELLKVIDKQKVETGNTSEGILFNMKTEVVDKNYEITIKMETSEEQEILDNSVDTNTQYDMLLTPQEIQCNSSDTTFRKNDVHKTANPKCELCGKQFKSEKNLERHILVLHKKKKSPEGVTPNSVEYNADFKQEYSLNEHIKLCRPGFEIKRIVHKCEFCERIYKSKQTLTMHIKRMHYDYGKTFDCWCGKEFRSPLHLRKHMKMQHESKFTNVKSEYKCKRCEAVFKIKQGLKDHMKGVHYKNGETFKCWCGRQFYSSIKLSAHESLRHYGNQEQFQCDSCGKIFKRKAHLVNHIKRFHYDYGRSFECFCGEQFCSPILLNQHRRRQHDPKPDRVRCDTCHKSFKSKSSLALHERRVHYDYGRLFECFCGKQFRSPLYLNQHKKLHERKAEDTDKGRFQCDLCKKFFKKKPYLVVHIKKYHYDYGRLFECFCGEQFYSPMLLNQHKRRRHNNKITNTDTLQCTTCQKLFNTKVCLMAHVKRMHYDYGRTFECWCGKQCRTPLHLQEHKRLRHYRKMNNANNELYQCDSCQKLFKKKQCLVVHIMRIHYDYGKTFECWCGKQFRSPIHLKIHKKARHGQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -