Aass023463.1
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- -
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000189.1:114036-121504[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.44 35 5.8 0.2 1 23 84 106 84 106 0.93 2 21 3.5 2.8e+02 3.0 0.1 2 23 131 153 130 153 0.91 3 21 0.046 3.7 8.9 1.6 1 23 175 197 175 197 0.99 4 21 0.00029 0.023 15.8 4.3 1 23 201 223 201 223 0.98 5 21 0.0037 0.29 12.4 0.1 1 23 228 251 228 251 0.90 6 21 0.0075 0.6 11.4 1.4 1 23 257 280 257 280 0.96 7 21 5 4e+02 2.5 0.0 1 13 286 298 286 302 0.83 8 21 0.79 63 5.0 0.1 1 23 371 393 371 393 0.93 9 21 0.002 0.16 13.2 1.2 1 23 434 457 434 457 0.95 10 21 0.17 14 7.1 4.0 1 23 463 486 463 486 0.92 11 21 0.0044 0.35 12.1 0.4 1 23 492 515 492 515 0.97 12 21 0.023 1.8 9.9 0.8 1 23 521 543 521 543 0.97 13 21 0.5 40 5.7 1.2 1 23 604 627 604 627 0.93 14 21 0.17 13 7.2 6.7 1 23 693 715 693 715 0.95 15 21 0.0001 0.0081 17.3 1.1 1 23 719 741 719 741 0.98 16 21 0.0052 0.41 11.9 0.5 1 23 746 769 746 769 0.94 17 21 0.00011 0.0089 17.1 2.8 1 23 775 798 775 798 0.98 18 21 0.033 2.6 9.4 1.3 1 23 805 828 805 828 0.95 19 21 0.00016 0.013 16.6 0.9 1 23 834 856 834 856 0.96 20 21 2.2e-06 0.00017 22.5 0.6 1 23 862 884 862 884 0.99 21 21 5.4e-06 0.00043 21.3 3.8 1 23 890 912 890 913 0.96
Sequence Information
- Coding Sequence
- ATGGGCAGCAGAAGATGGAATACGGATGCGATGTTTGCGGAAAATCTTTTGAGACGAGTTCGAAACGCGCCGTACATTACAGGATGCACCATACACCGGCGGAAAAgaATCGGCGATGAGGCAGCGGAGAATACCGCGGTTAAAATTATATGGAAACGTAAGAAACTTATGATCATAGAAGACAAAGCGAACGCAGTTGTAATATTAAAGAATTCAAACGCAGTCGTATTCAGGTATCAGAGGGGGAAGTTTATGTGCGCCTACTGCCCGCGTATATGCGTCAACGTTGCTGAAGTACGGGTGCACTCGACTATCCATAACAAGTTGGATATCTTCGAGAACCCTGAAGTACGTAACTCATTCCCCCTGAGGGTCGACGTGACGGATTTGTCGTGTGCGATCTGCAACGAGTCTGTCCAAACTCTTGATATACTAAAGTTACATTTGAAAGACAAGCACTCTTTGGATGTAAATCCGAAATACACGGACGGTGTGATACCTTTTGTTTTGACGGAGAGAGATTACAAGTGCGTCCACTGTGGTGCCCTCTACGAGGGTTTCATGAGTTTATTTACCCATATGAATAAGCACTATCAGAGTTTCGTTTGTCATACCTGCGGCAAAGGTTATTCGGCGAAGCACAAACTGCGTGCGCACAGAATGAGGCACGAGTCCGGTCAGTTCCCGTGTTCGCGATGCGGTCAGGTGTTTTCGAACCGGCCTGCGAAGAATCGGCACGTGGCAGCGGCTCACGCGCGCAAAGAGAAGTACCGTTGTCCGGTCTGCGATGAATACTTCGATTCCTATCACTCACGTTTACGCCATTTAGATAGGGTTCACGATCAGAAAGCGGAGTATAAGTGTGCCTTGTGTCCTGCAGTCTTCGGAACGGCTAATTTACGTAAATATGCAACAAACTCCATCTATTCACAAGAACGGTTCAGAGTCACGCCTAAATTATCACCTTTACAgagatttcttttgtttttaggCTCCGTCGATCTGAAAGTTAAATGGAAACCGAAGCGTCAATATAACGATCACAGAGATAATGCAGCGATTATTATCAAGAACTCCAACGTTTGCCCCTTTAGGTGGAAACGCGGAGCGTTCGCTTGCGCTTACTGCCGCCTCTCATTCGGCGACTTTGCCGGTGTCAAGGACCATACTATAGAACATCCGAACAGGGTCGAAGTCCTCCGTTTGGCGAGAACATTTGCCAACATAAAAGTCGAGGCTTTCTCCACTCATCACAGATTAAAGGCACACCTCACGATCCACGATGCTGAAGATGGCAAACATAAATGTACAAAGTGCAATGAAGTTTTTCCATCACAAGCTCTGAAGAACAGACACGTGGCGTCACAGCACGGTCCAGTGACTCGCTACAAATGTCCCTTTTGCAGTGAAACCTTCAAAAGTTACCACCGCAGGGGAAAACATTTGAAAGAATTACACAACAAGAAAGTGGAGTATCCTTGCACAATTTGTCCGGCTGTTTTCGCAATGTGCAACCAAAGGACGAAACACATACGAGAAGTGCATGTAAAGCAGAAGACGTTCTCGTGCTCGTACTGCTCTGATAAGTTCGTCACGGCGGCTAGGTTGAGGAATCACTTGGTGAAGCATATCGgaAGACAAAATGAGAAAATACATCTAAAGCGCGAAGTGGATTGTGTGACGGAGAATGAGACGGCTGTAGTCGCGACGACGCGCGACGGTGACGACAGGAGGTCGATATTTAGAAATAACATAGCGATTATAATGCAATCGTCCTCCGCTTACCCTTTCAAGTATAGGAAAGGCACGTACCTTTGTTTCTTTTGTAAGAGCAGCTTCATGGAACCGGAGAAGTTGCGCGAGCACACGCGCGATCAGCACTCCGATTTCAGACAGCTCAAGCCGCGTAAATACGAACCTTTGAAGATGGACTTCGCTATGATACACTGTAAGCTCTGCGGCTTAGATATACCGAATTATCTAGCTTTGAAGTTTCATTTAACAGTTGAACACGGTAAGGTAATTGACTCGTCGTACGGAGAAAGTGTCCTACCATATAAACTGAACAAGAACGAGCACTGTTGCCAGATATGCGGGAAGCGTTACGAGATGTTCCTGAGCCTTCACAAGCATATGAACGACCATTACGAGTACTTTATATGCGAGACGTGTGGCAAAAGGTTCGCGACCTCGCAGAGGATGGTCAATCATACCAGAACGCACGAGAGAGGCGAGTTCCCATGCAAGAAATGTACGGAATCGTTTACATCCTATTCAGCGAGATACGCTCATGTCGCCAAAGTGCATAAATCAAATAAACGGTACAAATGTCCCATATGCGACGAGAAGTTCTCGTCCTATAAACACAGGTTGAAGCATCTGAGTACGGTGCACGGGGAGAAGACCGCTGTATTCCCGTGCCCGTCCTGCCCGAAGGTGTTCGACTTGTGTAGTCGGAGGACTGCACATATACGCTTTCAACACTTACAGGAACGGAAGCATGTTTGCCCGGTGTGCGGCATGAAGTTCTTCACGAACTACGAACTCCAGGAGCATTCGATAAAGCACGGCGGCGAGAGGATCTACCAATGCGACGTGTGCAAGAAAGCGTACGCTAGGCTGAAAACGTTACGGGAGCATATGAGGATTCATAACAACGACAGGAGGTTCACCTGCCCGGTCTGCGGTCAGTCGTTCATACAGAACTGTAGTTTGAAACAGCACACTAGGGTTCATCATCCGACGAACCTGAAGGATGTGTTCTGA
- Protein Sequence
- MGSRRWNTDAMFAENLLRRVRNAPYITGCTIHRRKRIGDEAAENTAVKIIWKRKKLMIIEDKANAVVILKNSNAVVFRYQRGKFMCAYCPRICVNVAEVRVHSTIHNKLDIFENPEVRNSFPLRVDVTDLSCAICNESVQTLDILKLHLKDKHSLDVNPKYTDGVIPFVLTERDYKCVHCGALYEGFMSLFTHMNKHYQSFVCHTCGKGYSAKHKLRAHRMRHESGQFPCSRCGQVFSNRPAKNRHVAAAHARKEKYRCPVCDEYFDSYHSRLRHLDRVHDQKAEYKCALCPAVFGTANLRKYATNSIYSQERFRVTPKLSPLQRFLLFLGSVDLKVKWKPKRQYNDHRDNAAIIIKNSNVCPFRWKRGAFACAYCRLSFGDFAGVKDHTIEHPNRVEVLRLARTFANIKVEAFSTHHRLKAHLTIHDAEDGKHKCTKCNEVFPSQALKNRHVASQHGPVTRYKCPFCSETFKSYHRRGKHLKELHNKKVEYPCTICPAVFAMCNQRTKHIREVHVKQKTFSCSYCSDKFVTAARLRNHLVKHIGRQNEKIHLKREVDCVTENETAVVATTRDGDDRRSIFRNNIAIIMQSSSAYPFKYRKGTYLCFFCKSSFMEPEKLREHTRDQHSDFRQLKPRKYEPLKMDFAMIHCKLCGLDIPNYLALKFHLTVEHGKVIDSSYGESVLPYKLNKNEHCCQICGKRYEMFLSLHKHMNDHYEYFICETCGKRFATSQRMVNHTRTHERGEFPCKKCTESFTSYSARYAHVAKVHKSNKRYKCPICDEKFSSYKHRLKHLSTVHGEKTAVFPCPSCPKVFDLCSRRTAHIRFQHLQERKHVCPVCGMKFFTNYELQEHSIKHGGERIYQCDVCKKAYARLKTLREHMRIHNNDRRFTCPVCGQSFIQNCSLKQHTRVHHPTNLKDVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -