Aass023514.1
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- -
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000189.1:408427-410831[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.002 0.16 13.2 4.3 1 23 10 33 10 33 0.95 2 19 0.00074 0.059 14.6 2.4 1 23 37 60 37 60 0.96 3 19 0.0029 0.23 12.7 1.0 2 23 63 85 62 85 0.96 4 19 0.87 69 4.9 0.3 2 19 91 108 91 110 0.93 5 19 0.0088 0.7 11.2 3.3 1 23 160 183 160 183 0.96 6 19 0.89 70 4.9 0.2 2 23 212 234 211 234 0.92 7 19 0.00042 0.033 15.3 0.2 1 23 256 279 256 279 0.96 8 19 7.7e-07 6.1e-05 23.9 0.3 1 23 284 307 284 307 0.95 9 19 0.0018 0.15 13.3 1.0 5 23 315 334 312 334 0.93 10 19 0.00011 0.0085 17.2 1.5 2 23 340 362 339 362 0.95 11 19 0.00021 0.017 16.3 3.5 1 23 366 389 366 389 0.97 12 19 0.023 1.9 9.8 0.4 2 23 396 417 395 417 0.96 13 19 0.059 4.7 8.6 0.8 1 20 423 442 423 444 0.87 14 19 0.0023 0.18 13.0 3.0 1 23 491 513 491 513 0.96 15 19 0.026 2.1 9.7 0.8 1 23 585 608 585 608 0.96 16 19 0.00015 0.012 16.7 0.5 1 23 613 636 613 636 0.96 17 19 0.00085 0.068 14.4 2.8 1 23 641 663 641 663 0.98 18 19 6.4e-05 0.0051 17.9 0.5 2 23 666 688 666 688 0.97 19 19 7.5 6e+02 1.9 2.0 1 15 694 708 694 710 0.78
Sequence Information
- Coding Sequence
- ATGAATAACGAACATCCGATTAACTGCTTCCTATGCCATGAGTGTGAGCAGACCTTTAACAAGAAGAGAGATCTTGATCATCACGTTAGGGTGTATCATAGGAAGCAGTATTCATGTCTGAAATGCTTTGCAATCTTTACTTCGAATTCCGAGCTCCAGCACCATCGTAAGAATGCTCATGTTTCCACTTGTAATATCTGTTTTAAAACATTCTCTTCGGAGGTGCAAAGGTTAGGGCATATGAAACGGGATCACGAGACCGATGGCGCTGAATGCGGATTTTGTCATAAAGTTATGACCACCAAACAAGGTTTTTTACGACACGCGGCACAATGCACTATCAAAGAGAACAAATGTTCCGAAACGATTGTTGTGGAAGACGATGATAGGAAACAGTCTGTCAAGGAGATAAGGAATGATATCGCCTCGGTATTGAACAAGTCTACAGCCTTaccctttaaatattttatgaacaggTTCCGATGCTTCTACTGTTCGAAAGACTTCCCGCTATGTGATTCATTGAAACAGCACACTGTCACTGAACATCCCCATTGCGACATCACTTTTAAATCTATGAGACTACGTAACAGGTATGAGGGGATGCAGATCAAAGTCGACACGTCTAGTCTATCTTGCAAGCTTTGCTTCGAAACTTTAGACGACTTGAACGGTTTATTCGAACATTTGACGTCAGAACATAAGACTCGTCTCGACAGATCCGTAGGCGAACATATGCAGGCTTTCAAATTGATTGAGGACAATTTCCCGTGCCCATTTTGCGGTGAAGTGTACAGATATTTCGGCTTACTCCTACGACATGTCAGTAGGACACATACggacaataaatttatatgtacgtACTGTGGTAAATCTTTTAGAACGAATCCGAGCTTAAGAGCGCACGTCGTAACGTGGCATAATTTTGGCAGGCATAAGTGCGACTGTGGGCTCGTTTTCACGACGAATAATACCCTAAAAGTTCATATGGGGAGAGCACATGGCACGAAGGTTGTCCAGTGTACTGAATGTCAGGAGAAATTTACAACGCATTACTGGATGAAGAGGCACATGTTGGAAGCGCACGATGCCGGCCATAAGTGTTCCCACTGTGGTAGGGTGTATGTTAAGAACTCTGCAATGGTGAACCATGTCCGGCGGTTCCATCTGAAGGAGAGAAACGTGGAATGTTCCGTCTGCTTGGAGAGGTTCTTTGACGCACAACGACTTAAAACGCACATGGTGAAGCACGTTGGAGAAAGGAACTTTCATTGTGATATTTGCGGGAAAAAGTTTCTGTGGAAGAAAAATCTTAGAGGGCACATGTCCAATACTACAGACTACAGCAAGAAACGTTTCTTTTCAGATGAATACGGGCCCTACGAAGGGTGTACATCTGAGCGTCGCAGGAAAAATTTGAGAACTCTCTTCAACTATACGACCGTAATGCCATTCAAATGGCGTGGGAGGTACCTGTGTTTCTATTGCGGCAAAACGTACACAGAATACTTGGAGTTCAAAAAGCACACTAAATCTCACGGACCTTGCACCACGAAAGATTACtcgttgaaaaaaataaaagggaATCATGTCGAGATAAAGGTCGACGTGTCGGAAGTAGCTTGCGATATTTGCATAGAACCGTTCGAGAGTCAGTCGGTCAGTGAAATCGTTGACCACCTAATCGTCAAACATAACTTAGAATATGACAAGAGTGTAGACATCCCGTTCCAAGAGTACAGACTCGAGGATTTTCGCTGTCTGTTTTGTGAACAACAGTTCTCTTATTTCGGATATCTCGTTAATCACGTGAACAACGCTCATCCGCAGAACAGTTACATTTGCGATGAATGCGGTGTTAGTTTCAACAAGAAGCGGGACCTAGCGTTACATTTTAGGAATTACCATAGACAGGGCGGTTATCCTTGCGACCAATGCTTGCAAAGCTTCGAAACCTTTCACCTATTACGTCGACATCAGAATAATCACTTTCGACAGTGTAACAACTGTGGACAGCGTTTTGCATCCCTTACTTTCTTGCAAAAGCATATCCAAGTCGATCATCCCGACAACGGTAgttacaaatgtaattattgctTCCAAAGAACTCCATTCCGCTCAGGGTTTAAACCAGCACATAAGTAA
- Protein Sequence
- MNNEHPINCFLCHECEQTFNKKRDLDHHVRVYHRKQYSCLKCFAIFTSNSELQHHRKNAHVSTCNICFKTFSSEVQRLGHMKRDHETDGAECGFCHKVMTTKQGFLRHAAQCTIKENKCSETIVVEDDDRKQSVKEIRNDIASVLNKSTALPFKYFMNRFRCFYCSKDFPLCDSLKQHTVTEHPHCDITFKSMRLRNRYEGMQIKVDTSSLSCKLCFETLDDLNGLFEHLTSEHKTRLDRSVGEHMQAFKLIEDNFPCPFCGEVYRYFGLLLRHVSRTHTDNKFICTYCGKSFRTNPSLRAHVVTWHNFGRHKCDCGLVFTTNNTLKVHMGRAHGTKVVQCTECQEKFTTHYWMKRHMLEAHDAGHKCSHCGRVYVKNSAMVNHVRRFHLKERNVECSVCLERFFDAQRLKTHMVKHVGERNFHCDICGKKFLWKKNLRGHMSNTTDYSKKRFFSDEYGPYEGCTSERRRKNLRTLFNYTTVMPFKWRGRYLCFYCGKTYTEYLEFKKHTKSHGPCTTKDYSLKKIKGNHVEIKVDVSEVACDICIEPFESQSVSEIVDHLIVKHNLEYDKSVDIPFQEYRLEDFRCLFCEQQFSYFGYLVNHVNNAHPQNSYICDECGVSFNKKRDLALHFRNYHRQGGYPCDQCLQSFETFHLLRRHQNNHFRQCNNCGQRFASLTFLQKHIQVDHPDNGSYKCNYCFQRTPFRSGFKPAHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -