Aass007674.1
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- Znf131
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000037.1:1126352-1127848[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0003 0.024 15.8 0.0 2 23 102 123 101 123 0.97 2 12 0.0077 0.61 11.4 0.9 1 23 129 152 129 152 0.97 3 12 0.011 0.89 10.8 0.1 2 23 177 198 176 198 0.97 4 12 5.5e-06 0.00044 21.3 1.8 1 23 204 226 204 227 0.96 5 12 0.00066 0.052 14.7 1.5 1 23 234 256 234 256 0.98 6 12 6.9e-06 0.00055 20.9 1.1 1 23 262 284 262 284 0.97 7 12 0.00013 0.011 16.9 0.3 2 23 291 312 290 312 0.96 8 12 1.6e-05 0.0013 19.8 2.8 1 23 318 340 318 340 0.98 9 12 1.1e-05 0.00088 20.3 0.6 3 23 348 369 347 369 0.97 10 12 0.00069 0.055 14.6 0.7 1 23 399 422 399 422 0.92 11 12 0.00096 0.076 14.2 0.2 1 23 428 453 428 453 0.97 12 12 1.2e-05 0.00094 20.2 2.7 1 23 459 482 459 482 0.97
Sequence Information
- Coding Sequence
- ATGCCGGACTCTATTTGTGAAACGTGTGCTAGAGATCTTTTAGTTTCTTACGAATTTATTACCAAATGCGAAACATCAGACGCTGCCTTGCGCTGTCTTTCCCCCAGCAATAAACAAAGTTACGACTTCAGTGAAGAGAATATTAAACGTGAAGCATTCGATGATTTTGCTTATTCTATACATGATCAAAATGCAGACTTATCTGATGATTTTACTTCTCCGACTTTTGATAGTtcagtaattattaataaaagtagaaataaaaaaactcagaaaagaaaaaaaaagaaatcagaGCCAGTTGAATGTGATATTTGCGGAATTAAAGCCACGCGTTATTCAGTTCTAGAAAGTCATATGAGGGTACATACTAAAGATAGACCATTTACTTGTAATCTGTGTGACTCTGCATTTATCCTAGAAAAAACGTTATATCGCCATGTAAAGTCTAAACATGATAAAGGTTTAGGTAATGTGAATAAAGTTAAAGATTATTTCAGGAAACCTAGACCAAAAATAGGACCTATACAATGTGTTATGTGTGGCTTAATGGTCCAGAGCAAATCTGCAATGGAAGCTCACAATCGTACCCACACCGGTGAGAAACCATTCAGATGTGACTTGTGTGATTTGACATTCAATGTAAAAGGTTCACTCAAAAAGCACATTGAAACGCATCATCTGGAGAGAGAAAGAAAATTTATATGTGAGACCTGTGGTTCTAGTTTCTTTCGTAAATGTGAAATTATAGCACATATAAGGAGACACACTGATGAAAGACCATATTCATGTGAACTCTGTCCAAAATCGTTTCGACAAATTTCCTCATTGATACGTCACAAGTATTCACACACAGGTGAACGCAGACAATCCTGTCCCATATGCTTAAAAATGTTCTATGATAAATCAGCTATAAAGAAACACTTGTCAGTCCATAGCGATGAAAGAAAGTACAGCTGTCACTTGTGCAACAAATCTGTTAAGAGTAAAAGCTCATTAGCAACGCATTTAAAGTTGCACtctaatgaaaaacaaaacatatgtaATTTCTGTGGTATGGCTTTCTCCTTAAAAGGTAACCTGCAGACTCATATACGTAGGAAACATTCAGAGAAGTCTGGCCCATGTTTGGTGTGCATGAAAACATTCCCAGATATAGAGGAGCACATGCGTAAACATACTGGTGAGAAACCGTTTGCATGCAAGTTGTGTGATCAAGCTTATGCAACAAAACGCAGTCTCACTTACCACATTATATTCAAACATGAAAATGCTGAGAAATTTAAATGTTCTATAGGAGAATGTACAAAGACTTTTCCCACTGGGAAGTTGCTAGAAATTCACTTAATTAAATACCACACAAATCATACACCCTACATTTGCCCACATTGCTCAAGAGGATTCTTTCGTACTAGTGATCTTACGAGACATCTCAAGAGTAGTCATATGGATAcaacaaaaattacattaaaaacaaatgtctTGGAAATTAAATAG
- Protein Sequence
- MPDSICETCARDLLVSYEFITKCETSDAALRCLSPSNKQSYDFSEENIKREAFDDFAYSIHDQNADLSDDFTSPTFDSSVIINKSRNKKTQKRKKKKSEPVECDICGIKATRYSVLESHMRVHTKDRPFTCNLCDSAFILEKTLYRHVKSKHDKGLGNVNKVKDYFRKPRPKIGPIQCVMCGLMVQSKSAMEAHNRTHTGEKPFRCDLCDLTFNVKGSLKKHIETHHLERERKFICETCGSSFFRKCEIIAHIRRHTDERPYSCELCPKSFRQISSLIRHKYSHTGERRQSCPICLKMFYDKSAIKKHLSVHSDERKYSCHLCNKSVKSKSSLATHLKLHSNEKQNICNFCGMAFSLKGNLQTHIRRKHSEKSGPCLVCMKTFPDIEEHMRKHTGEKPFACKLCDQAYATKRSLTYHIIFKHENAEKFKCSIGECTKTFPTGKLLEIHLIKYHTNHTPYICPHCSRGFFRTSDLTRHLKSSHMDTTKITLKTNVLEIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01316599;
- 90% Identity
- -
- 80% Identity
- -