Aass023532.1
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- -
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000189.1:492021-495166[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.54 43 5.5 0.7 1 23 77 100 77 100 0.89 2 20 0.44 35 5.8 0.0 2 23 128 150 127 150 0.95 3 20 0.0034 0.27 12.5 1.9 2 23 173 194 172 194 0.96 4 20 0.038 3 9.2 0.0 1 19 198 216 198 218 0.95 5 20 0.00014 0.011 16.8 3.2 1 23 225 248 225 248 0.97 6 20 0.031 2.4 9.5 1.0 1 23 254 277 254 277 0.91 7 20 1.1e-05 0.00087 20.3 1.3 1 23 284 307 284 307 0.98 8 20 0.022 1.8 9.9 2.1 1 23 313 335 313 335 0.96 9 20 9.3e-05 0.0074 17.4 1.1 1 23 340 362 340 362 0.97 10 20 0.13 10 7.5 2.1 1 13 368 380 368 382 0.90 11 20 1.1 89 4.6 2.2 1 23 462 485 462 485 0.94 12 20 0.41 32 5.9 0.3 2 23 512 534 511 534 0.94 13 20 0.0033 0.26 12.5 0.9 2 23 557 578 556 578 0.97 14 20 0.00038 0.03 15.5 0.1 1 23 582 604 582 604 0.98 15 20 0.27 22 6.5 0.6 1 23 609 632 609 632 0.96 16 20 0.43 34 5.9 4.2 1 23 638 661 638 661 0.91 17 20 0.00078 0.062 14.5 3.2 1 23 668 691 668 691 0.97 18 20 0.00056 0.045 14.9 0.5 1 23 697 719 697 719 0.94 19 20 8.2e-06 0.00065 20.7 1.0 1 23 725 747 725 747 0.98 20 20 4.4e-06 0.00035 21.6 1.8 1 23 753 776 753 776 0.98
Sequence Information
- Coding Sequence
- atggGCTTCGTTTTCTTTGTAGGTGACGAAGAAAGTGAATTTGACGACACTGTTATCATAGTGGTAAGCAGTAAAGATGACAACAAAAACGACCGTAACAATGTAGGTGATAGTGTTATCAGCGACAAAGCTAAAATGAGAGACCAGATGCAGAAACATAAGGTGAACTTAAGGCATATACTGAAGTATTCGAATGCCACGCCAATATTGCGACATATCGGTATCGGATACTTGTGTAGTTTCTGCGCCGCCCATTTCCTAGATCCGTCTGATCTCAAAAAGCACACGTTAGACTTACACGGACATAATTTCAATCCGCTCACTTGCCACAACAAAAGCAGACGAATAGACTATTATATCAAATTGGACATCACCTCGTTACAATGCAGTCTTTGCAGCGAGGAAATTGAAACTCTCGAAGAGCTGATAGACCATCTAATCAAATATCATGACGTGCATTTTTACACTGATATCAAAAACCAAATACTGCCGTTCAAATTTAACGGAGAACAGCTGAACTGTTTCATATGTGGTAGGGAGTTTAAAAAATTCAAGGTCCTCCAGGAGCATATGCACGTCCATTACAGAAATTTCGTTTGCGAGATCTGCGACGCCGGTTACGTGAATGCCGGCGGGCTGTACAGACACGCGGAGTGTCACGACAACGGTTCGTACAAATGTAAGCACTGCCCAAAGGTTTTCAATACGCCACGTAAGAAGAAGTCTCACGAGAGAGTCGTTCACATGCAAACGGTGTTGTACAGGTGCGGTTACTGCTTCAAAATATTCAAAAGCTACGAAGCGAAGGAGTACCATTTATCGGAAGCGCACGGCGTTAAGCCGATTGTGTACCAGTGTAACGCTTGCGACAAAACCTTCGCGATGCGTAAGCAGTTGAGGACGCATATAAAGAGAGACCACTTGATGGACAAGAGGCATAAGTGTGTCGAGTGCGACATGAAGTTTTTCACGATCTCCGAACTGAGGGGGCATTCGTCGAAGCACGCGGGCGTTCGGCACCCGTGTCCGGTTTGTCTGAAGACGTACTCGAGCGTCAGGACGTTGAACACTCACATGCGATTGCACATGGACGAAAGTAGTTTCAGATGCGATCATTGTTCTAAAAGGTTCTCGAAGAGGACCGGTGATAGAAATGGAGATTCCATCGAAAAAGCACCAAAAGATAATACGCCCGGTTCAGTAGATAGTAAACTTGAAGTAATTAAGCCAAAGGCTgtaaaattgaaagcaaatgtTGTCCAAACTGTTGTCAAAGTTAGAGGATCGATTATGAGAGAATTCAAGAAGCATCGAGATAATATTTTGGAGATAATGAAGAATTCGAACGCAACTCCGATTCGACATGATAACGGAGGAGCCGGTTACGCCTGTTGCTTCTGCGAGCAACAGTGTCCGGAGCCGGCAGACTTAAAAACCCACACGTTGCAGACACACAATGAGCACACAACCGCGAGCTTCCTGAAAAAACAAAGCATGCATGGATACTGCGTAAAATTGGATATCACCTCGTTGAATTGCAAACTGTGCGATGCTAAATTTGACTCCCTCGATATATTCATGGAGCATTTGAAGCGAGAACACGACAGGAATATAGATAGCGCTATCAAGAACTATATCATACCGTTTAAATTCGACGGCAACGGGCTCCGATGCTCGCTCTGTTCGGTACTCTTCGGCAGGTTTAAACAGCTCCAAAAACATATGAACGTGCATTATAGGAACTTTGTGTGCGGCGTTTGTGACGTTGGCTTCGTGAATCGCGGCGGCCTGTCGCGGCATTCGCGTAGTCACAAAACTGGCGTGTTCAGGTGCGCATTCTGCCTTAAGGTCTTCGATACGGACACAAAGAGAGCCGTCCACGAGAGAACGGTGCACGATAGGGTAAAATTTTACAGATGTGGATTCTGTAATGAAAAATTTGACAGTAGCCATCGAAGAcagaaacatttatttgaatCGCATGGCGTGAATCTACCTTTATTCGTTTGTCAGGCGTGCGATAAGCGATTTACCACCCACACGGCTATGAGCAGACACGTAAGGAAGTACCACTTGCTAGAAAGACGGCACGAGTGTGGAGAATGCGACATGACGTTTTTCACTGCGTCAGATCTCGCGAATCACTCTGTAAAACATACGAAAGTTCGTAGCTTCAAGTGCGAAGTTTGCTCCAAGACGTTCGCGTTGAGGAAAACTCTTAAAGTACATATGCAGATACATAATAATGATCGCAGGTTTAAGTGCGATTACTGCGGTCAAACGTTCGTTCAAAAGTTTAGTTGGAAGGTACACGTGCGGACGAAGCATACGCTGCAGCACGTGTAA
- Protein Sequence
- MGFVFFVGDEESEFDDTVIIVVSSKDDNKNDRNNVGDSVISDKAKMRDQMQKHKVNLRHILKYSNATPILRHIGIGYLCSFCAAHFLDPSDLKKHTLDLHGHNFNPLTCHNKSRRIDYYIKLDITSLQCSLCSEEIETLEELIDHLIKYHDVHFYTDIKNQILPFKFNGEQLNCFICGREFKKFKVLQEHMHVHYRNFVCEICDAGYVNAGGLYRHAECHDNGSYKCKHCPKVFNTPRKKKSHERVVHMQTVLYRCGYCFKIFKSYEAKEYHLSEAHGVKPIVYQCNACDKTFAMRKQLRTHIKRDHLMDKRHKCVECDMKFFTISELRGHSSKHAGVRHPCPVCLKTYSSVRTLNTHMRLHMDESSFRCDHCSKRFSKRTGDRNGDSIEKAPKDNTPGSVDSKLEVIKPKAVKLKANVVQTVVKVRGSIMREFKKHRDNILEIMKNSNATPIRHDNGGAGYACCFCEQQCPEPADLKTHTLQTHNEHTTASFLKKQSMHGYCVKLDITSLNCKLCDAKFDSLDIFMEHLKREHDRNIDSAIKNYIIPFKFDGNGLRCSLCSVLFGRFKQLQKHMNVHYRNFVCGVCDVGFVNRGGLSRHSRSHKTGVFRCAFCLKVFDTDTKRAVHERTVHDRVKFYRCGFCNEKFDSSHRRQKHLFESHGVNLPLFVCQACDKRFTTHTAMSRHVRKYHLLERRHECGECDMTFFTASDLANHSVKHTKVRSFKCEVCSKTFALRKTLKVHMQIHNNDRRFKCDYCGQTFVQKFSWKVHVRTKHTLQHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00112686;
- 90% Identity
- iTF_00112686;
- 80% Identity
- -