Aass018644.2
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- -
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000110.1:2912827-2921985[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0055 0.44 11.8 1.1 3 23 423 444 422 444 0.96 2 22 0.34 27 6.2 0.3 1 22 833 854 833 854 0.95 3 22 6.7 5.3e+02 2.1 0.3 1 22 895 916 895 918 0.82 4 22 0.0017 0.14 13.4 1.7 3 21 929 947 929 948 0.96 5 22 2 1.6e+02 3.8 0.1 2 20 956 974 955 978 0.88 6 22 0.0098 0.78 11.0 0.2 3 23 999 1020 997 1020 0.96 7 22 0.0052 0.41 11.9 2.7 1 23 1026 1049 1026 1049 0.96 8 22 0.12 9.9 7.5 0.0 1 23 1075 1098 1075 1098 0.90 9 22 0.0055 0.43 11.8 3.5 1 23 1103 1125 1103 1125 0.97 10 22 0.019 1.5 10.1 0.3 1 23 1131 1154 1131 1154 0.95 11 22 0.001 0.082 14.1 1.3 1 23 1167 1189 1167 1189 0.98 12 22 0.00018 0.014 16.5 1.8 1 23 1238 1261 1238 1261 0.97 13 22 0.019 1.5 10.1 2.0 1 23 1320 1343 1320 1343 0.97 14 22 0.001 0.08 14.1 2.1 2 23 1368 1390 1367 1390 0.95 15 22 0.039 3.1 9.1 0.1 2 23 1396 1418 1395 1418 0.94 16 22 0.0098 0.78 11.0 0.2 1 21 1462 1482 1462 1483 0.95 17 22 0.0012 0.097 13.9 0.6 1 23 1493 1515 1493 1515 0.93 18 22 0.00011 0.0088 17.1 0.3 2 23 1603 1625 1603 1625 0.93 19 22 3.3e-07 2.6e-05 25.1 1.4 3 23 1632 1652 1631 1652 0.98 20 22 0.018 1.4 10.2 1.1 1 23 1671 1693 1671 1694 0.93 21 22 0.027 2.2 9.6 0.6 1 23 1725 1748 1725 1748 0.95 22 22 0.00031 0.025 15.7 0.7 1 23 1756 1779 1756 1779 0.96
Sequence Information
- Coding Sequence
- atGAATGTGAACTATGAACGTGTTTGTAGACTTTGCTTGTCATCTCGAAGTGAATTACTGCCGATTTTtcctaccaccagttcggatgACACGGAACCTCCCGTCCTCGCTTCAAAAATTAAGGATTGCGTGTCAATACAGATAACTGAAAATGACGACTTGCCGACAAATGTCTGCAGAAAATGTATGGACAATGTCAACAACTGGCATATATTCAAGAGTGTTTGTGAAAGGACACAAAACAAACTACAGTCTCTGATTAATAAAGATGGCAGCCAACTAGAAGAGGTGAAAATTAAAAGTGAGCCATTATCTGATGAGGCCTATGATGATGGAGTGGTTATTGATGGCTCATACGCTGATAGTGAGAATGCCAGTTCAAGCAAAGTTCAACCAGAAGGGCCTCCAATCTTGGCTTCACTGGGGCTCACACCAAGAAGTGATAAGACTTATATAGACCCCAGAATGGATTGGCAACGGGTCCATGCAATATTAAACATAGTGCAGGATGATGATATCATTGATTCCCTGCAGTCTACTGAAGAGTGTGACATTCTACAACACTCTGATCATGATTCAGAATCGGATTCGGATCTTCAACCGGATACGAATGATATGTTTATTGATAGCAGAAATGGATacctttgtaaaaataataaacttctaTCAAAGTTTCCAAAAATGTCATCATCtctaatttatagtaaaatgagaGAAGCTACCAAACTGAGGAAATGTAAGATTGATGTATCTAAACATTGTTCAGGACCCAAGAAGGCTTGGCAACTGTTGTTTACTGATGACTTGTTGGAGCAAATTGTATCTTCTACTAATTGTAATTTGGCTGGTCAAGGAAAAGCAGTAACAGATCCTACAACAATTGgtgaaataaaaacacttaTCGGCATATTATATTTGCATGGAATAATGAGGCCAACTCATCAGAAATGCAGTGACCTATGGGACAATGAACTAGGAGCTACGTGTGTCAGAAACAATATGAAATACGAGCGTTTTAAATTTCTCTTGCAGAATATGCGCTTCGACAAAGATGACGATAGTATTATACAGTTGGATATAATGAAACGCATGCGTAAAGGCCTCGAGAGCGACAAAGATGAAGAAGAGGATGAGGAGGATATAAATGATAACTCCCACGCATTTACCAAAGTACCTAACATGCCGGAAGTTTCTATTACGGTCATGTGTCCCACAGGAGAAACCCTACATGCACGCCAAGGCATCCAACAACTCGCTTCCAAAGATTGCCTCGTTTGTGGGCGAACGTATAGATATTCACATAACGCTCGACGACACGAGTTAACAGCTCACAGTTTTGATAGATATACGAATAAAATAACATCAAAAAAGTCGCACATGCACATGCAGCCGAAATTAAGACCTAATCCTTTTAATCCTAAAGCACGTCTGATGCCCAATCCAATTAATCATAAAATGCAATTCATGCCCAAAAATGTCCcaactaaaattatttcacaaaaaattataaccccACCAAAACCTATACCAATCAAAACTGTTAAAACCCAACAGAATAATTTACCTTATCCATTACGAATTAAAGCACTTaaggatttacaaataaaaaagaaagagcCACAAATTTTGAAGACATTATTAACTTCAAAGCCGGAAGTCTTAGTTTCTGAGCCGGAGATATTAAATTCTGGACCGGAAAGTCCAGAGACGTTAATATCTGAACCAGAGATAGCATCATTTCAAGTGGAAGCTATTTTGTCTGAACCTGATCCAGACGCATATGACCACCATCAAGGCGACGATGAACATGATGGTGAAATGGAAATTAATCAAAGTCAACAATATGACACTGTCGACATGGACTCTGATAATGAAATAGAAATAGCTCGACAACAAGAAAATGCATCGGAAGGTGAAGATCAAAATGAAAGAGAAGACGATGTTCACCATGATGATAATATGGAGGAAACTCATAGTGATAATGACAAAGAGCCCAATGACGAAAATGGAGACAGTCAAGACAATATCGTTGTTGATGAGGGTTCAGAAATCAAAGTAGAAGATGATGCCAAAGACGAAGAACACGGTAATGAGGAGAAGGAACATGAAAACGAAGAACACGAGGGGAATCATGATGACAATGACGATGATGACGAAGAGCTTCCACCGATGGAGTTGGCGCCAGTAGTTGAAATAAACGAAGACATGCAAACAAATTCGTATATTAGCGAACTAAATGAAGAAGAACAGGAGGAACAGGAGGAAGAACTTGACGAAACAGCAGATCCTAATGAAGTTGTAGATGAAGAGTCTCCGGAGAAGGATGGTGATTctgataaattatatgtaacgaAAACACAAAGAGATTTCATCGCAAAATATCGTGATATAATAgaacaaataaacacaaaacGATGTTTATGTTGTGACAGAGAACATCCTCGGAGAAAGGCCGTGATTCagcatttacaaaaaaatgggCATAAAGTACCCAAACATACCTGTTATAATTGCGTTGTTACATTTGGACACATTGGAGCTCTGCTTAGTCATATGAGATCAAATTCTTGTACTGACCTTTGGAAAATAATCTACAATGAGAACGGTATAACGGAAGACTTAGTACTTCGACATGAAGTTAAAAACAAGGTtcattacaaagatattttcaaTGCTAGGTCTTACGCTTGTAAGTTATGTCCAGCAAAGTTTCAATTGAAACAGTTTATAATGAAGCATGTGTTAGATGTACATGAGGACGGACAGTCGAGAGTGCCATTGGGATGTGTGCATTGTCGCGCTAGATTCAAAGATAAGAGTTTACTAAAGAGACATATTCGAAATGGGGAATGTACGGTTTATATTTCGTGTGATTTATGTGCAGAAAAGTTTACGAACATTCAAGATTTTAATGATCATGCTGTAGCCGTACATGCCGGCAATTTCGACCAATCGGATAATGCTAACAAATGTGTCGACGGACGCCCAACGGACTGTCCCCTATGCGGGAAAAAGAACAGTAACTATCCAAATCTGGTTAAACATCTGAAAATGGTTCATAATGAGGAAAAACCTCACTACTGTCAACACTGTGATTCTAAATATGAACAAGCCGCTGATCTAAACAAGCACATTTATACGGAACACTCTGATAGGACTCTTGGCATGCAAAGAAGCGAACCCGATATGTCGCTCGTCAAGGAAGAAGCGGAGGAATATCATTACTCATGTACTGAATGCAACGCCATATTCGAGACTGTTGATGCTTGGACCGATCATCAAGTGGCTGAACATAACCAAGTGGCCCATCATTGTGATCAATGTGACAAAAAATTCTTGAGACCGTCAGAGCTCGCTGAACATAAAAATACCCATTTGCGAGTGAAATTTTATCCATGCAGTGTTTGTTCTAACTCATACAGCACTCCACAAAAGCTCTCCGAGCATGTTCAACAGTCTCATCCTGGCGCAGGCATGCAAACCGCTGCTGAATCAGAATTTTATTGTGACATATGTATTAGATCCTTCAAAAGTCGTCAGGCTTATTCAAATCATATGCGTATTCACGCTAAGGTGCCGACGACGAATAGAAAGCCTGGAGATCCTAAAGGCTTTGCTCCGCAAATAATAGGAAAACCAATTAAGCAATTTTCTATGGTGCAACCTGGTTTCGTTTCTTTTAAACCAAGTTATAATGTTCCTAATGCTCCATATTCTTGCGATATTTGCGGTAAAGGGTTTATgcataaaaagaatatttggaAGCACAAGAAAGTTTTACATGCTGATCTCATCGGAGACCGAAATGATAGTGAAGATAATACTATGCATGCTTCTACTGAAGAGGAGGAATTTAACATTGATGAAAATGGGGGATTGTCAACGCCTCAATTTAacagttttaattttactagTTTCACTAATAGCACACCACAACCGCAAACAGAAACAATGCCATACTCTTGTGAACTGTGCTACCAAAGGTTTCCATTACGAACTAGTCTTTGGAAACACAAACGTAACAAGCACGGCATCGTAACCCCAAattcaggttcagatttccaaATGCAGGGTGGCTTTGGTGACAATAGTAGTAGATCGAGTTGTACGAtctgtaaaatttcatttaccGACAAAAAATCCTATTACCGACACAGAAAGAACGTGCACAAATCTTCAGTACAAATGTGTAAGATATGTGGTAAACCGCTTAGTTCAACGCTCGAGCTATATGAGCACTTAAAGGCGGCTCATGCACGTGAGCTGCTAGGGTATAATGCTAATCAAGGCTCGAGTAAATCGCAAGATGCCCAGCAAGATATGGAAACCGAGTACGAGAACGAACAAGAAGCTGTCGATCCTAACGTCGAGTATCAAGCTAGATACCCGTGCGATACGTGCGGGAAACAGTTCGTCGGATTGTTGGCATTACAGAATCATCAATGTATAAACCAACAGCCGTCACAGCCGCAAACCTTTGACTGTGAGATTTGTCACAAGAGTTACACGTCGATAGCAGCTTTGAAGAGTCACCGTGGTTGGCATCTGCGCTCGCCGGACGGCAAAGCTGCTGCTAATAATTCTGGACTTTGGATGCCCCAGCACAAAGTTACAAGTAAAGTAAGCAAACATGAGGTCACCGAGACTGCGCCAAGCCTACGTAGTCAACATAGCACTTCTGCTTCCATAGCCAAAAGGAGATTACCACCTGAAGTCGAAGTGACAGTTGTGAATCCAAACAAGAAATTGCGTTCCGATGATTCCGTCGAGCTGGATCAGCAGAACGCTGGGTCATTGGAAGACAGATATTGTACTATTTGCGACAAAGAGTTCACCAAACGTGCCGCTTACCAACGACACATGGACGAAGTGCACCAGCCTAATTCTGTTTTCTGCCCCGTATGCGACAAGAGTTTCACCCGCAAATCGACACTGCTCGTTCACATGAAGAAACATTACGACAGCGGGGAGGGTAGTTCGAACGCGATGTCACAGATGGAGGACGAGATACACGCCTGCGATCTATGCGGAGCTCAATACGACAATGCTAAAGCGTTGAGATCTCATAGGGCGAGACACCACGGTGAGGAATCCGGGGAATCTGAAGACGATGGGAACGTACCGATTACAACCGCCTGGAGAGTTCACGTTATGCACGCGACACCTACAAAATTCTTCTGCAACATTTGCAAAGTCTACTTTGCGAGAGCTCTGGATCTCTCATCGCACACGCGAGCGAGACACGCCGATAACGAGAAAGTGTTTTTCCCATGTGCCATGTGCGACCGATTCTACATGAATAAAAAGAGTCTCCAAAGACACATAGAGATGTCTCATTGA
- Protein Sequence
- MNVNYERVCRLCLSSRSELLPIFPTTSSDDTEPPVLASKIKDCVSIQITENDDLPTNVCRKCMDNVNNWHIFKSVCERTQNKLQSLINKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYADSENASSSKVQPEGPPILASLGLTPRSDKTYIDPRMDWQRVHAILNIVQDDDIIDSLQSTEECDILQHSDHDSESDSDLQPDTNDMFIDSRNGYLCKNNKLLSKFPKMSSSLIYSKMREATKLRKCKIDVSKHCSGPKKAWQLLFTDDLLEQIVSSTNCNLAGQGKAVTDPTTIGEIKTLIGILYLHGIMRPTHQKCSDLWDNELGATCVRNNMKYERFKFLLQNMRFDKDDDSIIQLDIMKRMRKGLESDKDEEEDEEDINDNSHAFTKVPNMPEVSITVMCPTGETLHARQGIQQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITSKKSHMHMQPKLRPNPFNPKARLMPNPINHKMQFMPKNVPTKIISQKIITPPKPIPIKTVKTQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPDPDAYDHHQGDDEHDGEMEINQSQQYDTVDMDSDNEIEIARQQENASEGEDQNEREDDVHHDDNMEETHSDNDKEPNDENGDSQDNIVVDEGSEIKVEDDAKDEEHGNEEKEHENEEHEGNHDDNDDDDEELPPMELAPVVEINEDMQTNSYISELNEEEQEEQEEELDETADPNEVVDEESPEKDGDSDKLYVTKTQRDFIAKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITEDLVLRHEVKNKVHYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLGCVHCRARFKDKSLLKRHIRNGECTVYISCDLCAEKFTNIQDFNDHAVAVHAGNFDQSDNANKCVDGRPTDCPLCGKKNSNYPNLVKHLKMVHNEEKPHYCQHCDSKYEQAADLNKHIYTEHSDRTLGMQRSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQSHPGAGMQTAAESEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIIGKPIKQFSMVQPGFVSFKPSYNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLIGDRNDSEDNTMHASTEEEEFNIDENGGLSTPQFNSFNFTSFTNSTPQPQTETMPYSCELCYQRFPLRTSLWKHKRNKHGIVTPNSGSDFQMQGGFGDNSSRSSCTICKISFTDKKSYYRHRKNVHKSSVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDAQQDMETEYENEQEAVDPNVEYQARYPCDTCGKQFVGLLALQNHQCINQQPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVTETAPSLRSQHSTSASIAKRRLPPEVEVTVVNPNKKLRSDDSVELDQQNAGSLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYDSGEGSSNAMSQMEDEIHACDLCGAQYDNAKALRSHRARHHGEESGESEDDGNVPITTAWRVHVMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01316582;
- 90% Identity
- -
- 80% Identity
- -