Basic Information

Gene Symbol
-
Assembly
GCA_035772565.1
Location
JAQQSE010000035.1:8294126-8296516[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 4.5 5.6e+03 -1.7 0.0 22 33 226 237 225 242 0.79
2 5 2.3e-10 2.8e-07 31.2 0.2 1 45 257 303 257 304 0.94
3 5 5.6e-08 7e-05 23.6 0.1 2 44 311 357 310 359 0.93
4 5 1.1e-10 1.4e-07 32.2 0.0 1 42 363 404 363 407 0.97
5 5 2.3e-06 0.0028 18.4 0.0 3 44 415 458 413 459 0.92

Sequence Information

Coding Sequence
atggaCATCGATACCAATAGCGATGAAGATTCCGAGGTAGAACTGCAAGATATAAGGCAATTGAATGCAGTTTTAGATGCAGACGAGCCGTGTACAAGTGATAGCATTTCACAACATACTATCACATCAGGGATTATATCTACATGCACCAGTAAATCATCAGACCAATTATCAAAGATAGATGAAGCGCtttcattgaatataataacAGATGATAAGTTGCGGCGTTTAGAAATAATTCTTACCAATCGCTTGCTTGAATGTCAACGGAGACTTCAAGATATTTCATGTACGGGCATCATTCCGGAACGAACAGAATCATTTCGTTATTTCATATGTGGCAAACCTTATTTTAAAGACAGATCAAATTTTCCTCCTCCTGATAATGAAGACACTATAGTCATGAGAAGTTCTCAGATGTATGACTTCTCCCAAGTTGTATCTGTATCTGGATGGACTGTTAAGGATAAAAGTcaatttattacagaaatacATAAAATGTCACAAGATTTAAAGAAGAAGGAGTTACAATCAAAAATTGCAGAATTACGCAGAAAGAAAAAGGTTAATGATAGCAAAGAAATAAATGATGAAATTGTATCAATTAGCAAAGAGATCTGTTTGATTAAAGATAAGCCATTATCAGAAGTAGTACTGCCAATAGATATAGATTATGACTGGGAATTATTggctaataaattaaatagaagaCACACCGCCCAAGAATATGAATCACTATGGAAATTATATTTCCacccaaaaataaataaaaacagttggTCTAAATCTGAGCATTTAGCATTACAAAAGATTGCTAATGAAAATAATTCACAAGACTGGAACAATATCGCCAAAAAACTTAATACTGGTAGAACTGGCTATCAATGCTTTGTTTACTTTAGAACTAACATGACCAATGTGTGTATTGGTAAGAAGTGGAGTAAAGaggaaattgaatatttaagtaGACTTGTTGATTATTACAAAGAAGACCACTACATACCATGGGGTAAAGTTGCTGCGGCAATGGATAATAGAactaaaattcaaatttataacaaGTATTTAAGACTCGTTGAAAATAGAAAAGGTAGATTCTTACCAGAAGAGGATGCCGTGATATTAAATTGTGTTAATAAAtttggaattaattttaaaaaaatgttgaatttcATGCCAGGTAGATCAACAATACAGATTCGAAATCGATACTCTGTGTTGACAAAGATGAGAGTCTCAACGGTATGGTCAATTAAAGAAGATAAAAAGCTTGTTCAACTCATGGCTAATCAGGATAGTAATGTGAATTTTGCTAGTTTGTGTGAATTTTTTCCTGGAAAAGACAGAGTGAATATACGTAGTAGATACTTAACATTGTCAAAATGGATAAAGAGTAATCCCAATTCAGATATTAAAAATGCACCACGTAGAGCTGCACGCCGCCTTTTACATGGACAGCCCACAGATAATTTACATCAAGCTGTTGAGAATTTGAAAAATAGAATGCAGTCCGAAGTTAACTCAAAAATAAATAGGAAAATAACCAAATTTTCTACAGAAAGTGATATTGACGATGCTATTATTACAACAATTCTCAGTGAAGATGCCAGAGAAGAGGAAACTGAAGATACAGATAATGTAGAAAATGATATGTACAACAACTCCATCAACACTTATATAGATCCTAATGttacaaatttgaaaaaacTTCTTCTTTTACTCAATGCTAGCTTACAGAAAGAGGCTTTTAAAAAGAGCTTTTACAATATCCAATATCCGAGTTTGCTTCACACAAAAGAAGTGTCTTTAGTTAAATTGAAGTCTTATTCTAGGAAGAATAGTGTTCAGAATTATCATATTGGAAAATCACCTGATATTTGGGGTAACAATGCTCTCGGAACAGTTGAACATGTTTTACCTCCACACTATGCAACTATTACAGGTTGTCGAGTTTTATCAAGCCTTACAAGTATAAAGGGGTTGCCAGGTCAGGAAAATGTCAATGTCACTGTATTATTAAAACGTaatgtgttattaaaaaatcattttaatttattgttagaaagatttaatatattattcctGTGGCCAATGTTATTATCAAATGAAGGGCCATGTCCAGAAGCAAGGACTCCAACATACAGTGATCAGAAAAACATACATTATAACAATAAAGAGCCTGTAATAATTCCAAGCATACATATCCCTAGGCATCATATGGGGTCAAAAAGAAAATCGGATGACAAGGGAAAAGAAGCAAAGCGACAAAAATCTGAAAGCAATTTAGACCAAATCGACTTGGATGATGAAGATGAAAAGCAAGAAGTAACAATTAAAGAAGATTTTACCGATGATTTGGGATTGTATGAATACTCAATGGATGCTACATAA
Protein Sequence
MDIDTNSDEDSEVELQDIRQLNAVLDADEPCTSDSISQHTITSGIISTCTSKSSDQLSKIDEALSLNIITDDKLRRLEIILTNRLLECQRRLQDISCTGIIPERTESFRYFICGKPYFKDRSNFPPPDNEDTIVMRSSQMYDFSQVVSVSGWTVKDKSQFITEIHKMSQDLKKKELQSKIAELRRKKKVNDSKEINDEIVSISKEICLIKDKPLSEVVLPIDIDYDWELLANKLNRRHTAQEYESLWKLYFHPKINKNSWSKSEHLALQKIANENNSQDWNNIAKKLNTGRTGYQCFVYFRTNMTNVCIGKKWSKEEIEYLSRLVDYYKEDHYIPWGKVAAAMDNRTKIQIYNKYLRLVENRKGRFLPEEDAVILNCVNKFGINFKKMLNFMPGRSTIQIRNRYSVLTKMRVSTVWSIKEDKKLVQLMANQDSNVNFASLCEFFPGKDRVNIRSRYLTLSKWIKSNPNSDIKNAPRRAARRLLHGQPTDNLHQAVENLKNRMQSEVNSKINRKITKFSTESDIDDAIITTILSEDAREEETEDTDNVENDMYNNSINTYIDPNVTNLKKLLLLLNASLQKEAFKKSFYNIQYPSLLHTKEVSLVKLKSYSRKNSVQNYHIGKSPDIWGNNALGTVEHVLPPHYATITGCRVLSSLTSIKGLPGQENVNVTVLLKRNVLLKNHFNLLLERFNILFLWPMLLSNEGPCPEARTPTYSDQKNIHYNNKEPVIIPSIHIPRHHMGSKRKSDDKGKEAKRQKSESNLDQIDLDDEDEKQEVTIKEDFTDDLGLYEYSMDAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-