Aass006124.1
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- -
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000030.1:1364215-1377057[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-11 4.9e-08 33.3 0.0 4 39 148 184 145 188 0.90 2 4 2.3e-12 6.2e-09 36.1 0.2 1 39 199 237 199 241 0.94 3 4 7.6e-15 2e-11 44.1 0.1 2 45 255 299 254 299 0.96 4 4 9.4e-16 2.5e-12 47.0 0.0 4 42 309 348 307 350 0.94
Sequence Information
- Coding Sequence
- ATGAGTGAGCGTGGTCTGGTGCTAGTGAAATGCGAGCCGCCTCTAGAAGAGGAGGACACTGATTTCCATTATGCACACAATTGCCTGTCGAATGAGGTTTCTAGCACATTGGAAGAGCTAGCACCGTTAGCGCCGGCTGGTCCTGCTGCTACTCCGGTCTGTATTAAGCAAGAACCCGCCGATACCCCGCCTACAGTCACCTTGGAAACCCTGGAGTCTGCTTCACATAACTCAGCGgCCTCTACTTTTATGAGTAGACATGTGGAGCTGCTGTTGAATGATATTCCAAACGCAGCTAGCTTCACTTCGATGATGGCAGTTAAAGAGGAACCATTATCTGAAGGAGaGCAACATCATTTAAGTGATGAAGATACAAGCGATTCGTGTAGCACCCAATCTGATATTGTGACGCGCGGCAGCCCAAAGAGTTGGACCCAGCGAGACATGGATAACGCACTCGATGCCCTTCGAAACCATAATATGAGTCTTACAAAGGCTTCTGCAACTTACGGCATACCGTCTACTACTCTGTGGCAGCGAGCGCACAGACTCGGCATCGACACTCCAAAGAAAGAGGGAGCTGCGAAGTCTTGGAGTGAAGAAGATTTGAAAGGAGCTCTTCAGGCATTGAGAGCCGGCGCTATATCAGCTAATAAAGCCAGCAAAGCATACGGCATACCGAGCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGACTGTCGGCGCCGTTCAACGCGGCCCCCACGGCGTGGCGACGCGCCGACCTGCGTCTCGCGCTCGCCTCCATCCGCTGCGGCGCCGCCTCCGTGCAGCGCGCTTCCTCGCACTACGGCATCCCCACCGGCACGCTGTACGGGCGCTGCAAACGCGAGGGCATCGAGCTGTCGCGCGCGAACCCAACGCCGTGGCCGGAGAGCGCGATGGTGGACGCGCTCGAGGCCGTCAGaattGGTCAGATGTCGATAAACCAAGCCGCCATACATTTCAATCTGCCGTATTCATCACTGTATGGAAGATTCAAAAGGTGCAAGTATCAAAACCAGGTAATCCAAACAACTCAACAAGACCAATCGAAATCTCATGAATCGGAACGACACATCCAAGAGATACCACACCACCAGCACTCCCAACCTCACGTCCTACATCCGTCGTTTCAAGAGAATCAAACGCATACGCCTTACAATATCTCTCAACATTACATACACGAAGATACTTCAAGTGTACACGATTACGCCCAAGGAGTATTCTTCAGTCAAAACTTCAGTAGTATTGTTACTAGTTGA
- Protein Sequence
- MSERGLVLVKCEPPLEEEDTDFHYAHNCLSNEVSSTLEELAPLAPAGPAATPVCIKQEPADTPPTVTLETLESASHNSAASTFMSRHVELLLNDIPNAASFTSMMAVKEEPLSEGEQHHLSDEDTSDSCSTQSDIVTRGSPKSWTQRDMDNALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEEDLKGALQALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLRLALASIRCGAASVQRASSHYGIPTGTLYGRCKREGIELSRANPTPWPESAMVDALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQNQVIQTTQQDQSKSHESERHIQEIPHHQHSQPHVLHPSFQENQTHTPYNISQHYIHEDTSSVHDYAQGVFFSQNFSSIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00113242;
- 90% Identity
- -
- 80% Identity
- -