Amun039268.1
Basic Information
- Insect
- Anorthoa munda
- Gene Symbol
- -
- Assembly
- GCA_945859655.1
- Location
- CAMAOM010001327.1:359802-389297[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0018 0.21 13.2 0.7 1 23 314 336 314 336 0.98 2 11 0.039 4.7 9.0 0.3 2 23 344 366 343 366 0.96 3 11 0.38 45 5.9 0.2 1 23 370 392 370 392 0.94 4 11 0.00031 0.037 15.6 1.1 1 23 397 420 397 420 0.97 5 11 0.0036 0.42 12.3 0.6 2 23 425 447 424 447 0.94 6 11 8.6 1e+03 1.6 0.1 3 21 461 479 460 480 0.92 7 11 0.26 31 6.4 0.2 2 23 539 561 538 561 0.94 8 11 9.6e-05 0.011 17.2 1.3 1 20 576 595 576 598 0.94 9 11 1.9e-06 0.00022 22.6 2.0 1 23 604 626 604 626 0.98 10 11 2.2e-06 0.00026 22.4 2.8 1 23 633 655 633 655 0.96 11 11 0.00011 0.013 17.0 1.2 1 23 661 684 661 684 0.92
Sequence Information
- Coding Sequence
- ATGGGCATTTGCTGGGAGTGCACTGCAAGGTTGCAGTCAGCCGCTTCATTCAGATCGAAAGCGCTTTTCAGCGATGCATTGCTGCAAGATCATTTGGAGAATAATGCTGATCTCACAATCACCGACATAAAAAACCTACATCGCCAGCACACCAACTTAAAACCAACTATGGCGGTGCAAGAAGTTTTTAAATTCAACAGCCACAATGCCGACGAACACGCACCTAACACTTTAATCAAATCCGAAGTAATTGGTATACCGCATAACGAAGAAATAGAAATCGAAGTAGGGAATTTAGTAAGCGAGAAAATCACTATCAAGGACGAGGGTAAAAATGAAATAATCGAAGAGGTTAACCCTAATGGTGATGTGAAAACCGAAATCGATTTGATACCGATAACCGAAATGGATGTCGATAGGGAAGATTTTGAAGAATTCAGCGGAGATGATTGTCGTATAGTCAAAGAAAATGTTTATGTGAATGAAATGAAAGTTAGTTTGGATAATATTGTTTTGTTTAAAAGTGAGGGTAGTACAGATAATGATAAAATTAATCTGAAATTGGGACAGAAGGGAAAAGATATGTATAGTGATGATGATGATGAACGAATAGATTTTACTGATGTCGATGATGACGCAAATGACGCGAATAAAGCAGTATTGTGCAAAGAGAAGAATAAAACTGAAGTTAAAAAGAAAAACGCTGTAAAAAGAAAGGCGAAGACTGATGGTGATGGTGTTGTATGCGTTAAAGGGAAGAGACCGAAATCTTCAGATAAAAAGAATCAAACAAAACCAATCAAGAAGAAGAAACAGCCTTACGTGAAGCCCAGTACACCTATTGACGAGAACATCTTCACCGTGAAGCCGTTGAACCACGAAGACTTGAGGAGAGAGATACTCGCTAAGAGAGATAGTTACCAGTATATAGAAGCGCCGTTCAAATGTAACGTGTGCTTCAAAGGGTTTCCCACGGAGGACAAGCAGGCCAGACATGTGCTCAAACATACTGAGAAATACGGATCAATAAAGTGTAACATATGCGATGTTCGAATGGCTAAACTTCGAGATCTGCGCGCCCATGTGAAGAGACAACACACTTCTGAGTTTATATGTAAACTGTGTCCTATGGTCACGAGGAATAAAAACGTTGCACTAGGACACATGAAGTATCATGAGGGTAACAAGTACAAGTGTCCGCAGTGTTCTGTTGAGTTTGAGAAAAAAACCACATTATTGAATCATCTGCGTTTAAAACACATGTCTGCCTGTGTCTGTGAGTTGTGTGGCTACACGTTTGTAAGTAAAATTGGAGTCGAGGTACACAAGAGATTGAGGCATAAGCTGTTTGATAAAAATACGGAATTCAAGGGACAGTTCTGCGAGGTTTGCGAAGTGAAGTTCTTGACTGAGAAGGCTTACGACAGGCATCTGCGGTTATCTTCCAAACATATTAAAGAACACGACCCCAATCGCATGAGCAACGACCCGTCCCTCAAACAGCGTCGCCTCGGCGCTTCGTATATCCGTCGTTTATATACAGACCCGCGCTCACGCCGCCCGGTCATACACCGCAGAGACCCGAACACCGAGCCAGCCACTAACGGACCCCTCACTTGTGAACAGTGTGGCGTGGTACTAGAAAACCTCCGCGCCTACGCGGCACACTTCAGACACTCGCACCCCGGCATCAACCGCACGCAGTACGACAACATCAAGACGCCGTACATGTGCGAGCACTGCGGCAAGTTCTTCAACAGCACAACAACCCTGTCTGCCCACATGTGGGTGCACGATGGTCAGAAACAGTTCCAATGTGACCACTGCAACAAGTCGTTCACAATGAAGGCGAACCTCGCTGGTCACATGCAGCAACACCAGGCCGTAAGACGGATGTACGACTGCCGTGTGTGTGGGAAACGCTTCACGTTCAGCTATAATCTCACCCGGCATATGTTTCAACACACAGGCCTTCGCCCCTTCAAATGCGACGCGTGTGAGAAGACGTTCCGAACAAGCGGAGATCTGCGCTCTCACGTAGACCATGTACACTTGAAGAAACCTCGACCCAAGCGCGTCAGACGGAAGGTGAAGAAACCTGAGATGCCTAGCTTAGAGTACTAA
- Protein Sequence
- MGICWECTARLQSAASFRSKALFSDALLQDHLENNADLTITDIKNLHRQHTNLKPTMAVQEVFKFNSHNADEHAPNTLIKSEVIGIPHNEEIEIEVGNLVSEKITIKDEGKNEIIEEVNPNGDVKTEIDLIPITEMDVDREDFEEFSGDDCRIVKENVYVNEMKVSLDNIVLFKSEGSTDNDKINLKLGQKGKDMYSDDDDERIDFTDVDDDANDANKAVLCKEKNKTEVKKKNAVKRKAKTDGDGVVCVKGKRPKSSDKKNQTKPIKKKKQPYVKPSTPIDENIFTVKPLNHEDLRREILAKRDSYQYIEAPFKCNVCFKGFPTEDKQARHVLKHTEKYGSIKCNICDVRMAKLRDLRAHVKRQHTSEFICKLCPMVTRNKNVALGHMKYHEGNKYKCPQCSVEFEKKTTLLNHLRLKHMSACVCELCGYTFVSKIGVEVHKRLRHKLFDKNTEFKGQFCEVCEVKFLTEKAYDRHLRLSSKHIKEHDPNRMSNDPSLKQRRLGASYIRRLYTDPRSRRPVIHRRDPNTEPATNGPLTCEQCGVVLENLRAYAAHFRHSHPGINRTQYDNIKTPYMCEHCGKFFNSTTTLSAHMWVHDGQKQFQCDHCNKSFTMKANLAGHMQQHQAVRRMYDCRVCGKRFTFSYNLTRHMFQHTGLRPFKCDACEKTFRTSGDLRSHVDHVHLKKPRPKRVRRKVKKPEMPSLEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00111957;
- 90% Identity
- iTF_01117653;
- 80% Identity
- -