Basic Information

Insect: Anorthoa munda
Gene Symbol: ZIPIC
Assembly: GCA_945859655.1
Location: CAMAOM010000384.1:103462-104922[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0047 0.56 11.9 0.4 2 23 159 180 158 180 0.98

2 11 2.5e-05 0.003 19.0 1.7 1 23 186 208 186 209 0.95

3 11 0.00071 0.085 14.5 0.3 1 23 216 238 216 238 0.98

4 11 1.1e-05 0.0013 20.2 1.1 1 23 244 266 244 266 0.98

5 11 1.2e-05 0.0014 20.1 3.1 1 23 272 294 272 294 0.97

6 11 1.5e-05 0.0018 19.7 1.5 1 23 300 322 300 322 0.98

7 11 4.4e-07 5.2e-05 24.6 0.3 2 23 329 351 328 351 0.96

8 11 0.019 2.3 10.0 0.3 2 23 357 375 356 375 0.84

9 11 0.0014 0.17 13.5 0.7 1 20 381 400 381 404 0.90

10 11 0.013 1.6 10.5 0.4 1 23 410 435 410 435 0.94

11 11 3.4e-05 0.004 18.6 4.8 1 23 441 464 441 464 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0047	0.56	11.9	0.4	2	23	159	180	158	180	0.98
2	11	2.5e-05	0.003	19.0	1.7	1	23	186	208	186	209	0.95
3	11	0.00071	0.085	14.5	0.3	1	23	216	238	216	238	0.98
4	11	1.1e-05	0.0013	20.2	1.1	1	23	244	266	244	266	0.98
5	11	1.2e-05	0.0014	20.1	3.1	1	23	272	294	272	294	0.97
6	11	1.5e-05	0.0018	19.7	1.5	1	23	300	322	300	322	0.98
7	11	4.4e-07	5.2e-05	24.6	0.3	2	23	329	351	328	351	0.96
8	11	0.019	2.3	10.0	0.3	2	23	357	375	356	375	0.84
9	11	0.0014	0.17	13.5	0.7	1	20	381	400	381	404	0.90
10	11	0.013	1.6	10.5	0.4	1	23	410	435	410	435	0.94
11	11	3.4e-05	0.004	18.6	4.8	1	23	441	464	441	464	0.98

Sequence Information

Coding Sequence: ATGGAGTCGAAAGTATGCCGTATTTGTCTCAAGAAAACGGCCACAATGTCTATATTTGACGGAGAAGACGAAATTCAATTTAGCACTAAGGTGATGCGCTGTGTTAATGTGGTGGTGGTGGAAGGAGATGGGCTTCCTGACAACATATGCAATATCTGTGCGGTGGAACTGGCCTCATCCTACGAGTTCGTCAACAAATGCGAGGCTTCCGACAAGGCTCTACGCAGCGCTAATATTGCCAACCTGTATGATGAGTTACAGCCCAAAACTGAACCTCATATTAAGTTAGAAATTATCAAGGAGGAAAGTGGGCAAGATGACCAAGATCACTTCGATAATTTCTTATTAGATAACCCCTCCGACTGTAGTGATATCTATAATATTCAGGAAGTTAAAAAAAGGAAGTATGCAAGGTCTGGCAAATACAAACAAAAAATAGATGGGCGGAAGTTAAGGCCTAAAGTGGGACCAGTACAGTGCAAAGTATGTGGGTTAGTGGCAAAGTGCCGCTCCGCTCTGGAGGGGCACATGAGGACTCACACCGGGGAGAAACCCTTCGCGTGTGACTCCTGTGACGCACGGTTCAACCTGAAAGGGTCACTAAAGCGACACATCCGAACACACCACACTCAGAGAGAAAGGAAATTCATTTGTGAAACATGTGGCAGCAGCTTCTTCACAAAGAATGGTATCATAACACACATAAGAGTTCATACTGATGAGAGACCATATTCTTGCTCATTCTGTGGAAAAGCATTTCGGCAGCTTGCTACAATGATAAGACACAAACGATTGCATACAGGTGAAAAACCATTCTCATGTTCCATCTGCTTCAAGAAGTTCATAGACAAGAGCCACATGAAGAGACACCTGGCCGTGCACTCTGATGAGAAGAACTTCACTTGTCACTTATGCAGCAAATCTGTTAAAACTAGAAATGCTCTCAGGGCTCATATTCAGATACACTCTAATGAAAAGCACCTCATTTGTAGTTACTGTGGATTGTCATTCTCTTTTAAGGGCAACCTACAAGTTCATATACGAAGAATACACTCAGAGAGGTCTGGCCAATGTAGTGTGTGCTTGAAGACATTCCCAGATTTAGAGGCACACATGCGTAAACACACTGGAGAGAAACCATTTGCGTGCAAGCTTTGTAATCAGGCATTCGCAAGTAAAAGGAGTTTGTCAAACCATGTAGGATTCAAACATAAGAATGCTTCAAAGTTCAAGTGTTCTATAGGAGAATGTACTAAGACTTTCCCGACTGCTATGATGCTGGAGTTCCACCTTCTGAAGCAGCACACTAATCATACGCCGTACGTCTGTCACCATTGCTCCAGAGGTTTCTTCAGGACCAGTGATCTGTCCAGACACCTCAGAGTCAGTCATATGGAAACTGCTACAATGGTTGAAACTATAAAGTTGACACCCAAGATATTAGCATCTCCAATAATCTGA
Protein Sequence: MESKVCRICLKKTATMSIFDGEDEIQFSTKVMRCVNVVVVEGDGLPDNICNICAVELASSYEFVNKCEASDKALRSANIANLYDELQPKTEPHIKLEIIKEESGQDDQDHFDNFLLDNPSDCSDIYNIQEVKKRKYARSGKYKQKIDGRKLRPKVGPVQCKVCGLVAKCRSALEGHMRTHTGEKPFACDSCDARFNLKGSLKRHIRTHHTQRERKFICETCGSSFFTKNGIITHIRVHTDERPYSCSFCGKAFRQLATMIRHKRLHTGEKPFSCSICFKKFIDKSHMKRHLAVHSDEKNFTCHLCSKSVKTRNALRAHIQIHSNEKHLICSYCGLSFSFKGNLQVHIRRIHSERSGQCSVCLKTFPDLEAHMRKHTGEKPFACKLCNQAFASKRSLSNHVGFKHKNASKFKCSIGECTKTFPTAMMLEFHLLKQHTNHTPYVCHHCSRGFFRTSDLSRHLRVSHMETATMVETIKLTPKILASPII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00041110;
90% Identity: iTF_01119608;
80% Identity: -