Basic Information

Insect: Anorthoa munda
Gene Symbol: -
Assembly: GCA_945859655.1
Location: CAMAOM010000274.1:28217-30378[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0087 1 11.0 0.5 2 23 115 136 114 136 0.97

2 14 0.35 42 6.0 0.2 6 23 148 166 148 166 0.95

3 14 0.013 1.6 10.5 0.1 2 23 177 199 176 199 0.93

4 14 5.8e-08 6.9e-06 27.3 1.0 2 23 222 243 222 243 0.97

5 14 2.7e-05 0.0032 18.9 2.6 1 23 249 272 249 272 0.96

6 14 0.0033 0.4 12.4 0.0 1 23 278 300 278 300 0.97

7 14 6.4e-06 0.00076 20.9 3.0 1 23 306 328 306 328 0.98

8 14 0.049 5.8 8.7 1.7 1 23 447 469 447 469 0.97

9 14 0.00046 0.054 15.1 2.1 2 23 476 498 475 498 0.91

10 14 1.1e-05 0.0013 20.2 2.3 1 23 504 526 504 526 0.98

11 14 9e-07 0.00011 23.6 4.4 1 23 532 554 532 554 0.98

12 14 0.00016 0.019 16.5 0.3 1 23 560 582 560 582 0.98

13 14 3.9e-05 0.0046 18.4 1.2 1 23 588 610 588 610 0.94

14 14 0.00034 0.041 15.5 1.7 1 23 616 639 616 639 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0087	1	11.0	0.5	2	23	115	136	114	136	0.97
2	14	0.35	42	6.0	0.2	6	23	148	166	148	166	0.95
3	14	0.013	1.6	10.5	0.1	2	23	177	199	176	199	0.93
4	14	5.8e-08	6.9e-06	27.3	1.0	2	23	222	243	222	243	0.97
5	14	2.7e-05	0.0032	18.9	2.6	1	23	249	272	249	272	0.96
6	14	0.0033	0.4	12.4	0.0	1	23	278	300	278	300	0.97
7	14	6.4e-06	0.00076	20.9	3.0	1	23	306	328	306	328	0.98
8	14	0.049	5.8	8.7	1.7	1	23	447	469	447	469	0.97
9	14	0.00046	0.054	15.1	2.1	2	23	476	498	475	498	0.91
10	14	1.1e-05	0.0013	20.2	2.3	1	23	504	526	504	526	0.98
11	14	9e-07	0.00011	23.6	4.4	1	23	532	554	532	554	0.98
12	14	0.00016	0.019	16.5	0.3	1	23	560	582	560	582	0.98
13	14	3.9e-05	0.0046	18.4	1.2	1	23	588	610	588	610	0.94
14	14	0.00034	0.041	15.5	1.7	1	23	616	639	616	639	0.96

Sequence Information

Coding Sequence: ATGACCGTTAGCATTAAATCATCTCCAAGTATAGAAGAGGAAATAGATAAGTTGTTTTACACCAGTGTCAGAAACACTCTCGTTGGCTTTCATATTGATGTAGACGAGGAGTATACGGACGTGGAGATCGTTTGCCAAAAGTGTGACACCAAGCCAGCACTGACCACTGTGTGCAGCCTCGCTCACCATATCCGACATGACCACTCTCCTGAAATACTTAACAACAGCGTTAAAGCATTCATCACTGAATACGTAACATTTGAACAAGTGCTAGCAGAGGATTCTGACAGAGAAACATTATCAGATACAAAAGAGAAATCTCCGATAGTTCTGCCGTCCTTACGCTGTCCATTTTGTTCGAGTGTGTTCTCTTCAGCCACGCGGCTTGTCTACCATTTGAACAAGCATGTGGAAGTGAGCATGGCGGATGGCGTCATGTGCTGTGACGTCGTCTACAGCGACAAGAAACACTTCGTGCTACACTTGCAAGAGGCACACGTTGACAGAACAGCCGATGAGCAAGTACAAGAGTGTGTTATCTGTGGTTTCACGACTGAGACAGTCGACGAATTGAAACAGCATTATAAAGACGCGCATAACGATGCAAAAAGTACGAAAGAGAAGAAAACAGAGAGTCCAAACAACCAGAAGTACATCCCGGCGGTGTGCCCCGAGTGCAACAAGACGTTCTCCAACAAGTACAACATGTTCGCGCACATGCGCAGCCACACGCGCACCGCCGTCTACCCGTGCGACAAGTGCTCGCGCACGTACCGCAACCAGGGGAACCTCACCCATCACAAGAAGCTTGCGCACCAGGGGATACTTAAGTTCATATGTGTCGAGTGCGGGGAAGCCTTCCCCAGTCGATCAGAACGCGACATACACGCGCGTATACACTCAGGAGAGACCCCCTACAAGTGCCAGCACTGCGGCAAATCATACCGAGCCAAAAACACGCTCACACGACACCTAGAAATCCACGCAGACATACGCAAATACGAGAGCCCCTGCGACTTGCCCGAGGAGACACGCAGTGCTTCTGAACTCTCCGAGCTGTCAGATGACGAGCCGCTGGCCAAGTTCGCCACCAAAAAGCCTGCAAAACTCTATACCAACTTCTACAGAGCTCTTGTGAACTTCAGAGACCACTTTGTCAATGATCAACATCAGGAGGATTACCCTGATTTCACAGACTCCAGTGTATCTGATGCAGAGGAGAATGTCGTGGACAGGTTCGACGACCTGACGCAGAGTAACATGCGGCGAGACCGGCTGGACGAGGACACGCGGCGGGAGCTGAGCGCGGCGCGGCACCAGGAGCACAACAAGACGTACTACACGTGTGCGCTGTGCGGCAAGCGGCTCAGCTCGGCGCACACCTACGTGTTCCACCGGCGCATCCACACGGGCGAGCGGCCCTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCGCACGGCCTGGCGCGCCACCTCGCGGAGACGCACGAGCGCGTGCGCCGGTACAACTGCCACCTCTGCGCCAAGAACTTCGCCAACTCGCAGAACCTCAAGCAGCACTTGCGGATACACACCGGAGAGAAGCCTTTCGTGTGCTCTCATTGCGGGAAGAGGTTCACCCAGAGTGGTTCGTTACACGTGCATCTGAAGACTCACAGTGAACAGTTTCCTTACGAGTGCGCGGAGTGCGGGGCTAAGTTCAGGCTGCGCTCGGGGCTGGTGCGGCACAAGCTGAAGCACACGGGCGAGCGGCCGCACGTGTGCGCGACGTGCGGCAAGGGCTTCCGGCAGCGCCACGAGCTCACTGCGCACACCGCCGCGCACAGCGGCGCCGCGCCGCACGTCTGCGCCGCCTGCCCGCGGGCCTTCCGCCAGCGCCGCGCGCTGCGCCACCACGTGCGGCGCGTGCACGAGGCCGCGCCGCCCGACCTGCCCAACCTGCCCAACCTGCCCAACCTGCCCGAGCTCGGCTACAGCCACGTCGCGCACTACTAA
Protein Sequence: MTVSIKSSPSIEEEIDKLFYTSVRNTLVGFHIDVDEEYTDVEIVCQKCDTKPALTTVCSLAHHIRHDHSPEILNNSVKAFITEYVTFEQVLAEDSDRETLSDTKEKSPIVLPSLRCPFCSSVFSSATRLVYHLNKHVEVSMADGVMCCDVVYSDKKHFVLHLQEAHVDRTADEQVQECVICGFTTETVDELKQHYKDAHNDAKSTKEKKTESPNNQKYIPAVCPECNKTFSNKYNMFAHMRSHTRTAVYPCDKCSRTYRNQGNLTHHKKLAHQGILKFICVECGEAFPSRSERDIHARIHSGETPYKCQHCGKSYRAKNTLTRHLEIHADIRKYESPCDLPEETRSASELSELSDDEPLAKFATKKPAKLYTNFYRALVNFRDHFVNDQHQEDYPDFTDSSVSDAEENVVDRFDDLTQSNMRRDRLDEDTRRELSAARHQEHNKTYYTCALCGKRLSSAHTYVFHRRIHTGERPCVCHVCGKQFRAPHGLARHLAETHERVRRYNCHLCAKNFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYECAECGAKFRLRSGLVRHKLKHTGERPHVCATCGKGFRQRHELTAHTAAHSGAAPHVCAACPRAFRQRRALRHHVRRVHEAAPPDLPNLPNLPNLPELGYSHVAHY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01230874;
90% Identity: iTF_01117584;
80% Identity: -