Amun035957.1
Basic Information
- Insect
- Anorthoa munda
- Gene Symbol
- -
- Assembly
- GCA_945859655.1
- Location
- CAMAOM010001208.1:31392-43193[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.12 14 7.5 0.9 1 23 32 54 32 54 0.95 2 26 0.17 20 7.0 0.1 2 23 82 104 81 104 0.90 3 26 0.00015 0.017 16.6 1.2 2 23 125 147 124 147 0.96 4 26 0.00019 0.022 16.3 3.8 1 23 152 174 152 175 0.95 5 26 1.1e-05 0.0013 20.2 1.0 1 23 179 202 179 202 0.96 6 26 0.17 20 7.0 0.3 2 23 205 227 204 227 0.92 7 26 0.057 6.7 8.5 1.6 2 20 233 251 232 256 0.91 8 26 0.026 3.1 9.5 5.2 2 23 301 323 300 323 0.93 9 26 0.0035 0.42 12.3 0.0 1 23 396 419 396 419 0.92 10 26 0.0024 0.29 12.8 3.2 1 23 462 484 462 484 0.96 11 26 0.031 3.7 9.3 0.1 3 23 513 534 513 534 0.96 12 26 0.0045 0.53 12.0 0.9 1 23 554 577 554 577 0.96 13 26 3.3e-05 0.004 18.7 0.5 1 23 582 605 582 605 0.96 14 26 0.00084 0.1 14.2 0.9 1 23 610 633 610 633 0.96 15 26 0.00067 0.08 14.6 1.1 3 23 637 658 636 658 0.96 16 26 1.8 2.2e+02 3.7 0.5 2 12 666 676 665 678 0.87 17 26 0.015 1.8 10.3 0.6 1 23 724 747 724 747 0.92 18 26 0.017 2 10.1 0.3 3 23 779 800 777 800 0.94 19 26 0.011 1.3 10.7 2.3 2 23 823 844 823 845 0.95 20 26 0.00085 0.1 14.2 1.7 1 23 850 873 850 873 0.97 21 26 0.051 6.1 8.6 0.2 1 23 878 901 878 901 0.93 22 26 0.0017 0.2 13.3 0.7 2 23 907 929 906 929 0.93 23 26 0.0011 0.14 13.8 0.2 2 23 937 959 936 959 0.97 24 26 0.18 21 6.9 0.0 2 23 966 987 965 987 0.95 25 26 3.7e-06 0.00044 21.7 0.6 1 23 993 1015 993 1015 0.92 26 26 1.2e-06 0.00014 23.2 1.3 1 23 1021 1044 1021 1044 0.97
Sequence Information
- Coding Sequence
- ATGACAAAGCACAGTGCTAGTTATCTAAGGAGGAGAAATCTGCAAATATTACTCAACAATACAACGTTGATACCCTTTAAATGGCGAGGCAAATACCTCTGCTTCTATTGCGGAGACGATACGAAGACGCCCGATCGTCTCCGGAAACACACGAAAGGCCACGGACCTTGCAGTGATAGGGACAGAGCTTTACGACTAGTAAAATCAGCTGATGTAGAAATCAAAATAGATGTTTCCGATGTCACTTGCGAGATTTGCTCAGAAAGCTTCCCCTTTTTAGATGAAATTATCGATCATTTGATTTTTAAACACCAATTGCCTTACGAGAAAAATATAGAGATACTGTTAACGGCGTACAGACTCGTAGACCTTCAGTGTCTCCTTTGCGATAAAAGTTTCAACTTCTTACGTAAATTAATCAGTCATATGAACACCACTCATCCTAATAACAGCTTTGAGTGTTCCGAATGTGAAAAGACGTTTAACAAAAAGAGGGATTTAGATTCGCATTTGAGATTCCATCATAAGAAGTACCATTCTTGTACGAAATGCGATGAAACTTTCCCGACGAACTCCGCGCTTCAGATCCACAGGTCTACCGCTCATTCATCAACGTGTAACATCTGCTTCCAAGTATTTTCATCAGACGGAAAAAGGTTAGCTCATCTAAAAGCCGACCATGATACTGAACAAACTAAATGTGGATTCTGCAATAAAGTTCTAACAACAAAACAAGCTTTTATAAGACATGCTGCAAATTGTGAACATAAACCGAAGGAAGAAGCCATCATAATTGATGACGACGACAAAAAGATATCCGTCAAAGAAATACGAAAAGGTTTGGCAGCTATATTTAATATGACCACGGCACTTCCTTTCAAATTCTTTATGAATAGACTAAGATGTTTTTATTGCACGAGAGACTTTACCACTTGCGAGGATTTAAAGCATCATTCGTTGTCCGAGCATCCTCACTGCGATATATCCTTTAAGTCTATGAGGCTACGGAACAGATATGACGGTGTCCAAATCAAAGTTGATACGTCTTCCTTGTCTTGTAGACTATGCCACATCGCCTTGCTGGACTTGAACGATGTGATCGACCATTTGGCCAAAGAGCATAAGGTGAAATGCGACATAACAGTCGAGAGTAATCTACAGCCGTTTAAACTAATTAAAGATAATTACCCTTGTCCTATATGCGGTGAAGTGTACAGGTATTTTGGCGTCTTATTGAAGCACGTTAGCGCGTCTCACAGTGGCAATAAACACATATATGGTCTGCCAGGACCGTACGAAGGCTGTACCTCTGAGCGACGGCGAAAAAACTTGAAAATACTGTTCAACCACACAACCATCATGCCTTTTAAATGGCGAGGCAAATACCTCTGCTTCTACTGCGGAAAAAACTATACAGAGTACACAGAATTTAGGAAACACACAAAATCCCATGGACTCTGCACCACTAAAGATTACTCCCTGAAACTAATCAAAGGCAATAACGTAGAAATAAAAATCGACGTATCTGAGATCGGTTGCGATATCTGCAATGAACCCTTCAGCAGGTTCGAGGAAATAATCGAACATTTGATCTCGAAACACAATATGGAATACAACAAAAATATCGATATACCATTCCAGGAGTACAGATTAGTTGATTTCCGATGTTTGTATTGCGAGGAGCAGTTCACTTACTTTGGATATTTAGTTAAGCATGTTAACAACGTTCACCCACAGAACTGTTTCATTTGTGATGACTGTGGAGTTACTTTCAACAAGAAAAGGGATTTGTCTATACATTTGAGGAATTATCATAGACAAGGAGGATATCCATGTGACATGTGCTTGAAGAACTTCGAAACTCGCCTTATGTTGCGCAGACATCAAAATAATATGCATTTTAGGCACTGCAAGAGCTGTGGCTTACGGTTCGCGTCTCTTTCTCTCTTACAAAAGCATGTACAAGTCGATCATCCACAAAATGAGAACAATATGAAGTGTAGTTACTGCTCCAAAGAGTTCCACACTTCTTTAGGTTCAAAATTCAATACTGTGGAGGACAAATATAAGAAAATGGAAGTCGCCCGTAAGCTCCTAATAAAGCGACGGAATGTAGAGTATGTTTTACAGTATAGCAATGTTACACCTTTCATGTGGCACAAGGGGAAGTATAAGTGCTTTTACTGCAACGAAACTACGAAAGACCCCGTCGTTCTTCGAGAACACACCACAGAATCACACCAATTCGCCAATCTAGAGCTCGTTGTCTTTGACAGAACCAAAAACAACCGAAACAAGGATGCTGCAGTCAAAATTGACGTCACTAATATATGTTGCAAGCTTTGTCCGCAAGCTGTGACGAATTTAGAAGAGCTGATACATCATCTGATCATCGCTCATGATGCAGAGTATGATGTCAGTGTTCCTAACTGTCTCCTACCTTTCAAATTAGACAAGGATCAGCCGACATGCCCGACTTGCAATATGAAATTCGTTTTCTTTGAATATCTACTCCGCCACGCGAATAAGCACCATTTATCCCACCATTACATATGCGACGTTTGTGGCACTAGTTTCCAAGGAGAGAACCATCTGAAAATGCACTATAGGTACTATCACAGAGAAGGTGGCTATACTTGCGAATACTGTGGTATCAGTCTTGCTACTCTATCCAAGAAGATTCTACACGAGAAAAACGTGCATTTAGTCAACTTATCGACCTGTCCGCATTGTCCCGAGACCTTCAAAAGTCCTTATCTAAAGAAGCTTCACCTGGCAAACGTACACGAGATCGAAGAGCTCAAAATCAAGTGCCCATTCTGTCCAAAAGTGTATCCACAAGAGTCTATAATGTCCCGTCATATGAGAAGGGTGCATTTAAGAGAGAAGAATGTTGAATGCGAGGTTTGTGGGGATAAATTCTTCGGTCCTTATGACGTGAAATTACACATGGTCAAGCATAATGGCGAAAAGAAGTTCGTTTGCTCTGTTTGTGGCAAGAAATTCTCCAAGCGAAGTAACTTGAATTCCCATGCCGTACTACATACGAAAGAAAAGGACTATGTATGTGAAGTTTGCAATAAAGCATTTGCACACCAGACGAATTTGCGAATGCATATCCGTAATAGACATAGTCGGTTCGATCTAGCTCCAATAGTTGAAGAGATTGACGAAAACGATATGGTACAAATGGAGATCATTCAAGAGGAGTTAGAAGGCGAAGTGGCAGGACAATATATTCAATGA
- Protein Sequence
- MTKHSASYLRRRNLQILLNNTTLIPFKWRGKYLCFYCGDDTKTPDRLRKHTKGHGPCSDRDRALRLVKSADVEIKIDVSDVTCEICSESFPFLDEIIDHLIFKHQLPYEKNIEILLTAYRLVDLQCLLCDKSFNFLRKLISHMNTTHPNNSFECSECEKTFNKKRDLDSHLRFHHKKYHSCTKCDETFPTNSALQIHRSTAHSSTCNICFQVFSSDGKRLAHLKADHDTEQTKCGFCNKVLTTKQAFIRHAANCEHKPKEEAIIIDDDDKKISVKEIRKGLAAIFNMTTALPFKFFMNRLRCFYCTRDFTTCEDLKHHSLSEHPHCDISFKSMRLRNRYDGVQIKVDTSSLSCRLCHIALLDLNDVIDHLAKEHKVKCDITVESNLQPFKLIKDNYPCPICGEVYRYFGVLLKHVSASHSGNKHIYGLPGPYEGCTSERRRKNLKILFNHTTIMPFKWRGKYLCFYCGKNYTEYTEFRKHTKSHGLCTTKDYSLKLIKGNNVEIKIDVSEIGCDICNEPFSRFEEIIEHLISKHNMEYNKNIDIPFQEYRLVDFRCLYCEEQFTYFGYLVKHVNNVHPQNCFICDDCGVTFNKKRDLSIHLRNYHRQGGYPCDMCLKNFETRLMLRRHQNNMHFRHCKSCGLRFASLSLLQKHVQVDHPQNENNMKCSYCSKEFHTSLGSKFNTVEDKYKKMEVARKLLIKRRNVEYVLQYSNVTPFMWHKGKYKCFYCNETTKDPVVLREHTTESHQFANLELVVFDRTKNNRNKDAAVKIDVTNICCKLCPQAVTNLEELIHHLIIAHDAEYDVSVPNCLLPFKLDKDQPTCPTCNMKFVFFEYLLRHANKHHLSHHYICDVCGTSFQGENHLKMHYRYYHREGGYTCEYCGISLATLSKKILHEKNVHLVNLSTCPHCPETFKSPYLKKLHLANVHEIEELKIKCPFCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDVKLHMVKHNGEKKFVCSVCGKKFSKRSNLNSHAVLHTKEKDYVCEVCNKAFAHQTNLRMHIRNRHSRFDLAPIVEEIDENDMVQMEIIQEELEGEVAGQYIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01118585;
- 90% Identity
- -
- 80% Identity
- -