Basic Information

Gene Symbol
ct
Assembly
GCA_945859655.1
Location
CAMAOM010000155.1:367709-396349[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6e-27 6.5e-23 81.7 0.0 3 70 242 310 240 316 0.94
2 3 1.9e-32 7.6e-28 97.5 0.0 4 77 641 715 639 717 0.96
3 3 2.7e-31 1.1e-26 93.8 0.0 3 75 843 916 841 920 0.95

Sequence Information

Coding Sequence
ATGTTCTTTTTACGTAAACTAATCAACAAGAACAAGCACACAATCATCACAAACAATCATCACATCATCAACATCTCATCTGCACTAACAATCAGAAACGGCATAAAACTTGAATTGGAAAAACGGCCGTCTCAAGACATCGCCCAACTAGTAGAAGACGTGCGCCGTCTCCAAGCATCTCTGACAGCGCTGCAGGAAGCGCATGCTCAGCAGTTGCAGCGGCTAGAGGAGCGACTGGATGAGAAAAAGCAGCACATCGCCAGGCTTGAAGCGAGGCTCGACACGCAGAGAGACTATGATGATATCAAAAGAGAAATCAGCATGCTCCGAGCACTCGACCTGGGCGGTGGAGAGAGATCTTTAGAGCGAAAACCTGAAATTCGCTCGCCGAGCACCGCACCTTCGCTCCGGGACCATTCAGCCGAGAGAGAGCGAAGTGCCGAGCGCCGCGATACAGGTGTGGAGGAGTGGCCCAGCACGCCGCCGCCGCTCAACAACAACACCACTCACCACAACAACAACGGGCCCATGCCGCTGCCGCTGCCGCCGCCAAGCCCTTTCCGCTTCGAGGAGCACCGTACCTACAGATTCGCGGAGGACATGGGACCGCTGCCACCTGGCGCGCTGGTCGGACGCCTCGGAGACTCCCTCATCCCCAAAGGCGACCCGATGGAGGCGCGACTGCAGGAGATGCTAAGATACAACATCGACAAATATGCGAACACCAACCTGGACACGTTGCATATAAGCCGGAGAGTGCGAGAATTGCTGTCGGTCCACAACATTGGACAGAGGCTGTTCGCTAAGTACGTACTGGGGCTGTCGCAAGGCACGGTGTCGGAGCTGCTGTCCAAGCCCAAACCCTGGGACAAGCTGACGGAGAAGGGACGCGACTCGTACCGCAAGATGCACGCGTGGGCCTGCGACGAGGCCGCCATCATGCTGCTCAAGTCACTGATCCCTAAAAAAGTCGGAACGAAGGATGGCACCGGAGCAGTATTCGGTCGTCCGGAGGGAGAGGGTGATGACAGGCTCACGCACGCTATCTTGAGTGAAGCGCATATGATGAAGACGCCTAGTGGACCTCCCCACAACGATGACTCCAGAAGCAATGAGGACTCCAGCTCGCCGAGGACTCAGTGCCCCTCACCTTTCTCCAATAAGGACGGGAGTCAAAACAGAAGACTTAAGAAGTATGAGAACGACGACATTCCTCAAGAGAAGGTGGCGCGCATATACCAGGAGGAGCTTGCCAAAATCATGACCAGGAGAGTAGAAGACATCCGCCGCGAAGGTTTCCCTGGCATGTTTCCTCCTTTTTTCAGCGGCGGCATGCCACCACACATGGAGAGGCCACCGGAAGACATCCGCATGGCCCTGGAAGCGTACCACAGAGAACTTGCCAAGATCCAGCCTACTGGCAACATTCCCAGCCTGCACAACTTGCCAGCCATGCCGCCCTTTCCCAACCTTCTCGCGTTGCAACAGCAAGCGATGCAACAAGCACAGAACCAACAGATGAATGGCTCAGGAGCGGTCCAAGATCTCTCTTTGCCAAAAGACAAAAACGCCAAAATGAATGGAATGACTGATAGTGATAAGGAAAGGTCAATGGATGCCGAAGAGGCTATTAGGCACGCGGGGAGCGCCTTCTCGTTAGTGAGGCCTAAACTAGAGCCGGGACAGCAATCTACGGGGTCGTCCGCGTCCAGCCCACTGGGGAACGCGATACTACCTCCCGCAATCACTCCAAATGAGGATTTCAGTAATTCAGCGGCAGCAAGCCCACTACAGAGGATGGCGTCGATCACGAACAGTCTCATCTCCCAGCCATCAAATCCTCCTCATCATCCTCCAGTACAGAGGTCGATGAAAGCAGTTCTTCCACCAATCACACAGCAACAATTTGATCTCTTTAACAATTTGAACACTGAAGATATAGTGAGGAGAGTGAAAGAGGCTCTTAGCCAGTACTCCATTAGCCAAAGACTTTTCGGAGAATCCGTCCTTGGTCTATCACAAGGATCCGTGAGTGACTTGTTAGCGAGGCCGAAGCCCTGGCACATGCTCACGCAGAAGGGACGAGAGCCTTTCATCCGCATGAAGATGTTCTTGGAGGATGATAACGCTGTCCACAAATTGGTTGCATCACAGTACAAAATCGCGCCGGAAAAATTAATGAGGACTGGAAACTATAGCGGAGCACCTCCTTGTCCGCCAAATATGAACAAACCTATGCCGCCAACACAGAAGATGATTTCCGACGCGACCTCCCTGCTGAGCAAGATGCAGCAGGAGCAGCTGCTGGGCGCGGGCCACCTGGGCCACCTCGGGACGCCCACGCCGCTGCTGCTGACGCCGCCCGGCTTCCCGCCGCACCACGCCGTCACGCTGCCGCCGCAGCACCACGACAACAACAAGGAGCGCAAGCCGCCGCCGCCCCCGCAGCCGCACCACCAGCCCCCCATCATGCGCAGCCTGCACCAGCACATATCGCCAAGCGTCTATGAGATGGCCGCGCTCACGCAAGACTTAGACACTCAAACAATTACGACCAAAATTAAGGAAGCGCTCCTGGCGAACAACATTGGCCAGAAAATCTTCGGCGAAGCCGTTCTAGGTCTATCACAGGGTTCTGTCAGTGAATTGCTATCAAAACCGAAACCCTGGCATATGCTCAGCATTAAGGGTAGGGAACCATTCATTCGCATGCAGCTATGGTTAAGTGATGCCCACAATATTGACCGCCTTCAGGCTTTGAAGAATGAGAGACGAGAAGCGAGTAAACGACGACGGTCCAGCGGCCCCGGACAAGACAACTCGTCTGACACATCGTCGAACGATACGTCAGAGTTCTACCACTCCAGCTCGCCGGGCCCCACCGCGGGAGCGCCGTGTGCCAAGAAACAACGAGTATTGTTCTCCGAAGAACAGAAGGAGGCACTAAGATTAGCATTCGCACTCGACCCTTACCCAAACATGCCAACGATCGAATTCCTCGCCGCAGAATTGGGTCTATCATCGCGAACCATCACCAACTGGTTCCACAATCACCGCATGCGGCTAAAACAACAGGCACCTCATGGCTTGCCGGCCGAACCTCCCGCGCGGGATCAGTCTTCGGCACCTTTCGACCCAGTCCAGTTCCGACTTCTCCTCAATCAGAGACTACTGGAGCTGCAGAAGGAGAGGATGGGTCTTGCTGGCGTACCCCTACCGTACCCGCCGTACTTCGCAGCCAACTCCAACTTAGCGGCACTGATTGGTCGCGGGTTAATACCTCCCGAAGACCGGGTGAAGGACCAATCTGGCGGCCTCGACCTCTCGATGCCACTGAAACGAGAACCCGATGGTGATGACTTTGAGGACGATGACGTCGAGAGCAACCTCGGCTCCGAGGACTCGTTGGACGAGGAATCTAAGACTGAGCCGAAAGCGGCGTCGACGCCGCACGCTACAGGGCGATCCAGCAGACGAAAGCCCGCAGCGCCGCAGTGGGTCAACCCTGACTGGCAAGATGAGAAGCCGCGTAACCCTGACGAAGTGATAATCAATGGAGTTTGTGTGATGCGAAGTGATGACTTTCGGAGAGAATCCGAGGAGACGGTGCGTGTAGAGCCGTCGCCGGTGGCGCGCGAGGGCTCGCCGGCCGCGTCGCCCGCGCCGCGCACGCCGCTCACGCCGCACACGCCGCACGCGCCGCACGCGCCGCACACGCCCCACACGCCGCACACGCCGCGCCCGCCACATACGCCTGACGATGTGATCCCCGAAGACAAAATCAAATCCGAGACCGACGACGGTTGGGAGTACTAA
Protein Sequence
MFFLRKLINKNKHTIITNNHHIINISSALTIRNGIKLELEKRPSQDIAQLVEDVRRLQASLTALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRALDLGGGERSLERKPEIRSPSTAPSLRDHSAERERSAERRDTGVEEWPSTPPPLNNNTTHHNNNGPMPLPLPPPSPFRFEEHRTYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTGAVFGRPEGEGDDRLTHAILSEAHMMKTPSGPPHNDDSRSNEDSSSPRTQCPSPFSNKDGSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPTGNIPSLHNLPAMPPFPNLLALQQQAMQQAQNQQMNGSGAVQDLSLPKDKNAKMNGMTDSDKERSMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGAGHLGHLGTPTPLLLTPPGFPPHHAVTLPPQHHDNNKERKPPPPPQPHHQPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEDRVKDQSGGLDLSMPLKREPDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPHATGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRRESEETVRVEPSPVAREGSPAASPAPRTPLTPHTPHAPHAPHTPHTPHTPRPPHTPDDVIPEDKIKSETDDGWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_00445005;
80% Identity
iTF_00111517;