Basic Information

Gene Symbol
kn
Assembly
GCA_945859655.1
Location
CAMAOM010000096.1:1860895-1872752[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.7e-143 7.8e-139 464.8 0.0 183 387 39 260 35 263 0.99
2 2 4.9e-08 0.00049 19.7 3.9 420 469 269 320 261 425 0.77

Sequence Information

Coding Sequence
ATGCGGGAACAGATGTGTGGCGCCGCGGGCACCACAAATACGTTCGCGCGGTACCAACGCCGCTCCTATCTGGATACGTTTTTACTATTTGTATGGAGCTGTTGTAACGCCTGGTTTTTCTTGAAGTTCTTTCTGAAATGCAACCAGAATTGTTTGAAGAATGCTGGGAACCCTCGGGATATGAGAAGGTTTCAGGTGGTCATTTCAACGCAAGTAATGGTGGATGGTCCTCTCCTAGCGATATCAGACAACATGTTCGTGCACAACAACAGCAAGCATGGAAGAAGGGCGAAGAGGCTGGATCCTAGCGAAGGTACAGATGGCGCCAGCGACAATACTTCAGGTCTATATCCTCCTCTTCCGGTAGCCACGCCATGCATCAAGGCGATATCACCGAGCGAAGGCTGGACGTCGGGAGGGTCGACAGTGATCATAGTTGGGGACAACTTCTTCGACGGACTACAAGTTGTTTTTGGGACCATGTTGGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTGCAGACCCCTCCGCGGCACATACCCGGCGTGGTGGAAGTGACGCTGTCGTATAAGAGCAAGCAGTTCTGTAAGGGCGCGCCTGGCAGATTTGTTTATGTTTCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCAAGACATCCCGGAGACCCGGAAAAATTACCTAAGGAAATAATCCTCAAAAGAGCGGCGGACTTGGCGGAGGCACTGTACTCGATGCCTCGTAACAACCAGTTAGGTCTGGGCGCGCCGCGGTCTCCACCTGCCAGCATGCCTTTCAACTCGTACACAGGACAGTTAGCTGTCAGTGTACAGGATACTGCGGCCTCGCAGTGGACTGAAGAGGAGTACGCGCGCAGTGGCGGCTCGGTATCGCCGCGGTATTGCTCTGCCGCGTCGACACCGCACGCGGCGCCCGCAGCCTACCCGCATCCACAACACTACCCCGCGCCGCCGACCTCACTCTTCAATACTACTTCTCTGTCTCTAGGACCGTACCATCCAGCGAACATGAATGGACACTTGTCATCTGACCGCCACTATAACGCGTATAATACGAAAGATAGCGGTCATTACAGTGAAAGAAATGGGAATTCTAAGAGCCTGCCCGACTGTCCGGTAAACACTCATACAAAATGCACCGGCAGCGATATGAAAGGGGCTCAGAATAAAGAGTCTAAGCTGAGAAGCGCCTTTGCCGTTGTGAGGCAGAGTCCGCCACGGGTTGCCAATGAGCTCCATCAGAATTGGCACCACCTCGCAGTTCAGTGTTAG
Protein Sequence
MREQMCGAAGTTNTFARYQRRSYLDTFLLFVWSCCNAWFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDGASDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSLPDCPVNTHTKCTGSDMKGAQNKESKLRSAFAVVRQSPPRVANELHQNWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-