Basic Information

Gene Symbol
-
Assembly
GCA_945859655.1
Location
CAMAOM010000225.1:325665-327298[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0065 15 7.2 0.1 47 86 102 141 99 142 0.81
2 4 0.015 35 6.0 0.1 51 83 201 232 158 236 0.77
3 4 0.072 1.7e+02 3.8 0.1 50 83 291 323 278 325 0.81
4 4 0.011 25 6.5 0.0 49 83 391 424 367 427 0.89

Sequence Information

Coding Sequence
ATGGACATCAACAATTCCCATAACCAAAGTTACTGGTTTGTCCTCAGGGAAGATCAAAGTAATGTCTTATTCAGTAGCAACAACTTCACCATACAGAATCCACAAATTACAGGGCAGGAGGCGAGATATATCGTGGATACGGGGGATAACAGACAATACATACAAATAAATGAGACCCCCGTAGCTGTACAAGAAAATATTTCTGAAAACGGTGACAAGGAGGTATTAAAAGCCAAAGATGACAACTTTTGGGATAGAAATAAAATTAGAATACTTCTTACTTTGTGCTTAGACAGCAGATTTAAACACATGACAAAGGATAAATCTCTCTGGGAAGAATTTGCTTTGCACTTAGGTACAAATTCAGATGAATGTAGTAAAAAATATAGAAACTTGAGGAGAACTTACATAAGACTCTTGAAAAAGAAAAGATTGGGCAAAGAGGTCAAATGGGTACATTACAACACCTGTGAAGAGGTATTTAAAGAGTGCCAAGCACTTGGAGCCTCTCCATTAGAGCCATGGGAAGACCACAAAGTGAGAAGATTGCTCAGTCTCTACTTAGAGAACTTGAACAAGTTCCGTAGTCCTGACTACTTGCAAAAAGATGTTTGGAGGGAGATTGCATCAGAGTTAGGAACAACAGAGTGCAATTGTTACTATAAGTTCAAGAATTTAAAAAGAGCTTACTTCAATTGGAAAGAAAAGAGTATAGAAACTGGTAAACCAATCAAGTGGCAATATCATAACTATTTTGAGAGAATATTTTATGATTACAATCAGACTAAAGGTCCCTGGGACAAAAATAAAACTAGGTTGCTAATAGAAGAGTACAAGCAAATGGCTGATAAGTTTAAAAACCCAAGATACCAAAAGAAAGAGTTGTGGAAACAGATATCGGCATCAGTAGGGGAAAGCCCCAATGACTGTGACAAAAAGTTCAGAAATTTGAAACAAACTTATATTAGATTGAGAATGAGAGCAGATACAGGGAGATGTATGACTAAGTGGCGCTACTACAGGGATTTTGAAGGAATATACAGTGGGCAGGTTAGCTATTCAAGCACCACTGATGAACCACCTAAAGCATCTTACAAATCACAAGATGATTATGTCAAGCAGCTTTTAACATTCTATGTAGACAATAAGGAAAGATTTAGAGATCCTCTAGTCAAAAGGAAAAATGTATGGAGATTGTTAGCTACAAAAATAGGCTTGTCTCCAGAAGAATGTGATCGAAAATTCCGCAACTTGAAACAAACTTACATCAGACTATCTGAGAAAAAGAAAGAGACCGGAAAGATTAACAATTGGCCATACTATTCATACTTCGAAAAAATATTTGAGGAACCCAAAGGAACACGTACTGGCAGCTGTGATGGGAAATTCGATGACATGACCATTACTGAAATAAAGCGAATGATGCAAGAAGTGCAGGATAGTAAAGACAATGACAAGTTTGAAAGTTTGGTGAGAGCTGTGGAAGAGTCCAACAGCATACAACGAGAACGAAATAGAATCTTACAGGCATTGTTGGATAAAAAATGA
Protein Sequence
MDINNSHNQSYWFVLREDQSNVLFSSNNFTIQNPQITGQEARYIVDTGDNRQYIQINETPVAVQENISENGDKEVLKAKDDNFWDRNKIRILLTLCLDSRFKHMTKDKSLWEEFALHLGTNSDECSKKYRNLRRTYIRLLKKKRLGKEVKWVHYNTCEEVFKECQALGASPLEPWEDHKVRRLLSLYLENLNKFRSPDYLQKDVWREIASELGTTECNCYYKFKNLKRAYFNWKEKSIETGKPIKWQYHNYFERIFYDYNQTKGPWDKNKTRLLIEEYKQMADKFKNPRYQKKELWKQISASVGESPNDCDKKFRNLKQTYIRLRMRADTGRCMTKWRYYRDFEGIYSGQVSYSSTTDEPPKASYKSQDDYVKQLLTFYVDNKERFRDPLVKRKNVWRLLATKIGLSPEECDRKFRNLKQTYIRLSEKKKETGKINNWPYYSYFEKIFEEPKGTRTGSCDGKFDDMTITEIKRMMQEVQDSKDNDKFESLVRAVEESNSIQRERNRILQALLDKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00973738;
90% Identity
iTF_01116955; iTF_01118044;
80% Identity
-