Basic Information

Gene Symbol
arid5b
Assembly
GCA_945859655.1
Location
CAMAOM010000549.1:788343-808159[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-14 1.1e-10 42.9 0.0 3 89 236 309 234 309 0.89

Sequence Information

Coding Sequence
ATGTTATTAGAGATAAACCTCAACGACGAAGTGCTAGCCATCAATGAGAAGGTGGTGGTCCGCGCGGACGACTTGCTGTCCTGGATGTGCGTGGGCACGGAGTGGCACTGGGGGCTGCGAGCCGTGTGGCGCGGCGCCTGCGCTCCGCCGACCGAACTGCCGCGACACGCGCCTCTCACGCACACGAAGCTGGACTTCAGTGATGTGGATACCGAGAAGAGTGCTATTGTGGTGGATACAGAAGCACCAGGAGTCGTGGTCTTCTCGTACCCTCGGTACTGCCGCTACAGGGCGCTGATAGCCAGGCTCGAGGGCATCCAGGCGAGCTGGCTGCGGGACTCTTTGGTGGCGGCGCTGGGGGGATACGCGGCACCCACCAACAACACCAGGATACTGTACTGCAAGGACACATTCGAGTACCCCGAGCTAGAAGGGCACGAGTTTGTCTGCAACCACCTCGCTCCGCGCCTGAAGGGCCGCCCGCGCGGCCGCCGGCGCCGCGCCCTGTCCCGTGACCGCGCGCACGACCCGCGCGACCTCCGCGACGGCTCCGACCGGAGCGACTCTGACGACGCGCCTGCGACAGGACCTGCTGGGCCTAGCGATCCGCCGACGCCCCGTCGTCTCTCCCTCCGCAACGGCGCCCCTCCTGCCAGCGACGAAGATGAAGAGGACTACAAACGAGTGGAACAAACTCCTGAAGACAGGACCTTTCGGCAGCAGCTGAAGATGTTCTACAAGAGTCGCGGTGAGCCCTTCAAGAGCGGACACACTCTGAAGCACTTGTCTCTGCGCGCGCTGTACTGTGGCGTGACGTCACGCGGCGGCTACGAGGCGGTGTGCCGGCGCCAGCAGTGGCGCACGGTCAGCGCTGACCAGCCCGCCCGCACGCGCCGACACTACGAGAGGTTCCTCCTCCCCTTCGAGAACCACGAGCGACGCAATGGCTCATCGCTTTCGCTCAAGTTGAACGGCAAGGTCTTAGCCGAGCCGCGCACCATCGCCACCATCGACGTCACGGACTCTCCCCACAGGGACGATGACAAGCAACTTCGCACACCCTCCCCGCAGCCCCTCCTCGACCCGTACGACAAACTCGACAGATACGACAAAGCCGACAGATACGACCAACACGACCGATACGCCAAGTACGACAAACCCGCCATCGACAGCGAAACCGGAGAACTAACCACCAAAGATGATATAATAGTCAAAAACGCAGAAGAATTGAACAGAGAGTTCTTAGAATCTCTGCCCAAAGAGGAGAAGACGGTTAAGATTTCGGTGAAACCGGTTGAAAAGTTGATCGAACCGAAAGTTTTCGAGGGTAGTCTGGAGGTGAAACCGGGAGAGGGAATGAAGGAAGAGGGAAGGGACTTTAGTCAGAACTATTTGAGTGATATGCAGAAGTTTAGTATGGGAGCAGAGTCCCTATCGTCCCGGCCGACACCTCTCAATGGTCACGCGACACCCGCACCCACCGACCTTAAGTCGTGTCGCCCGGCGGGACGCTCGTCTCTGCGCGCGGTGCGCGTGAAGCCGGCGCGCCCGCACGCTCAACTCACGCCCGCCAGTACACCGCCCGCGTGTCTCCGGGAGTCTCCCCCGGCGAACTCGACGCCCGTCACCAACTTCGGCATCCACCACCCGCCGCCGCCGCCTCCACATCTTGACGACGATATCGTGGAGGTTCCTTACAAGCCAAAAAGCCCAGAAATCATCGACTTAGACGAGTACCCTGAAAGCCCTCAGGCAGTGAAAAAGAAGAAGCTCGACATCCTGAAGGAGCGAGGCTTGGAGGTGACCGCCCTGCCGCCCCCCTGGCCAGCCGCCCTGCCCGCCGCCATGCCCGCCAGCCCGCACGTCATGGCGCCGCCCATGATGCTCAACCCTGCAGTCCAGCACCAGATCATGACGCAAGCACAGATCTTCCAGATGTACAACATCATCCCGGCTAACTACAACGGCATTCAGCCTCCTAAAGTCATCCAAGCGTCTTCTATCTTCGGCAACTCGGGGCCTGAGAAGACTGTGTATGGGAACCCGAAGGATCCCTTCATGCCTCCCCCGCATTTAGTCCACGGAGCGCCGCTCAAGCCTCTGAAGACTGCTCCCCCTCCAGCCCTTCCTCAAGACATCCTCGACCTGACCTGCAAAGCCTCCAGCCCGGCTGTCGAGATCTCAAGAGTTGCCTCCTGTGTCACCCCCCCACAGAATCTTACAAATAACTACACTCTAGTCGACGGCAAGGCAGTTGTCGGTTCCAACTTAGAAATTACTCTAGTCAATAAAGCCGAATCGGCTGGACAGAGCAAGAACCGGCCACCACAGAAGAGATCCAGCAATGGGAAGTTCGTGTCAGCTAAAACTCCTACCCCGCCTAAGGAGCCCTACCCCAAATATGCTTCTAGCACAGCGCAGAAGAAGCCACCGATAAACATCCCGAACTACCAGGTCAGAGAAGACTCCCAAACCCAGAGTCAGCTTCTTCAGAACGCGATGAGCAATCAGAATCTAGCTCAGATAATGGATTTACAGAAGAGTTCAGTTCCTATGAGCTCGTTCATGGACCCTTACGTGGCGTTGTACAGCAGTCTGGCAGGTCAGGTGGACCAGAGGCAGCTGGCCATGTACCGCGACCTGATGAGCAGCCAGTTCCGCTACCCAGGGTTGCTTAACCTTGGCGTGGCGACTCCCACCACGAAGAATTAG
Protein Sequence
MLLEINLNDEVLAINEKVVVRADDLLSWMCVGTEWHWGLRAVWRGACAPPTELPRHAPLTHTKLDFSDVDTEKSAIVVDTEAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRALSRDRAHDPRDLRDGSDRSDSDDAPATGPAGPSDPPTPRRLSLRNGAPPASDEDEEDYKRVEQTPEDRTFRQQLKMFYKSRGEPFKSGHTLKHLSLRALYCGVTSRGGYEAVCRRQQWRTVSADQPARTRRHYERFLLPFENHERRNGSSLSLKLNGKVLAEPRTIATIDVTDSPHRDDDKQLRTPSPQPLLDPYDKLDRYDKADRYDQHDRYAKYDKPAIDSETGELTTKDDIIVKNAEELNREFLESLPKEEKTVKISVKPVEKLIEPKVFEGSLEVKPGEGMKEEGRDFSQNYLSDMQKFSMGAESLSSRPTPLNGHATPAPTDLKSCRPAGRSSLRAVRVKPARPHAQLTPASTPPACLRESPPANSTPVTNFGIHHPPPPPPHLDDDIVEVPYKPKSPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPPWPAALPAAMPASPHVMAPPMMLNPAVQHQIMTQAQIFQMYNIIPANYNGIQPPKVIQASSIFGNSGPEKTVYGNPKDPFMPPPHLVHGAPLKPLKTAPPPALPQDILDLTCKASSPAVEISRVASCVTPPQNLTNNYTLVDGKAVVGSNLEITLVNKAESAGQSKNRPPQKRSSNGKFVSAKTPTPPKEPYPKYASSTAQKKPPINIPNYQVREDSQTQSQLLQNAMSNQNLAQIMDLQKSSVPMSSFMDPYVALYSSLAGQVDQRQLAMYRDLMSSQFRYPGLLNLGVATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
80% Identity
-