Agla000374.1
Basic Information
- Insect
- Anoplophora glabripennis
- Gene Symbol
- nfxl1
- Assembly
- GCA_000390285.2
- Location
- NW:379775-385960[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3 1.5e+04 -7.8 5.6 15 19 165 169 164 169 0.81 2 18 0.2 9.4e+02 -0.3 0.4 4 10 200 206 199 206 0.95 3 18 2.1e-07 0.001 18.8 17.3 1 19 214 231 214 231 0.99 4 18 2.3e-08 0.00011 21.8 18.6 1 19 267 285 267 285 0.99 5 18 2 9.9e+03 -3.6 1.0 6 10 310 314 309 314 0.88 6 18 1.9e-10 9.1e-07 28.5 11.5 1 18 320 337 320 338 0.98 7 18 1.9 9.3e+03 -3.5 1.0 5 10 362 367 362 367 0.86 8 18 6.5e-07 0.0031 17.2 10.7 1 18 373 390 373 391 0.97 9 18 8.3e-05 0.4 10.5 17.1 1 18 425 442 425 443 0.94 10 18 1e-10 5e-07 29.3 12.3 1 18 452 469 452 470 0.98 11 18 1.2 5.9e+03 -2.9 0.9 5 10 498 503 498 503 0.93 12 18 0.00012 0.57 10.0 5.7 9 19 518 528 516 528 0.90 13 18 0.036 1.7e+02 2.0 6.1 4 12 540 548 538 548 0.90 14 18 3 1.5e+04 -6.9 4.5 14 18 576 580 576 580 0.86 15 18 0.0021 10 6.0 6.4 1 12 617 628 611 628 0.80 16 18 3.4e-06 0.016 14.9 20.3 3 19 658 674 657 674 0.94 17 18 3 1.5e+04 -6.8 3.1 10 13 681 684 680 684 0.68 18 18 5.3e-07 0.0025 17.5 12.9 1 17 717 735 717 737 0.86
Sequence Information
- Coding Sequence
- atgaGCAGCCGCTACAAATCTACAAATCCTTGGAATAAGAACGTTCAGCAGAAAAAAGCGAAACCGAATGCTTATAACCTAGAAAACTCTTCACCAACCCCTTCTGAAATTAAATTCAAAGAGGCTCATTCGAAATTACAGGCAACAgttaaaaaacatgtaaaagatTACGAATCTTCTTCTGAGGAAGAAGAATTAGAATCAAGTGATTTAATTGaggatattttgaaaaattataagaatACCGGAGCAGAAAATGAGAACCTAGTCCGCACTCAAACTTTTATTGAAGAAGCTTTTCTCTCGGGCGCAGCCACTTGCCTTATCTGCATTTCAAGAGTTAAAAGAGACGATGCGATATGGAGTTGCACAAGTTGTTATGGATTCTTCCATATAATGTGTATCCAAAGATGGTCCAAAGACACGATAACTCAACAGAAACAAGCCTTAGAAATCCCTCTCTTGGACCAGCAGGCTAAACTTTGTTGGTGCTGCCCAAAATGCCGATACGAATACAAGTCGGAAGACATTCCAACtaaatatttgtgtttttgtaaGAAAACCGAAAACCCTAAATTTCAACCGTTCCTGGTCCCTCATTCGTGTGGGGAAATATGCAAAAAGGATCTGATTCCTACTTGTGGACATCAGTGCTTGCTTCTCTGCCATCCAGGCCCGTGCCCACCATGTCCCGTTACCGTAAATGTTTCGTGTTACTGTGGTTCGCAACCGCCTAGAACTCAAAGATGTAGTAAGAAGGAATGGTCCTGCGGTAGTGCATGTGGGAAAACTTTGGGGTGCGGGAAGCACTCTTGTACCGAGCCCTGTCATCCCGGTGAATGTAAACCGTGCCCGAAGAAGAGCATACAGAGATGTTTGTGCAAGTCCCAGCAGAAATTGAGGGACTGCGCCACTCCAACGTGGCAATGTGACAAGgtatgtaataaaCCATTACAGTGCGGGAATCACAAATGTCAAGAAGTGTGCCACGCTGGAAAATGTGACAGCTGCGTTTTAAACAAACCAAGGTCTTGCCCGTGCGGTAAGACAACGTACCAGATGCCTTGCACAGAGGACACCCCGACTTGTCCTGATACGTGCGATAAACTCCTCGAGTGTGGCATACATAAATGTAGTCAGAGATGCCACAAGGACAAATGCGGAGTGtgtcTGGAGAccgtaataaaatattgtagatgcGCCCTACACTCCAAAGAGGTGCAGTGCTACAAGCCGTTTTTCTGCGAGACGAAGTGTAAGAACATGAAGGACTGCAACAAGCACCCCTGCAACAGAAAGTGCTGCGACGGTAACTGTCCGCCGTGCGAGAAACCGTGCGGTCGCACCCTGAACTGCGGCAATCACAAATGCAATTCGGTTTGCCACAGGGGGCCTTGTTATCCGTGCGCCCAGACCGAAGAAGTATTCTGCAGGTGTGGGGCCACCAAAATTACAGTGCCTTGCGGACGGAAAAATAAGACGAAGCCTCCGAAGTGCAACAAGATTTGTTCCATCCCGCCGGACTGCCACCACGAAAAGAGAGAAAACCACAAATGCCACTTCGGGGACTGTCCCCCGTGCCGCCAGGTGTGCGACAAGCAGAGATCGACCTGTCCGCATAAGTGCAGCGCTTCGTGTCACTCTGCCGTTCTCGTGAAAATCGAAGCACAGCGAGCCTCCATGCCTTGGGAACAAACCAAACCGCAGGTGGAGAAGAGGGCTCTACCCTGCCCGGACTGCGTGGTTCCGGTGCCCGTAACGTGTTTAGgTGAACATGAAACTGCCAATTGGCCGTGTCACTTAGCTAAACCATCGAGTTGTCACCGTCCGTGTGGGAGAATGCTTGGATGTGAGAATCATACCTGTTCGTTGCCGTGTCACACCGTCGAATCGGCGCCGGACAAAATAAAGGCCGGCACCAACTGCGAACAGTGCGAAAACGACTGCACCAAAGAGAGGCCCGAGGGTTGCCAACATTCCTGCCCCAAGCCCTGCCATCCGGGGCCGTGCCCGCCGTGTAAAAATATGCTGCGCGTCAAATGCCACTGCGGGCTCAATCAGCCTTACATCCGGTGTAGCGACTGGATCGATCCTAAGAAGAGGGAGGAACTGCAGAGCTGCGGCAACCAGTGCCCCAAAAATTTTGACTGCGGCCACCGATGTAAAGCCATCTGCCACGCAGGGCCTTGCCCGAACCCGGAACAATGCAAGAAGAAAGTCAAAGTCACTTGTAAATGCAGGAGGATCAAGAAGGAGTTTTCTTGCGAGAGCGTGCGTAAGAATACCGCGGTCGTGGAGTGCGACGAAGCGTGCAAGCAGAAACAAGAAGAGGAGAAGAAAGCGAGGGACTCTCTGAACGAGCAGAAGAAACTGGAAGAGGAGCTGAGAAACAAGAAGGAACTGGAGAAGTACCAGAAGATGTTCGAGGGGAAAAAGAAGGGTAGGGCTAGGAAAGTGTACGAGGAAGAGGACGAGGCCGGTTTTATTACGAAGTACCGGTTTGTTTTGTTGCCTGTTTTCGTTTCGCTTATCGCTTTGCTAGCgtattttatctttaattaa
- Protein Sequence
- MSSRYKSTNPWNKNVQQKKAKPNAYNLENSSPTPSEIKFKEAHSKLQATVKKHVKDYESSSEEEELESSDLIEDILKNYKNTGAENENLVRTQTFIEEAFLSGAATCLICISRVKRDDAIWSCTSCYGFFHIMCIQRWSKDTITQQKQALEIPLLDQQAKLCWCCPKCRYEYKSEDIPTKYLCFCKKTENPKFQPFLVPHSCGEICKKDLIPTCGHQCLLLCHPGPCPPCPVTVNVSCYCGSQPPRTQRCSKKEWSCGSACGKTLGCGKHSCTEPCHPGECKPCPKKSIQRCLCKSQQKLRDCATPTWQCDKVCNKPLQCGNHKCQEVCHAGKCDSCVLNKPRSCPCGKTTYQMPCTEDTPTCPDTCDKLLECGIHKCSQRCHKDKCGVCLETVIKYCRCALHSKEVQCYKPFFCETKCKNMKDCNKHPCNRKCCDGNCPPCEKPCGRTLNCGNHKCNSVCHRGPCYPCAQTEEVFCRCGATKITVPCGRKNKTKPPKCNKICSIPPDCHHEKRENHKCHFGDCPPCRQVCDKQRSTCPHKCSASCHSAVLVKIEAQRASMPWEQTKPQVEKRALPCPDCVVPVPVTCLGEHETANWPCHLAKPSSCHRPCGRMLGCENHTCSLPCHTVESAPDKIKAGTNCEQCENDCTKERPEGCQHSCPKPCHPGPCPPCKNMLRVKCHCGLNQPYIRCSDWIDPKKREELQSCGNQCPKNFDCGHRCKAICHAGPCPNPEQCKKKVKVTCKCRRIKKEFSCESVRKNTAVVECDEACKQKQEEEKKARDSLNEQKKLEEELRNKKELEKYQKMFEGKKKGRARKVYEEEDEAGFITKYRFVLLPVFVSLIALLAYFIFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015498;
- 90% Identity
- iTF_01015498;
- 80% Identity
- -