Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: -
Assembly: GCA_000390285.2
Location: NW:61631-89374[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.35 11 6.4 1.3 1 23 252 274 252 274 0.97

2 21 0.037 1.1 9.5 1.6 1 23 283 305 283 305 0.96

3 21 0.045 1.4 9.2 5.1 1 23 314 336 314 336 0.98

4 21 0.07 2.1 8.7 6.1 1 23 343 365 343 365 0.98

5 21 0.017 0.52 10.6 3.1 1 23 372 394 372 394 0.98

6 21 0.037 1.1 9.5 1.6 1 23 403 425 403 425 0.96

7 21 0.042 1.3 9.4 3.9 1 23 434 456 434 456 0.98

8 21 1 32 5.0 3.3 1 20 463 482 463 484 0.95

9 21 0.044 1.4 9.3 5.1 1 23 492 514 492 514 0.98

10 21 4 1.2e+02 3.1 2.9 1 17 523 539 523 540 0.88

11 21 0.43 13 6.2 1.2 2 21 729 748 729 749 0.94

12 21 0.031 0.96 9.8 7.5 1 23 759 781 759 781 0.98

13 21 0.012 0.35 11.1 1.8 1 23 1039 1061 1039 1061 0.98

14 21 0.11 3.3 8.1 4.6 1 23 1070 1092 1070 1092 0.97

15 21 0.0099 0.3 11.3 0.5 1 23 1148 1170 1148 1170 0.98

16 21 0.1 3.1 8.2 1.2 1 23 1179 1201 1179 1201 0.98

17 21 0.00085 0.026 14.7 3.0 1 23 1210 1232 1210 1232 0.99

18 21 0.012 0.38 11.0 2.2 3 23 1268 1288 1267 1288 0.97

19 21 0.0053 0.16 12.2 1.2 1 23 1297 1319 1297 1319 0.98

20 21 0.0025 0.076 13.2 2.9 1 23 1328 1350 1328 1350 0.98

21 21 0.012 0.37 11.1 1.3 1 21 1359 1379 1359 1380 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.35	11	6.4	1.3	1	23	252	274	252	274	0.97
2	21	0.037	1.1	9.5	1.6	1	23	283	305	283	305	0.96
3	21	0.045	1.4	9.2	5.1	1	23	314	336	314	336	0.98
4	21	0.07	2.1	8.7	6.1	1	23	343	365	343	365	0.98
5	21	0.017	0.52	10.6	3.1	1	23	372	394	372	394	0.98
6	21	0.037	1.1	9.5	1.6	1	23	403	425	403	425	0.96
7	21	0.042	1.3	9.4	3.9	1	23	434	456	434	456	0.98
8	21	1	32	5.0	3.3	1	20	463	482	463	484	0.95
9	21	0.044	1.4	9.3	5.1	1	23	492	514	492	514	0.98
10	21	4	1.2e+02	3.1	2.9	1	17	523	539	523	540	0.88
11	21	0.43	13	6.2	1.2	2	21	729	748	729	749	0.94
12	21	0.031	0.96	9.8	7.5	1	23	759	781	759	781	0.98
13	21	0.012	0.35	11.1	1.8	1	23	1039	1061	1039	1061	0.98
14	21	0.11	3.3	8.1	4.6	1	23	1070	1092	1070	1092	0.97
15	21	0.0099	0.3	11.3	0.5	1	23	1148	1170	1148	1170	0.98
16	21	0.1	3.1	8.2	1.2	1	23	1179	1201	1179	1201	0.98
17	21	0.00085	0.026	14.7	3.0	1	23	1210	1232	1210	1232	0.99
18	21	0.012	0.38	11.0	2.2	3	23	1268	1288	1267	1288	0.97
19	21	0.0053	0.16	12.2	1.2	1	23	1297	1319	1297	1319	0.98
20	21	0.0025	0.076	13.2	2.9	1	23	1328	1350	1328	1350	0.98
21	21	0.012	0.37	11.1	1.3	1	21	1359	1379	1359	1380	0.96

Sequence Information

Coding Sequence: atgttacagctctACATAAGGGAAGTGTACAGGAAGGAAAAGAGAAACGAATCAATTTCAGAtagtcagaaaatatgtcgattgtgtatgaACTTGGTAAAAAGTGAGTTTATGTGCATACGTGAAGAGGAACTCGAAGCTATTCAGAAATTGACTCCTGAAATGaatataaatatcatcatGGATCCCGTTGTATGTAAAGAATGTTTTGATTCCCTGTGTACCCACAACAGTTTCCTTAGAGAATGCTTAGAAGtagaggaaaaaattaaaggggttTGTGATAATTCAGCCACAGAAAGTCGAATAGATACTTCTCCATCTGATTTATTCGTTAAGACTGAAAACCTGGATAAAGAGTTTGATATTAGCGAGATGGAACTGTCGATCAAAACTGAGTGTGTTGACATAAAATCTGAAGATGAGGAAAGAAGtGACGCGCGACTGCAGAGTTCCGATAATGAACCATTCGAGAAGAGTGACTGCAAAGATGCGGAAGAGGATCGATGTAAACATGGGAATGGATCGGAGAACAAATGTAATACAAAAACCAAGCGGGGGTGTAAAGTATTGTataaatgtgataaatgtatttatgaaaCTAGAAACAAGAGTCGTTTTACAGTACATTGTGCGAGACACAAGAACGATTCAGAAGCGTATAAACGTGAATCGTGTGAGTATGACACTAGAAATAAGAGATTTCCTCAAAGGCACCCGTTGAGACATAAGGATCCCTCACATGCCAAAATGTACATGTGTAACGTCTGCGAGTACGAAACTAAATATAGGGAGTATATCAAACAGCACAAAGTGACACATAGAGATCCTttgcaggttcaaatgtacaagtgtaaccgCTGTGATTATGAAAGTAAATACAAGGGTAATATCAGAAAGCACGCAGTGAAACAccaagatccttcgcaggttcaaatgtacaagtgtgacaAATGCAATTATGAAAGTAAATACAAGAGTCATATTAAATCACACCAggtgaaacataaagatccttcgcaaaTGTACAGTTGTAATGACTGTAAATTCAAAACTAAGTACAAGAAGACTATGAAAAGGCACCGACTGAAACATGAAGATCCTTCGcagatgtacaggtgtaaccACTGCGATTATGAAGCCACATATAAGAATAATATTAGACAGCATctactgaaacataaagatccttcacagattcaaatgtacaagtgtaaccgCTGTGATTATGAAAGTAAATACAAGGGTAATATCAGAAAGCATGCAGTGAAACAccaagatccttcgcaggttcaaatgtacaagtgtgacaAATGCAATTATGAAAGTAAATACAAGGCTCATATTAAATCACACCAGCAggaacataaagatccttcgcaaaTGTACAGTTGTAATGACTGCGAATACAAAACTAAGTACAAGAATACTACCAAAAGGCACCGACATGGAGATCCTTcgcagattcaaatgtacaggtgtaaccactgcgattatgaaactacaTACAAGAGTCGTATTAAAtcacaccaactgaaacataaagatccttcagaggttcaaatgtacaggtgtaaccaCTGcagttacaaaactaaatatagCTACAAcatcaaacaTTTTTGTAATGTAGAAGAGTTCGCTTCTGAGCAAGAGTCTAAGAGAATAAGCAAAAACAAGaatataaatatcatcaaagatCCCGTTGTATGTAAGGAATGTTTCGATTCTCTGTGTATCCACAACAGTTTCCTTAGAGAATGCTTAGAAGTAGAGGCAAAAATTAGAGATGTTTGTGATAATTCAGCGACAGAAAGTCGAACAGATACGTCGCCATCTGATTTATTCGTTAAGACTGAAAACCTGGACAAGGAATTTGATATTAGCGAGATGGAACTGTCGATCAAAACTGAATGTGTCGACATAAAATCTGAAGATGAGGAAAGTAGGGATGCGCTACTGCAGAGCTCGGATATTGAACCATTCGAGAATAGTGACTGTAAAGATGCGGAAGAGGATGGATGTAAACATGAGAATGGATCGGAAAGCAAATGCAAAACGAACACCCAGCATGAGTGTAGAGTATTGTATAAATTTGATGAACCTATTTACCAAACTAGAGGTAGGAAATTTTTTCAAAGGCACCTGTGGAGACATAGTGATCCCTTACAGGCCAAAATGCGAAGATGttacgactgcgattacgaaactaaatacaagaatcaTATCAAATGGCACCAACTGAAGCAAAAAGATCTTACGCAGGTTCAAATGCACAAATGTAACCACTGCgattataaaactaaatataagaaTGCCATGAAACAGCACCAACTGACACATAAACATCCTACAGAGaaattgaataatgaGAGCAAAGAGGTTATATGTAACGCTTGCAGAAGAAAATTATATGCAGCATCagaatttaaatcaaattgtctGAATACCCATAACACAATTATTCCATATGTGaatagtgaaaaaatggtaCAACGCGACTTAGGAGAACTCTACATGAGGGAAAAGAGAACCGAATTGATGGATATTTCAGACAAccagaaaatatgtcgattgtgcATGCAGCCAGTAGAAAGTGAGTTTAGGTGCATACGTGAAGAGGAACTTGAAGCTATTCAGAAATTGGCTCCTGAAATGATTGGAAGTATCGTCAAAGATCACATTTTATGTAAGAAGTGCTGTGATTCTCTGTATACCCACAACAGTTTCCTAAAACATTGCATggaaatagaagaaaaaaattgtgataattCAAACCCAGGAAGTTCAAAAGATATATCatcatgttatttatttgttaaaactgAAAACTTGCACAAAGAATTTGATATTAACGAAATGGAATTGGCAATTAAAGAAGAATATGTTGATATAAAATCAGAAGATAGAGAAAAGAGcgaCACGCTGAGCTCTGATATTGGACCATACGATAAGAACGATTGTAAACATGAGGATGGATCAGCAAACGAATGTAATACGAAAGTCAAGCAGGAGCGCAAAGtattgtacaaatgtgataaatgtattTACGAAACTGAATGCGAGACCTGTTTTGCAGCACACCATGCAAGACACAAAAACGGCTTGGAAGTGTATAAATGTGAATCCTGTGAatatgaaactgaaaataaaaaattacttgaaagGCACCAGTTTAGACATAAAGATTCTTCGAAAATGCATTTGCATCGATGCCAGTTCTGTAACTACAAGACAAAGTATAGGTCCGACCTTGTTATGCATCAGGTGAAACACAAAAGTGCCTCCGATGCACGAGTGTACAAGTGCGacttttgttatttcaaaacaaAGTTGAGGACTAGCTTCAATAAACacaaaaaatcaaacaaatgtGATGAGTATTGCCATAAAACCAAAGACAACTCTTCGACAAATAAAGACGCTTCACAACAGCCAATTTATAAATGTGCTAGATGCAACTACGAATCAGTGAATAAGAGACTTTTAATCCAACATCAGTTGGTACATAAAGATCCCTCGCAGGtcaaaatgtacaggtgtaacgactgcaattatgaaactaaatacggGAGCGTTATCAAACGGCACctactgaaacataaagatccttcacagATTGAAATGTACAGATGTAAAGACTGTGactatgaaactaaatacaagagttatATCAAACAACACCTACAGACACATAAGGATCCTTCACAGATTCAAACGTACAACGACTGTGATGATGAAACCAGATACAGTGTCATCCAACGCCAACTGAAACGTGAAGATCCTTCGCGGTTTCGAATgtgtaacgactgcgatttcaAAACTATATACAAGAAGAATGTCAAacgacaccaactgaaacataaagatccttctcagGTTGAGATTTACAGATGTAATGACTGTGaatacgaaactaaatacaaggatGATATCAAagagcaccaactgaaacataatgATCCTTtagaggttcaaatgtacagctGTAATGATTGCGATTTCAAAACTATATACAAGAAGAACGTCAAacgacaccaactgaaacataaagatccttcgcaaattcaaatttacagATGTAATGACTGTGAATACGAAACTAAACACAAGGAAGATATCAAAAAGCACCAAAATGACAGCCTAGAAGTGAAATATAAACCTATTGGAATCATTTATAAGATGATAGCTGGAAATGTTCTTCCGAGAAGGAAAGAAGAAGcagaagaaaaaagaaaacttCAAGGTGACGCGTGGCCAGTTAaggttaaaagttaa
Protein Sequence: MLQLYIREVYRKEKRNESISDSQKICRLCMNLVKSEFMCIREEELEAIQKLTPEMNINIIMDPVVCKECFDSLCTHNSFLRECLEVEEKIKGVCDNSATESRIDTSPSDLFVKTENLDKEFDISEMELSIKTECVDIKSEDEERSDARLQSSDNEPFEKSDCKDAEEDRCKHGNGSENKCNTKTKRGCKVLYKCDKCIYETRNKSRFTVHCARHKNDSEAYKRESCEYDTRNKRFPQRHPLRHKDPSHAKMYMCNVCEYETKYREYIKQHKVTHRDPLQVQMYKCNRCDYESKYKGNIRKHAVKHQDPSQVQMYKCDKCNYESKYKSHIKSHQVKHKDPSQMYSCNDCKFKTKYKKTMKRHRLKHEDPSQMYRCNHCDYEATYKNNIRQHLLKHKDPSQIQMYKCNRCDYESKYKGNIRKHAVKHQDPSQVQMYKCDKCNYESKYKAHIKSHQQEHKDPSQMYSCNDCEYKTKYKNTTKRHRHGDPSQIQMYRCNHCDYETTYKSRIKSHQLKHKDPSEVQMYRCNHCSYKTKYSYNIKHFCNVEEFASEQESKRISKNKNINIIKDPVVCKECFDSLCIHNSFLRECLEVEAKIRDVCDNSATESRTDTSPSDLFVKTENLDKEFDISEMELSIKTECVDIKSEDEESRDALLQSSDIEPFENSDCKDAEEDGCKHENGSESKCKTNTQHECRVLYKFDEPIYQTRGRKFFQRHLWRHSDPLQAKMRRCYDCDYETKYKNHIKWHQLKQKDLTQVQMHKCNHCDYKTKYKNAMKQHQLTHKHPTEKLNNESKEVICNACRRKLYAASEFKSNCLNTHNTIIPYVNSEKMVQRDLGELYMREKRTELMDISDNQKICRLCMQPVESEFRCIREEELEAIQKLAPEMIGSIVKDHILCKKCCDSLYTHNSFLKHCMEIEEKNCDNSNPGSSKDISSCYLFVKTENLHKEFDINEMELAIKEEYVDIKSEDREKSDTLSSDIGPYDKNDCKHEDGSANECNTKVKQERKVLYKCDKCIYETECETCFAAHHARHKNGLEVYKCESCEYETENKKLLERHQFRHKDSSKMHLHRCQFCNYKTKYRSDLVMHQVKHKSASDARVYKCDFCYFKTKLRTSFNKHKKSNKCDEYCHKTKDNSSTNKDASQQPIYKCARCNYESVNKRLLIQHQLVHKDPSQVKMYRCNDCNYETKYGSVIKRHLLKHKDPSQIEMYRCKDCDYETKYKSYIKQHLQTHKDPSQIQTYNDCDDETRYSVIQRQLKREDPSRFRMCNDCDFKTIYKKNVKRHQLKHKDPSQVEIYRCNDCEYETKYKDDIKEHQLKHNDPLEVQMYSCNDCDFKTIYKKNVKRHQLKHKDPSQIQIYRCNDCEYETKHKEDIKKHQNDSLEVKYKPIGIIYKMIAGNVLPRRKEEAEEKRKLQGDAWPVKVKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -