Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: -
Assembly: GCA_000390285.2
Location: NW:760-16697[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0053 0.16 12.2 4.4 1 23 242 264 242 264 0.98

2 13 0.0019 0.059 13.6 1.7 1 23 273 295 273 295 0.98

3 13 0.0014 0.042 14.0 2.2 1 23 304 326 304 326 0.98

4 13 0.029 0.88 9.9 3.6 1 23 335 357 335 357 0.98

5 13 0.0078 0.24 11.7 1.5 1 23 366 388 366 388 0.98

6 13 0.0096 0.3 11.4 1.0 1 23 397 419 397 419 0.99

7 13 1.6 49 4.4 0.6 1 15 428 442 428 445 0.89

8 13 0.00026 0.0079 16.3 3.0 1 23 708 730 708 730 0.99

9 13 0.0056 0.17 12.1 2.5 1 23 739 761 739 761 0.99

10 13 0.0031 0.095 12.9 2.6 1 23 770 792 770 792 0.99

11 13 0.00014 0.0042 17.2 1.9 1 23 801 823 801 823 0.99

12 13 0.013 0.4 10.9 4.2 1 23 832 854 832 854 0.96

13 13 0.0016 0.048 13.9 1.5 1 23 863 885 863 885 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0053	0.16	12.2	4.4	1	23	242	264	242	264	0.98
2	13	0.0019	0.059	13.6	1.7	1	23	273	295	273	295	0.98
3	13	0.0014	0.042	14.0	2.2	1	23	304	326	304	326	0.98
4	13	0.029	0.88	9.9	3.6	1	23	335	357	335	357	0.98
5	13	0.0078	0.24	11.7	1.5	1	23	366	388	366	388	0.98
6	13	0.0096	0.3	11.4	1.0	1	23	397	419	397	419	0.99
7	13	1.6	49	4.4	0.6	1	15	428	442	428	445	0.89
8	13	0.00026	0.0079	16.3	3.0	1	23	708	730	708	730	0.99
9	13	0.0056	0.17	12.1	2.5	1	23	739	761	739	761	0.99
10	13	0.0031	0.095	12.9	2.6	1	23	770	792	770	792	0.99
11	13	0.00014	0.0042	17.2	1.9	1	23	801	823	801	823	0.99
12	13	0.013	0.4	10.9	4.2	1	23	832	854	832	854	0.96
13	13	0.0016	0.048	13.9	1.5	1	23	863	885	863	885	0.98

Sequence Information

Coding Sequence: ATGAGTGATGTTCAAGAACCTTTGTGTAGGCTTTGTATCAAAACTATAACTGATAACAGTTTTGAAATAATAGACATCGCTACTAGAGACATTCTACATGTGCTTTTGTTGAAATTGAAGTGCGACGGGGAGAGCAAAGATGTTATATGTAACACTTGCAGAAAGAAGTTAAATTCAGCATtagaatttaaatcggcatgTCTGAATACCGATAACACAATTATACCATATGTGgactgtaaaaaaatgttagagCTCGATATGAGAGAAATGTACATGAGGGAAAACGGAAAAAAGATAATGAATATTTCGGAcagtcagaaaatatgtcgattgtgtatgcaGCCAGTAAGTAGCGAGTTTAGGTGCATACGTGAAGAGGAACTTGAAGCCATTGAGAAATTGGCTCCTGAAATGATTATAAACATGGTCAAAGATCCCGTTGTTTGTAAGCCATGCTTCGATTCTCTGTGTACTCACAACAATTTTCTGAGAGATTGCTTAGAGGTAGAAGAAAAAATTAGTTCAGCAATGGAAAGTCCAGCAGATACAGCACAATCTGATTTATTCATTAAAACTGAATGTTTGGACAAAGAACTCGATATTAATGAGGCAGAATTGTCGATCAAAGATGAATGTGTTGATATAAAGTCAGAAGTTGAAGAAAAGAGtGACACCTCACCGCAGAGCTCTGATAATGAACCATTCGCGAAGGTCCAGATGTATAGATGTAACGACTGTGATTACAAAACTAAACACAAGAATGCTATCAAACAGCACCAATTGAAGCATAATGATCCTTCACAGGTTAAAATGTATAGGTGTAATGACTGCagttacgaaactaaatacaagagcgATGTGACAAAGCATGAATTGACACATAAAGGTCCTTCGCAGGTTCTAATGTACAGATGTAATGACTGcagttatgaaactaaatacaagggcAACATGAAAAAGCATGAATTgacacataaagatccttcgcaggttcaaatgtacaggtgtaacgttTGCGACTACGAAAGTAGACACAAGTATGTTATCAAAAGGCATCAGCTAAAACACAAAGATCCTTCCCAGATTCAAATGTTCAAGTGTAACGAATGCGATTACGAAGCTAAATACAGGGGTTATATTAAAAgacatcaactgaaacataaagattcctcgcaggttcaaatgtacagatgtaacGACTGCAATTATGAAACAGTATACATGAGAGATATCAATAGGCACCAACTgacacataaagatccttcacaggttcaaatgtacaggtgtaacaacTGTGactacgaaactaaatacaagaagaATATCATACAACTGTGTCTCAATACTGTAAGGGATTCAAATCGCCAGGTGATAGACGAAGTCATCAAAAGGGATGttctaaaaattgttttgccGGGTGTGAATTTGGaggaaaacaaacattttatgtGTACAACGTGTTCCGTAAAATTATTTgctgcttttaattttaaatcaatatgtATGGAAACGGAGGATATAATTTTTCCTCATGTTAACGCCAGTAAAATGCCACTGATTGATTTAAAGGAAGTTTATCTAAAAGAGAAGGGAAATAGTCAGTTAATCGATATATCGGAAGATCATAGAATTTGTCGATTATGTTTTCAGTCGGTAACTTTCGGATTTCTGGCATTAAATGAAGTGGACGTCGACATAATCCATGCATGTATACCACAGCTTAATGTCAGTGCTACCAGGGATCCTGTTATATGTAGAACATGCTTTGATTCGCTTCGTACTCATGgtagttttttaaaaagctgCCTTGAAGTACATGAGACATATACAAACGGAGATgaacaattttacattaaaactgaagaaattgaaataaaactggAAGATGATCAAGACGGcGACACACCACTGCAGACCTACGATAATGAACCATTCGAGAAGAGTGACTGTAAAGATGCAGAAGACGATGCATGTAGAGCTGAGAATAGCGCAACAAACACATGTAACGTGAAAATCAAGCAGGAGCCCAAAGTATCGGATGAATGTATTTACGAAACTGGATGCGAGAGCTGTTTTACGTCACAACGGAAACATAAAAATCTTTCGCAGGCTCAAACGTATAAGTGCAAtgactgcgattatgaaactaaatataagagAGATTTTGAacggcatcaactgaaacacaaagatccttcgcagcttcaaatgtacaagtgtgacaAATGCGATTACGAAACCATATACAGgagttatattaaaaatcatCAACAGAAACATAACGATCCTTCAcaaattcaaatgtacaggtgtaacgactgcgattacaagACTATATACAGGAATGATATTAAAAAGCACCAACAGAAACATAGGGATCCTGCTCATATTCAAACGTATaagtgtaatgactgcgattatgaaactaaatacaaaagtGCTATAAAAAAGCATCAACTGACAcacaaagatccttcacagattCAAATGCACGCATGTAATGACTGCAGCTACAAAACGAAATACaaagataatatcaaaaagcatcaactgaaacacaaAGATCCATCGCACATTGAAATGTATAGGTGTAACGTCTGCGactatgaaactaaatacaagagtgcTATCAAACAGCATcagctgaaacataaagatccctcGCAGAAATTCGATGATGAGAGCAAAGAGGTTATATGTAATGcttgcagaaaaaaattatatgccgCATTCGAATTCAAGTCGAGGTGCCTGAATACCGATAACACAATTATTTCACATGTGGATtgcgaaaaaatgttaaagctcgACATAAGGGAAGTATACAGGAAAGAAAAGGGAAGCAAGTCAATTTCCGATAGTgagaaaatatgtcgattgtgtatgaACTTGGTAAAAAGTGAGATTATGTGCATACGTGAAGGGGAACTCGAAGCCATTCAGAAATTGACTCCTGAAATGaatataaatatcatcGAAGATCCCGTTATATGTCAGGAATGTTTTGATTCCCTGTGCACCCACAACAGTTTCCTTAGAGAATGCTTAGAAGTAGAGGAAAAAATTAGAGGTGCTTATGATAATTCAGCCACAGAAAGTCGAATAGACACGTCACCATCTGATTTATTTGTTACGACTGAAAACCTGGACAAAGACTTGGATATGAGCGAGATggaattttcaatcaaaactgAGTGTGTCGACATAAAATCTGAAGATGAGGAAAGAAGTGATGCGCCACTGCAGACGTCCAATAATGAACCATCGGAGAAGAGTGATTGTAAAGATGCGGAAGAGGATAGATGTAAAAATGAGAATGGATCGGAAAACAAATGTAATAAGAAAGCCAAGCGGGAGTGCAAGGtattgtacaaatgtgataaacCTATTTACCAAACTGGATGCAAGAGTCATTTTACCATGCACTGTGCAAGACACAAGAACAATTCGGAAGGATATAAATGTGAATCCT
Protein Sequence: MSDVQEPLCRLCIKTITDNSFEIIDIATRDILHVLLLKLKCDGESKDVICNTCRKKLNSALEFKSACLNTDNTIIPYVDCKKMLELDMREMYMRENGKKIMNISDSQKICRLCMQPVSSEFRCIREEELEAIEKLAPEMIINMVKDPVVCKPCFDSLCTHNNFLRDCLEVEEKISSAMESPADTAQSDLFIKTECLDKELDINEAELSIKDECVDIKSEVEEKSDTSPQSSDNEPFAKVQMYRCNDCDYKTKHKNAIKQHQLKHNDPSQVKMYRCNDCSYETKYKSDVTKHELTHKGPSQVLMYRCNDCSYETKYKGNMKKHELTHKDPSQVQMYRCNVCDYESRHKYVIKRHQLKHKDPSQIQMFKCNECDYEAKYRGYIKRHQLKHKDSSQVQMYRCNDCNYETVYMRDINRHQLTHKDPSQVQMYRCNNCDYETKYKKNIIQLCLNTVRDSNRQVIDEVIKRDVLKIVLPGVNLEENKHFMCTTCSVKLFAAFNFKSICMETEDIIFPHVNASKMPLIDLKEVYLKEKGNSQLIDISEDHRICRLCFQSVTFGFLALNEVDVDIIHACIPQLNVSATRDPVICRTCFDSLRTHGSFLKSCLEVHETYTNGDEQFYIKTEEIEIKLEDDQDGDTPLQTYDNEPFEKSDCKDAEDDACRAENSATNTCNVKIKQEPKVSDECIYETGCESCFTSQRKHKNLSQAQTYKCNDCDYETKYKRDFERHQLKHKDPSQLQMYKCDKCDYETIYRSYIKNHQQKHNDPSQIQMYRCNDCDYKTIYRNDIKKHQQKHRDPAHIQTYKCNDCDYETKYKSAIKKHQLTHKDPSQIQMHACNDCSYKTKYKDNIKKHQLKHKDPSHIEMYRCNVCDYETKYKSAIKQHQLKHKDPSQKFDDESKEVICNACRKKLYAAFEFKSRCLNTDNTIISHVDCEKMLKLDIREVYRKEKGSKSISDSEKICRLCMNLVKSEIMCIREGELEAIQKLTPEMNINIIEDPVICQECFDSLCTHNSFLRECLEVEEKIRGAYDNSATESRIDTSPSDLFVTTENLDKDLDMSEMEFSIKTECVDIKSEDEERSDAPLQTSNNEPSEKSDCKDAEEDRCKNENGSENKCNKKAKRECKVLYKCDKPIYQTGCKSHFTMHCARHKNNSEGYKCES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -