Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: -
Assembly: GCA_000390285.2
Location: NW:336586-341720[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.011 0.35 11.1 2.9 2 23 350 371 349 371 0.97

2 25 0.015 0.47 10.7 2.7 2 23 381 402 380 402 0.97

3 25 0.00036 0.011 15.9 1.3 1 23 411 433 411 433 0.99

4 25 0.0023 0.069 13.3 1.9 2 23 443 464 442 464 0.97

5 25 0.0064 0.19 11.9 4.0 2 23 474 495 473 495 0.97

6 25 0.044 1.3 9.3 3.9 1 23 503 525 503 525 0.98

7 25 0.006 0.18 12.0 1.5 2 23 535 556 534 556 0.97

8 25 0.036 1.1 9.6 3.2 2 23 566 587 565 587 0.97

9 25 0.017 0.54 10.6 2.0 2 23 597 618 596 618 0.97

10 25 0.59 18 5.7 5.5 1 23 627 649 627 649 0.98

11 25 0.041 1.3 9.4 4.5 2 23 659 680 658 680 0.93

12 25 0.036 1.1 9.6 1.8 2 23 691 712 690 712 0.97

13 25 0.021 0.64 10.3 7.7 1 23 721 743 721 743 0.98

14 25 0.0003 0.0091 16.1 2.6 2 23 753 774 752 774 0.97

15 25 0.97 30 5.1 4.5 2 23 784 805 783 805 0.97

16 25 0.0082 0.25 11.6 1.5 1 23 814 836 814 836 0.98

17 25 1.1 34 4.9 3.4 1 20 843 862 843 864 0.94

18 25 0.041 1.3 9.4 3.0 1 23 880 902 880 902 0.98

19 25 0.046 1.4 9.2 4.0 1 23 911 933 911 933 0.98

20 25 0.1 3.1 8.1 7.2 1 23 942 964 942 964 0.99

21 25 0.037 1.1 9.5 2.5 1 22 973 994 973 994 0.95

22 25 2.6 80 3.7 3.7 1 23 1000 1022 1000 1022 0.96

23 25 0.019 0.6 10.4 6.7 1 23 1030 1052 1030 1052 0.98

24 25 0.17 5.3 7.4 3.8 1 23 1060 1082 1060 1082 0.98

25 25 0.019 0.57 10.5 1.2 2 23 1091 1112 1090 1112 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.011	0.35	11.1	2.9	2	23	350	371	349	371	0.97
2	25	0.015	0.47	10.7	2.7	2	23	381	402	380	402	0.97
3	25	0.00036	0.011	15.9	1.3	1	23	411	433	411	433	0.99
4	25	0.0023	0.069	13.3	1.9	2	23	443	464	442	464	0.97
5	25	0.0064	0.19	11.9	4.0	2	23	474	495	473	495	0.97
6	25	0.044	1.3	9.3	3.9	1	23	503	525	503	525	0.98
7	25	0.006	0.18	12.0	1.5	2	23	535	556	534	556	0.97
8	25	0.036	1.1	9.6	3.2	2	23	566	587	565	587	0.97
9	25	0.017	0.54	10.6	2.0	2	23	597	618	596	618	0.97
10	25	0.59	18	5.7	5.5	1	23	627	649	627	649	0.98
11	25	0.041	1.3	9.4	4.5	2	23	659	680	658	680	0.93
12	25	0.036	1.1	9.6	1.8	2	23	691	712	690	712	0.97
13	25	0.021	0.64	10.3	7.7	1	23	721	743	721	743	0.98
14	25	0.0003	0.0091	16.1	2.6	2	23	753	774	752	774	0.97
15	25	0.97	30	5.1	4.5	2	23	784	805	783	805	0.97
16	25	0.0082	0.25	11.6	1.5	1	23	814	836	814	836	0.98
17	25	1.1	34	4.9	3.4	1	20	843	862	843	864	0.94
18	25	0.041	1.3	9.4	3.0	1	23	880	902	880	902	0.98
19	25	0.046	1.4	9.2	4.0	1	23	911	933	911	933	0.98
20	25	0.1	3.1	8.1	7.2	1	23	942	964	942	964	0.99
21	25	0.037	1.1	9.5	2.5	1	22	973	994	973	994	0.95
22	25	2.6	80	3.7	3.7	1	23	1000	1022	1000	1022	0.96
23	25	0.019	0.6	10.4	6.7	1	23	1030	1052	1030	1052	0.98
24	25	0.17	5.3	7.4	3.8	1	23	1060	1082	1060	1082	0.98
25	25	0.019	0.57	10.5	1.2	2	23	1091	1112	1090	1112	0.96

Sequence Information

Coding Sequence: aTGTGGAAGTTTGAGAAAAGCATATACAAAGAGGAAATATCCTGTAGGCTTTGCCACAGTATCATAAATGATGAGAATTTCGTGGTAATAGAAGAAAGTATCCGACAAATCCTAGATGTCCTTTTACTGAAACTAaaCGGGACAGAAAAAGGCAAATCTGTAGTATGCGATGCCTGTTCAATTAAACTGTATGCGGCATTTAATTTCAAGGCAATTTGTAAGGAGACGGAGGACTGTATTTTTTCCTACACTGATTCTGAAATTGGGGCGCCGGTCGACCTAAGTGAAATTTATGTAAAGGAAAGAGGCAGGGAACATTTCAAAGATATATTGGAAGACGAGAGGATTTGTCGGCTCTGTATGCAGGTGATCACCGATGGGTTTACTTCGATAAAAGATGTAGATGTTGATTCGCTCCACATATACATTCCAGAAGTGAACTTTAATTCCGTCAGAGAACCCGTTGTTTGCAAAGTTTGCCTCGATTCACTGGACACTCACACAagttttttaagatattgtcTAAACATGGAAGAGATCAGACATATTTCATGTGACGAAGCCATAAAAAGTCCTCACCATAATATCAAAGAGGAAATTGAATTCAAACATGAAGATTATATCTCCCCATCAGACGGTGAGCCCGTTGACTACAAAAGTGACTGCAAACCCGAATATGCAAGATCTACAAGTAATTCTATACATTATACCCAAAAAGAACCGATACAAATCGACAATGAAggatttcagttaaaaaatgaaCCCGTTGACTACGAAAGTGACTCCCAATCTGAATATGCGGGATCTACAAGTAATTCTATGGGTGATACCCAAAAGGAACCGACGCAAGTCGAAGGGGAAGACTTCTGGTTAGAAGATAAGGATTTTTCTAAAATGCAGACATATGAATGTGATTCCGATTATGAAAACGAACAATCGAGGTCTCTTGTATGCCACAAAGACATTCCCGAAAAAGATATATTGAATGAGGGCAATCTTGAGCAACACCAAGTAAAACATGAAGACAACCCTGAAGAGGAAATGTTGAAATGTGATTCATGTGATTATACAACGGGTCGAAAGCGCAATCTTGCACACCATCGGCTGAAACACAAACATGACCCCGAGGAGCAGATGTTGAAATGTCCTTCATGCGATTATAGAACCATTTATAAGCATTATCTTGCAAAACATCGACTAAAGCATAAAGTCTTCTCGAAGGAGCAGAAGTATAAATGCGATTCCTGTGATTTTAAAACCGTCAATCAGGGCAATCTTACGCAACATCAATTAAAACATAAAGACATTCCTGAAGCAGAAATATTGAAGTGCGATTTGTGTAATTATAAAACCGGTCAAAAGCGTAATCTTACACAACATCAGCTGAGACACAGATACGTTCCCGAAGAGCAGATGTTGAAATGCGATTTCTGCAATTTTAAAACAACTCAAAAGCAGTATCTCAGGCTACACCAAAGACGGCACGAAGTCAGCAAGGAGCGGAAGTATAAATGTGATTCGTGCGATTACGAAACCATTTATAAGTATTATCTTAAAGAACACCATCTAAAACATAAAGACATCCCCGAAGAAGAAATGTTAAAATGCGATTCGTGTGATTATAAAACCGGTCAAAAGCGCAACCTTGCACGTCACCGGCTGAAACACAAACAAATCCGCGAAGAGCAGATGTTGAAATGTGATTTGTGCAGTTACAAAACCGCTCATAAGCACTATCTTATCGAACATATACTTAGACACAAAGCAGTTATCGAGGAAAAGACACTGAAATGTGATTCCTGCGATTTTACAACCATTTATAGGCGCAATCTTAGGCAACATAAACTAACACACAGCGACATACCCGAAGAGGAAACGTTTAAATGTGACTCGTGCAGTTTTAAAACCATTTATAAGCACTATCTTCGACAACATCAACTGCAACATGAAGACATCCCTGAAGAAGAAAAGTTGAAATGCGATTTCTGCGATTACAAAACCGTTCATAAGCAGCATCTTAAGAAACATGTGGTGCTACACGATGGCACCATTCCCAAAAAGCGGATGCTGAGATGCAACTCGTGTGATTTTAAAACCGTTTATACGAGCAGTCTTACGCAACATCAACTAAAACATAAAGACAACCCTGAACTGGAAACGTTCAAATGTGATTCGTGCGATTATAAAACTGTTCATAAGTACTACCTTAAGAAACATCATAAAATACACAAAACCATCCCCGAAGAGCAGATGTCGAAATGCGACTCATGCAATTATAAAACTATTTCGAAGAGCAATCTTAAAAAACATCAACTGACGCACAAAACCGTCTCCGACGAGCAGATGTTGAAATGCCCCTCGTGCGATTATAGCACCGCTTGTGAGCATTACCTCAAAAAGCATCAATTAAAGCACAAACGCCGCTTCGAGCAGCAGGAGTACAAGTGCGGCTCGTGCGACTATAAAACCATTTCCCAGGCCCGTCTTACCCGGCACCGCCTTAAACACAAAGACACCCCAGAGATATTTAAATGCGATTCCTGCCACTTTAAAACCATTTATAAACGCAGTCTTaggcaacataaaataaaatgtatattgaaTCAGCTAATACACAAAACCACCGCCGAGGGGACGTTCAAATGCGATTCTTGCAATTATAGAACCCGTATAAAGAGCCGTCTTGAACGCCATCGGCTGAGACACAGAGACATCCCCGAGGAGCAGATGTTTAAATGCGATTCGTGCAGTTACAAAACCGTTCACAAGCCGTACCTTACACAACATCAACTAAGGCACAAACTGCGCTCCGAAGACCGGGGGTATAAATGTGACTCGTGCGACTACAAAACCATTTATCACACCTGCCTCAAACGGCACCAGCTCACACACAAAGACATCTCCGCGAAGCAGACGTATAAGTGCGACTTTTGCGATTTTAAATCCGCTTACAAGCAGAACCTTACGCAACACCTGCATACACAAGACGATGAGAAGTTTGAATGCGATTCGTGCGATTTTAAAACCGTTTTCAAACAGTGCTTTTTACGACACCAACTGGGGCACAAGGTCTCCGACAAGCAGGAGTATAAATGCCATTCGTGTGATTTTAAAACCATTTACAAATACAACCTCAAGCAGCACCAGTACAGACACGACGTTCTGCCAGAGGAAGTGTTCAAGTGCGATTCTTGTGCCTTTACaaccatttataaatactaTTTTACACGACATCAGCTTAAACACAAAGGCGTCCTTGAGGGCATGTTAGAATGTGAATCCTGCGATTATAAAACTATGTATAAGGGGAGTCTGAAACGACATCGGTTGAGACATAAGGATGCCCAAAAAGTGGACGGTTAA
Protein Sequence: MWKFEKSIYKEEISCRLCHSIINDENFVVIEESIRQILDVLLLKLNGTEKGKSVVCDACSIKLYAAFNFKAICKETEDCIFSYTDSEIGAPVDLSEIYVKERGREHFKDILEDERICRLCMQVITDGFTSIKDVDVDSLHIYIPEVNFNSVREPVVCKVCLDSLDTHTSFLRYCLNMEEIRHISCDEAIKSPHHNIKEEIEFKHEDYISPSDGEPVDYKSDCKPEYARSTSNSIHYTQKEPIQIDNEGFQLKNEPVDYESDSQSEYAGSTSNSMGDTQKEPTQVEGEDFWLEDKDFSKMQTYECDSDYENEQSRSLVCHKDIPEKDILNEGNLEQHQVKHEDNPEEEMLKCDSCDYTTGRKRNLAHHRLKHKHDPEEQMLKCPSCDYRTIYKHYLAKHRLKHKVFSKEQKYKCDSCDFKTVNQGNLTQHQLKHKDIPEAEILKCDLCNYKTGQKRNLTQHQLRHRYVPEEQMLKCDFCNFKTTQKQYLRLHQRRHEVSKERKYKCDSCDYETIYKYYLKEHHLKHKDIPEEEMLKCDSCDYKTGQKRNLARHRLKHKQIREEQMLKCDLCSYKTAHKHYLIEHILRHKAVIEEKTLKCDSCDFTTIYRRNLRQHKLTHSDIPEEETFKCDSCSFKTIYKHYLRQHQLQHEDIPEEEKLKCDFCDYKTVHKQHLKKHVVLHDGTIPKKRMLRCNSCDFKTVYTSSLTQHQLKHKDNPELETFKCDSCDYKTVHKYYLKKHHKIHKTIPEEQMSKCDSCNYKTISKSNLKKHQLTHKTVSDEQMLKCPSCDYSTACEHYLKKHQLKHKRRFEQQEYKCGSCDYKTISQARLTRHRLKHKDTPEIFKCDSCHFKTIYKRSLRQHKIKCILNQLIHKTTAEGTFKCDSCNYRTRIKSRLERHRLRHRDIPEEQMFKCDSCSYKTVHKPYLTQHQLRHKLRSEDRGYKCDSCDYKTIYHTCLKRHQLTHKDISAKQTYKCDFCDFKSAYKQNLTQHLHTQDDEKFECDSCDFKTVFKQCFLRHQLGHKVSDKQEYKCHSCDFKTIYKYNLKQHQYRHDVLPEEVFKCDSCAFTTIYKYYFTRHQLKHKGVLEGMLECESCDYKTMYKGSLKRHRLRHKDAQKVDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -