Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: -
Assembly: GCA_000390285.2
Location: NW:15505-45497[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 6.2 1.9e+02 2.5 0.1 3 17 50 64 48 65 0.90

2 21 0.0028 0.085 13.1 1.7 1 23 256 278 256 278 0.98

3 21 0.00066 0.02 15.0 3.0 1 23 468 490 468 490 0.99

4 21 0.061 1.9 8.9 2.6 1 23 499 521 499 521 0.95

5 21 0.0014 0.043 14.0 4.0 1 23 530 552 530 552 0.98

6 21 0.01 0.31 11.3 5.0 1 23 561 583 561 583 0.99

7 21 0.23 7.1 7.0 1.8 1 23 592 614 592 614 0.98

8 21 0.0016 0.048 13.8 4.6 1 23 623 645 623 645 0.98

9 21 0.0029 0.089 13.0 2.9 1 23 654 676 654 676 0.99

10 21 0.014 0.41 10.9 4.7 1 23 728 750 728 750 0.98

11 21 0.0095 0.29 11.4 4.3 1 23 759 781 759 781 0.98

12 21 0.082 2.5 8.4 2.2 1 23 1138 1160 1138 1160 0.98

13 21 0.00036 0.011 15.8 1.4 1 23 1169 1191 1169 1191 0.97

14 21 0.0072 0.22 11.8 3.1 1 23 1200 1222 1200 1222 0.98

15 21 0.4 12 6.3 5.0 1 23 1231 1253 1231 1253 0.98

16 21 0.022 0.66 10.3 2.1 1 23 1262 1284 1262 1284 0.98

17 21 0.0097 0.3 11.4 1.1 1 23 1293 1315 1293 1315 0.98

18 21 0.04 1.2 9.4 0.7 1 23 1324 1346 1324 1346 0.98

19 21 0.038 1.2 9.5 1.1 1 23 1355 1377 1355 1377 0.98

20 21 0.021 0.64 10.3 2.0 1 23 1386 1408 1386 1408 0.98

21 21 0.00014 0.0043 17.1 1.8 1 23 1417 1439 1417 1439 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	6.2	1.9e+02	2.5	0.1	3	17	50	64	48	65	0.90
2	21	0.0028	0.085	13.1	1.7	1	23	256	278	256	278	0.98
3	21	0.00066	0.02	15.0	3.0	1	23	468	490	468	490	0.99
4	21	0.061	1.9	8.9	2.6	1	23	499	521	499	521	0.95
5	21	0.0014	0.043	14.0	4.0	1	23	530	552	530	552	0.98
6	21	0.01	0.31	11.3	5.0	1	23	561	583	561	583	0.99
7	21	0.23	7.1	7.0	1.8	1	23	592	614	592	614	0.98
8	21	0.0016	0.048	13.8	4.6	1	23	623	645	623	645	0.98
9	21	0.0029	0.089	13.0	2.9	1	23	654	676	654	676	0.99
10	21	0.014	0.41	10.9	4.7	1	23	728	750	728	750	0.98
11	21	0.0095	0.29	11.4	4.3	1	23	759	781	759	781	0.98
12	21	0.082	2.5	8.4	2.2	1	23	1138	1160	1138	1160	0.98
13	21	0.00036	0.011	15.8	1.4	1	23	1169	1191	1169	1191	0.97
14	21	0.0072	0.22	11.8	3.1	1	23	1200	1222	1200	1222	0.98
15	21	0.4	12	6.3	5.0	1	23	1231	1253	1231	1253	0.98
16	21	0.022	0.66	10.3	2.1	1	23	1262	1284	1262	1284	0.98
17	21	0.0097	0.3	11.4	1.1	1	23	1293	1315	1293	1315	0.98
18	21	0.04	1.2	9.4	0.7	1	23	1324	1346	1324	1346	0.98
19	21	0.038	1.2	9.5	1.1	1	23	1355	1377	1355	1377	0.98
20	21	0.021	0.64	10.3	2.0	1	23	1386	1408	1386	1408	0.98
21	21	0.00014	0.0043	17.1	1.8	1	23	1417	1439	1417	1439	0.98

Sequence Information

Coding Sequence: ATGACTGATGTTAAGGAAACTTCGTGTAGGCTTTGCCTTAAAAAGATAAccgataaaagttttaaaatgataGACACCATTATCAGATACATTctagatgttcttttgctgaaattgaaatttgatagCGAGAGCAAAGAGGTTATATGTAACATTTGCAGAAGAAAGTTAAATACGGCATCAGAATTTAAGTCGGCTTGTCTGAATACCGATAACACAATTATTCCTTATGTGGATagcgaaaaaatgttacagctcgACTTGAGAGAAGTGTACATGCAGGAAAAGAAAAGTGAGTTAGTTGATATTTCTTGCAGTCAAAAtatatgtcgattgtgtatgcaCCCGGTAGAAAGTGAGTTTAGGTGTATATGTGAAGAGGAACTTGAAGCTATTGAGAAATTAGCTCCTGAAATGATTATAAACATCGTCAAAGATCCCATTGTATGTAAGCCGTGTTTTGAATCTTTGTGCACTCATAACAGTTTCCTAAAAGATTGCTTGGAGGtagaggaaaaaattaaaagtatttttgacTGTTCAGCCACAGAATGTCAAATAGATATGTCACCACCTGATTTATTGGTTAAGACTGAAAACTTGGACAAAGAATTCGATATTAGCGAGATGGAAATGTCGATCAAAGCTGAATGTGTCGACATAAAATCGGAAGATGAGGAAGGAAGcgACACACCACTACAGAGCTCCAATTTTGTACCATTCGAGGAGGGTGTCTGTAAAGATGGAGAAGAGGAACAGCCGATTTATAAATGCAAAGTTTGCAACTACACATCAAAGAAAAAGATACTTCTTAGCAGTCATCAGTTGGTACATAAGGATCCCTCACAGaaCAACAGTGCTACCGATGACTCTGTTATATGCGGACCATGTTTTGATTCCCTTCATACTCATGGCAGTTTTTTAAAGAGCTGTCTTGAGGCacaggaaaaatataaaagtgctTACGGGCAGCCTTATATTAAATCTAaggaatttgaaataaaactggAAGATGGTCAGGATGTGCAGGAGACATATAAAATCATTAACAAACAGACTTCTCTTAAATCTGAAAAGATTGAAATAAAACTGGAAAAAGATGGTCAAGATGAACAAAAGGAATGCAAGAATGTTTATATTAAATCCGAAGAGATTGAAATAAAAGTAGAGGAAGGCGGTCAGGACGGGTGCGATTCCTGTTCATGTAACTTAAATAAAGAAACAGTTGAAATTGAAAAGAGACACCTTTCAAAGGACGTGGGAGAAATAAAGAGTGAATGTAAATGTGAAACGGGATTTAATGAAAGCCTTACGACATCCTTGTCGGTTAACAACATCCAAAAACCCAATACCGAAAAGTTTACATTTCAGAATTGTGACCCTTCATCAGATACACAGTTGTACCAATGTGataaatgcaaatataaaacaaaacttaaggCGAGCTTGAAGAGGCATCAGATTACACACAAAGACTTTTCAGAAGTGCCAATTTACTTGTGCGATAAGTGCCCGTTCAGGACAAAGTATAAGTTTCTTCTCAAAACCCACCAATTAAATCATGAAAACCCTTCGGGAATCCTAACGTACAAATGCGATATTTGTacttatgaaactaaatacactAGTCATTTGAAAAGGCATCAGTTGTTGCATATAAACTCTTTGGAAATcgaaatgtacaagtgtgatacatgtgtttataaaactaaatataagaaTCACCTAAAAGTACATCAATTAACGCACAAAGACGCGTcggaaatccaaatgtacacCTGTGGTACGTGTAGTTTTGAAACTAAGTATAAAGTTGTTCTAAACAGGCATCGGTTAAAGCACAAAAGTGTTTCAgaaattcaaatgtacaagtgtgatactTGTACgtatgaaactaaatataagagtCATCTAAAAGTGCATCAGTTATCACACAAGGATTCTTCGgaaattcaaatgtacaagtgtgatgtTTGTCGTTTTGGAACTAAGTTTAGAAGCAATCTGAAGTCACACCAATTGAAACACAAAGAATTTGCACATGTCGAAATGAACAACCATCAACTAATTAAGAACCCTGCCGCAATACAAATGTGGGAAAGTGATACACACGGTGATATTGGTGATAAATGCCATCTTGCATGTCATCTGTCAATACATAAACGTTCAAACATCCAAGTATTCAAGTGTAACGAGTGCGTTTTTGAGACCAAACATAAACAGAACTTAAAGATTCACATGTTCAAACACCAGGATCCGTTGACAGTGCAACTGTACAAGTGTGATAAATGTGTTTTCCAGACAAAGCACAAACGCAATCTCATTAGACACCAGTCAGTACACAAAAATCTTTTGGGACTTTTGTGGTTACGGGAATTATTTGTAGGTTATGGTTACGcagaaaatttgttttgtctTGATTGCTTTGTAGAGAAAATGCAACcagtaaacattaaaaaaatgtgcagaCTGTGTCTAAATATAATAAACTATACAAATTGCGAAGTAATAGGAGAAATGATAAGAGAGGTTCTAGAAGTTGTTTTGCCGAATCTAaacTTGGAGGAGCGAGATAGACATGTAATGTGTATAGCATGTTCCATAAAATTGTCCgccgtttttaattttaagtcgaCATGTATGGATACTGAAGATATTATTTCTTCATATGTTAATTCCGGTGCAGTATCAGTGGTTGATTTAAAAGAGGTTTATCTAAAAGAAAAAGGCAATATTCAGTTAACTGATATATCGGAAAATCAGAAAATTTGTCGTTTATGTATTCAGTTGTTAACATGTGGATTTGTGTCACTAAATGAAGTGGGCGGTGACATAATTGATGAGTTTATGCCACAACTCaaaataaatgcTACTAGGGACCCTGTTGTATGTCAATCATGCTTTGATTCACTTCGTACTCATGGTAGTTTTATAAAGAACTGCCTTGATGCacaggaaaaatataaaaatatcgatAAACAGTCTCATATTAAAACTGAAGAGATTGAAGTAAAACTGGAACCGGAATATTTCCCAGACCATCGTCGAGATGTGCAGGAGATATATAAAAGTGCCGATAAAGAGTCTgaagatacaaaaataaaactggaAGATGGTCAATATACGCATGAGAAATATGAAAGTGGTGATAAGCAGTCTCctattaaatttgaagaaattgaaataaaagtaGAAGACGATCAGGATGGtaattcACCTTTATACGACTTAGATGATGAAACAATTGCAAATGGAAAAGATGTGGGAGAAATAAAGAGTGAACATATGTATGAATGCGAGGCAGGATTTAATGAAAACTGTAGGGTGTCGATGCAGGTTCGCAATATCCAAACATGCAATAGCAAAAAGTCCAAATTTCAAAAGTGTGAACCTTCATTAGACATGCAATTCCACCAATGTGACAAATGCAAATATGAAACTAAGATTGAAACGGACCTGAAAACACATCAGTTGATACACGAAGAACCTTCaaaaatccaaatgtacaagtgtgatatgtgtaattttgaaactaaacgtAAGAGTAATCTGAAAGGGCATCAGTTAGCACACAAGGATTCTTCAGAAATCCAcatgtacaagtgtgatacttgcgcttatgaaactaaatataagagtCATCTAAAAGTGCATCAGATACAGCACAAAGACCTCTTGGAAGTTCGAATGTACAAGTGCGATACTTGTGgttttgaaactaaatataaaaattgtataaaaagcCATCAGTTGAAGCACAAAGACTCTTCAGAAATCGAAATGTACACGTGCGATACGTGTgcttacaaaactaaatacaagagtgtTCTAAACAGGCATCGGTTAATGCACAAAGACCCCTcggaaatccaaatgtacacTTGTGATACCTGCCcctatgaaactaaatataagagtATTTTAAACAGGCATCAACTAATGCACAAAAATGTTAcagaaatccaaatgtacaaatgcGATGCCTGCCcctatgaaactaaatataagagtATTTTAAACAGGCATCAACTAATGCACAAAAATGTTAcagaaatccaaatgtacaaatgcGATGCCTGCCCGTATGAAACTAAACAGATGAGATATCTAAAAGATCATCAGTTAAAGCACAAAGATCCCTCGGAAgtccaaatgtacaagtgtgatgcCTGTAGTTTTGAAACTAAACGTAAAAGACTTCTAAAGTCACATCAGTTAATGCACAAAGATCTTTCTGAAATCCacatgtacaaatgtgatattTGTACCTACAGAACTAAATATAAAAGTGGTCTAAATAAGCATCAGCTAATACACAAAGACACTTCGGAAATTGTAGGAGTGTGA
Protein Sequence: MTDVKETSCRLCLKKITDKSFKMIDTIIRYILDVLLLKLKFDSESKEVICNICRRKLNTASEFKSACLNTDNTIIPYVDSEKMLQLDLREVYMQEKKSELVDISCSQNICRLCMHPVESEFRCICEEELEAIEKLAPEMIINIVKDPIVCKPCFESLCTHNSFLKDCLEVEEKIKSIFDCSATECQIDMSPPDLLVKTENLDKEFDISEMEMSIKAECVDIKSEDEEGSDTPLQSSNFVPFEEGVCKDGEEEQPIYKCKVCNYTSKKKILLSSHQLVHKDPSQNNSATDDSVICGPCFDSLHTHGSFLKSCLEAQEKYKSAYGQPYIKSKEFEIKLEDGQDVQETYKIINKQTSLKSEKIEIKLEKDGQDEQKECKNVYIKSEEIEIKVEEGGQDGCDSCSCNLNKETVEIEKRHLSKDVGEIKSECKCETGFNESLTTSLSVNNIQKPNTEKFTFQNCDPSSDTQLYQCDKCKYKTKLKASLKRHQITHKDFSEVPIYLCDKCPFRTKYKFLLKTHQLNHENPSGILTYKCDICTYETKYTSHLKRHQLLHINSLEIEMYKCDTCVYKTKYKNHLKVHQLTHKDASEIQMYTCGTCSFETKYKVVLNRHRLKHKSVSEIQMYKCDTCTYETKYKSHLKVHQLSHKDSSEIQMYKCDVCRFGTKFRSNLKSHQLKHKEFAHVEMNNHQLIKNPAAIQMWESDTHGDIGDKCHLACHLSIHKRSNIQVFKCNECVFETKHKQNLKIHMFKHQDPLTVQLYKCDKCVFQTKHKRNLIRHQSVHKNLLGLLWLRELFVGYGYAENLFCLDCFVEKMQPVNIKKMCRLCLNIINYTNCEVIGEMIREVLEVVLPNLNLEERDRHVMCIACSIKLSAVFNFKSTCMDTEDIISSYVNSGAVSVVDLKEVYLKEKGNIQLTDISENQKICRLCIQLLTCGFVSLNEVGGDIIDEFMPQLKINATRDPVVCQSCFDSLRTHGSFIKNCLDAQEKYKNIDKQSHIKTEEIEVKLEPEYFPDHRRDVQEIYKSADKESEDTKIKLEDGQYTHEKYESGDKQSPIKFEEIEIKVEDDQDGNSPLYDLDDETIANGKDVGEIKSEHMYECEAGFNENCRVSMQVRNIQTCNSKKSKFQKCEPSLDMQFHQCDKCKYETKIETDLKTHQLIHEEPSKIQMYKCDMCNFETKRKSNLKGHQLAHKDSSEIHMYKCDTCAYETKYKSHLKVHQIQHKDLLEVRMYKCDTCGFETKYKNCIKSHQLKHKDSSEIEMYTCDTCAYKTKYKSVLNRHRLMHKDPSEIQMYTCDTCPYETKYKSILNRHQLMHKNVTEIQMYKCDACPYETKYKSILNRHQLMHKNVTEIQMYKCDACPYETKQMRYLKDHQLKHKDPSEVQMYKCDACSFETKRKRLLKSHQLMHKDLSEIHMYKCDICTYRTKYKSGLNKHQLIHKDTSEIVGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -