Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: -
Assembly: GCA_000390285.2
Location: NW:94159-209863[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 37 0.00089 0.027 14.6 1.1 2 23 261 282 260 282 0.93

2 37 0.00019 0.0059 16.7 1.8 1 23 288 310 288 310 0.98

3 37 0.00046 0.014 15.5 1.5 1 23 316 338 316 338 0.98

4 37 0.0022 0.069 13.4 0.3 2 23 345 367 345 367 0.95

5 37 0.00052 0.016 15.4 2.3 1 23 372 394 372 394 0.96

6 37 0.087 2.7 8.4 3.5 2 23 405 427 404 427 0.94

7 37 0.00011 0.0033 17.5 0.8 1 23 434 456 434 456 0.98

8 37 1.2e-05 0.00037 20.5 2.8 2 23 463 484 462 484 0.98

9 37 4.4e-07 1.4e-05 25.0 3.1 1 23 490 512 490 512 0.98

10 37 0.00064 0.02 15.1 0.7 1 23 518 540 518 540 0.98

11 37 9.2 2.8e+02 2.0 0.1 1 23 586 608 586 608 0.91

12 37 1.9 59 4.1 5.5 1 20 614 633 614 636 0.94

13 37 2.6 81 3.7 1.3 1 23 643 665 643 665 0.87

14 37 0.023 0.69 10.2 4.6 1 23 671 694 671 694 0.97

15 37 0.0027 0.083 13.1 1.8 1 23 704 727 704 727 0.96

16 37 0.0075 0.23 11.7 0.7 3 23 737 757 736 757 0.98

17 37 0.00022 0.0068 16.5 2.8 1 23 763 785 763 785 0.96

18 37 3.5e-05 0.0011 19.0 0.3 1 23 791 813 791 813 0.98

19 37 0.25 7.6 6.9 0.5 1 14 819 832 819 836 0.89

20 37 8.1 2.5e+02 2.2 0.7 2 23 944 965 943 965 0.91

21 37 0.23 7.2 7.0 2.4 1 23 971 993 971 993 0.98

22 37 0.0038 0.12 12.6 1.4 1 23 999 1021 999 1021 0.91

23 37 0.00028 0.0085 16.2 3.6 1 23 1027 1050 1027 1050 0.98

24 37 0.0012 0.038 14.2 3.3 1 23 1062 1085 1062 1085 0.93

25 37 0.012 0.37 11.0 1.3 3 23 1096 1116 1095 1116 0.98

26 37 2.1e-06 6.3e-05 22.9 1.2 1 23 1122 1144 1122 1144 0.98

27 37 1.8e-06 5.4e-05 23.1 0.8 1 23 1150 1172 1150 1172 0.98

28 37 0.0066 0.2 11.9 0.0 1 22 1178 1199 1178 1199 0.96

29 37 2.8 86 3.6 0.2 2 23 1282 1303 1281 1303 0.94

30 37 0.74 23 5.4 3.0 1 23 1309 1331 1309 1331 0.97

31 37 0.01 0.32 11.2 2.3 1 23 1337 1359 1337 1359 0.91

32 37 0.0005 0.015 15.4 3.6 1 23 1365 1388 1365 1388 0.98

33 37 0.0005 0.015 15.4 3.5 1 23 1400 1423 1400 1423 0.94

34 37 0.037 1.1 9.5 0.9 3 23 1434 1454 1433 1454 0.98

35 37 1.6e-05 0.00051 20.1 2.2 1 23 1460 1482 1460 1482 0.97

36 37 2.7e-06 8.4e-05 22.5 0.7 1 23 1488 1510 1488 1510 0.98

37 37 0.026 0.81 10.0 2.9 1 21 1516 1536 1516 1541 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	37	0.00089	0.027	14.6	1.1	2	23	261	282	260	282	0.93
2	37	0.00019	0.0059	16.7	1.8	1	23	288	310	288	310	0.98
3	37	0.00046	0.014	15.5	1.5	1	23	316	338	316	338	0.98
4	37	0.0022	0.069	13.4	0.3	2	23	345	367	345	367	0.95
5	37	0.00052	0.016	15.4	2.3	1	23	372	394	372	394	0.96
6	37	0.087	2.7	8.4	3.5	2	23	405	427	404	427	0.94
7	37	0.00011	0.0033	17.5	0.8	1	23	434	456	434	456	0.98
8	37	1.2e-05	0.00037	20.5	2.8	2	23	463	484	462	484	0.98
9	37	4.4e-07	1.4e-05	25.0	3.1	1	23	490	512	490	512	0.98
10	37	0.00064	0.02	15.1	0.7	1	23	518	540	518	540	0.98
11	37	9.2	2.8e+02	2.0	0.1	1	23	586	608	586	608	0.91
12	37	1.9	59	4.1	5.5	1	20	614	633	614	636	0.94
13	37	2.6	81	3.7	1.3	1	23	643	665	643	665	0.87
14	37	0.023	0.69	10.2	4.6	1	23	671	694	671	694	0.97
15	37	0.0027	0.083	13.1	1.8	1	23	704	727	704	727	0.96
16	37	0.0075	0.23	11.7	0.7	3	23	737	757	736	757	0.98
17	37	0.00022	0.0068	16.5	2.8	1	23	763	785	763	785	0.96
18	37	3.5e-05	0.0011	19.0	0.3	1	23	791	813	791	813	0.98
19	37	0.25	7.6	6.9	0.5	1	14	819	832	819	836	0.89
20	37	8.1	2.5e+02	2.2	0.7	2	23	944	965	943	965	0.91
21	37	0.23	7.2	7.0	2.4	1	23	971	993	971	993	0.98
22	37	0.0038	0.12	12.6	1.4	1	23	999	1021	999	1021	0.91
23	37	0.00028	0.0085	16.2	3.6	1	23	1027	1050	1027	1050	0.98
24	37	0.0012	0.038	14.2	3.3	1	23	1062	1085	1062	1085	0.93
25	37	0.012	0.37	11.0	1.3	3	23	1096	1116	1095	1116	0.98
26	37	2.1e-06	6.3e-05	22.9	1.2	1	23	1122	1144	1122	1144	0.98
27	37	1.8e-06	5.4e-05	23.1	0.8	1	23	1150	1172	1150	1172	0.98
28	37	0.0066	0.2	11.9	0.0	1	22	1178	1199	1178	1199	0.96
29	37	2.8	86	3.6	0.2	2	23	1282	1303	1281	1303	0.94
30	37	0.74	23	5.4	3.0	1	23	1309	1331	1309	1331	0.97
31	37	0.01	0.32	11.2	2.3	1	23	1337	1359	1337	1359	0.91
32	37	0.0005	0.015	15.4	3.6	1	23	1365	1388	1365	1388	0.98
33	37	0.0005	0.015	15.4	3.5	1	23	1400	1423	1400	1423	0.94
34	37	0.037	1.1	9.5	0.9	3	23	1434	1454	1433	1454	0.98
35	37	1.6e-05	0.00051	20.1	2.2	1	23	1460	1482	1460	1482	0.97
36	37	2.7e-06	8.4e-05	22.5	0.7	1	23	1488	1510	1488	1510	0.98
37	37	0.026	0.81	10.0	2.9	1	21	1516	1536	1516	1541	0.95

Sequence Information

Coding Sequence: ATGGATAACGGTGGTGATATTTTACGATTATGCAGACTGTGTTTAGTTAAGGACGATGTTAATATTCCAATTTTTGAGGAACAAGGTGATATTAGGCAAATATTTCTGAAGATTAGTTCGTGTCTACCGGTTAAGGTGTCACGAGAAGACAAATTGcccaaaaaaatatgtgatgGATGTTCCTATAAGTTAGATATGTTATATGAATTTTGGAATACGACCGCCAACGCGGAGAAGCAACTGTTATCATGGTTGGGGGAGGCTGGCATGAACGCCAAGATGGCAGATGGCACGATATCTGCGGTGGCACAACAAATCAAACCTGTAGAGACTTTTGTAAAGCAAGAGGCGATAGATCCCTCGGATATACACACGGAGGACGATGACGACAAAAGTTACATGTTCCAGCAGAAGTTCGCCGTCGAAGAGGCGGGTCCTTCTGCCACTGTTACCTCGAATGAGGAGGAGCCTCCCCCCAAGAGGGCGCGACGGACGGCCGCCGTCAAAGCCCAGATTGCAATGGACCCCGAAAGCGATGACGACGACGATTCAGGGGAGCCGATGACAAAGGTCGAGGACGAAAGTGAAGAGAGTGAAGGCGATGATCACGAGCCTCCATTCGTCGACGTACCCTCGACCAGCGCTGACGATCAGCCTGGTCCTTCGGGCGTGGGAAAAGACGGCGTCGAAGCACCGTCGAAGAAGAAAAAGAGGAGAGCAAAATCCACGATAAAATACAACAGTGTCAAACACGAAGGGAAGACGTCCAAACCGTTAAAAGTCTGCACCGTCTGCGGGAAGACCTTCACGGACATAAGACGACTGAAAAGACACTTTGTCTCCCACAGTGACGAGCGACCCTTCTCCTGCAACCTGTGCACCAGGAAATTTAAGATGAAATTCCAACTAGTAGCGCACCTGCGCGTGCACGACGAGAACATGTCCTTCGAGTGCGACTTTTGTTCGAAAAAGCTACGATCCAAGGGCTCTTTGATCGTTCACCGGCGAAGACACATGAAAGAGTACGTGGCCAAGTGCGAGGTCTGCGGACAGGGCTTCGTCACCAACCAGGAGTACAGCAACCACATGGGCTCCAAGCACGGCATCAGCAAGCACATCTGCGACTTCTGCGGACGGGGTTGCTACGACAAGTCCGCCCTCCAGAGTCACATGGCCCGCCACGCGGAAGACTACGAAACCAATAAGAACATACGGTGCAAGCTGTGCGACAAGACTTTCCTCCAGGAAAGGTACCTGAAGCACCACTTCCTGCGGATGCACAAGAACGGGGGACAGAGGTTCGTGTGCGATCACTGCGGCAAAGAGGTGAACTCCAAGAGGAGCCTGCGCGATCACCTGCTGATCCACCAAGGGCTCAAGCCTATTCAGTGCAAGGAGTGCGGTAGGTGTTTCGCCTTGAGAACCACCCTGAAACTTCATATGAGGACACACACGGGGGACAGGCCGTACGAATGTAGTCAGTGCGGCAAGTGCTTCACGCAGAAGTCACCGCTCACGGTACACATGAGGTATCACACGGGGGAGAGGCCTTACGTATGCAGCGTGTGTCATAACGGGTTCGTCAGCAAGGGGGCGCTGTCTATACACCAGAAGAAACATAGATCGgtGTCGAAGAAGCGCAACAGAAGAAAGCTTGACAAATTACTTGACCCCGACTACGTCGCCCCCAAGATCAAAAGACCCACCAACGACTTCGACTTCTCCGAAGACACCTCGGACAACAACTTCCTGAAATTCGCCTGCGAGCTGTGCGACGAAAAGATCCAGTCGAGCGTAGCTTTCGCCCTACATTCCATCAGGCACTCCTCCACCAAGAAGTACCACTGCCACTACTGCAAGTACAAGACCAGCACCGTCAAGCGCATGCGCCGGCACATGTGGATCCACGGCAACGGCGGCAAGGTCTTCCAGTGCGAGACCTGCTCCACCGTCTTCCCCGAGTGCATCCAGGCCATCGAACACAAGAACTTCCACTCGGGCGAGATGCCTTACAAGTGCGACACCTGCGAGAAGCACTTCATGTTCTCCTGGCTGCTATTCACCCACCGCCGCCTCTTCCATTGGGACTCCAAGGGCGACACGGGGCCCTTCACCTGCGACACCTGCAACGGCAAATTCGGGACGCGGTCCGGATTGCGCAAACACATCTTCAGGAAGCACAACAGCGTGCCCAAAGAGCCAACCCTCTGCGACATTTGCGGGAAGAGCCTGGCCAACAACGAGACGCTCAAGTTCCACAAGAGGACCCACACGGGGTACAAGCCGCACATCTGCAGCACGTGCGGGAAGAGCTTCTGCAAGAAGGGGCTGCTGGTGGAGCACGAGAGGGTTCACACGGGGGAGAGGCCCTTCATCTGTCAGTACTGCGAGAAGGGGTTCTCCCAGAGGGCGCCGCTGAAGATTCACTTGAGGATCCATACGGGGGAGAGGCCATACGTGTGTAAATTTTGCGGGAAGGGGTTCTTCGACTCGTCGATACTAAACAATCTAATATACGGCCCAGGAATCTCCATAACGCCTGTCAAGCAAGAAATCTACGACTACACTGCCAACGGCCCCGACAAGTTCAATCCGTTCAACGGATTCAACGGCTACAACCCATTCATGAGTCAGTTCATCGAGAACGAGATAAAGCTCAACGCGAAAATGAGCTCCCCCAAACCGGAAAAGGAAATATCCAAGCCCGCAGCTACCGGTAACATAATAGACTGTTTGAACAAGACTAACAAGCTCAAGAAGAAGCCCGAGAAACCAAAGAGTACTTCGGATAGGAACGCGCCGCAACCCCCCACCCTAGACGAACCCATTCATTGCGAAACTTGCAACGACACGTACAAGAACAACGTCGCTTTCGCCTTACACTCGATTCAGCACACCCAGGATGATAAATACGAATGTCATCTGTGCGACTATCGGAACGCTTCCAAGTACCACATCGAAATGCACATAAGGGCCCACGAAGGCACCACCAAGTACAAGTGCGAGGTATGCGGCAAGGCCTTCACCGTGAGCACCCACGCCATAGAGCACAAGTACTTCCACACCGGCGAAAAACCTTTCCAGTGCGAGATATGCGGCAAGCACTTCATGTTCTCCTGGTTCCTCACATCGCACCGCAGAACCCAACACTGGGAGATAATGACCGGCAGCCCCCTGGTGAAATACGACTGCACCATCTGCAACAAGCACTACACCTCCTCCACGGGTCTGAAGAGGCACAACCTTAGCAAGCACAACTCCTCGGGCATCGACCCGTCAGTGCTCTGCGACATCTGCGGCAAGAGGCTGTCGAGTAAGGAAAAACTGAAATTCCACCGGAGGATCCACACGGGGTACAAGCCGTTCTCGTGCGAGGTATGCACCAAGAGCTTCTCCAGGAAGGAGCAGCTGAAGGAGCACGAGAGGGTGCACACGGGGGAAAAGCCCTTCATCTGCAAGTACTGCGGCAAAGGCTTCACCCAGAGGTCCCCGCTCAGGATACACGAAAGAACGCATACGGGGGAGCGGCCTTATGTGTGTATGATCTGCGGCAAGGGGTTCATATCGAAGGGGGTGATGGACACGCATATGAAGACCTGTTCTGCGGCGCAAATGCACTATAATTATACAGAACACCGGAAGAAAGCACTAGATGGTGTTAACAGTTCGGGTGTGGATGTCCGGTTCATCACAAAGTTGAGTCCTGTTTGGGAACCGGACGACGAGAAGCCCAAGAAAAAGAGCAAGACGCGCAAAGTCCGGAGAGAGAAGAAAGAGAAGAAGGTTCGGAGAAAAAAGATCGACATCGTCCACCCGCCGCCCATCGAGCTGGACGAACCTATCCAGTGCGACGTGTGCAGCGACACCTACAAGAATAACGTCGCGTTCTCTCTACATTCCATCAGCCACAGCGATGACGGCAAATACTCTTGTCACATATGCAACTATCGGAACGCCTCCAAGTACCACATAGAGATGCATGTGAGGGCTCACGAAGGCACCACGAGTTACAAGTGCGAGATCTGCAACAAGGCCTTCACCGTGAGCACCCACGCCATGGAACACAAGTACTTCCATTCCGGGGAAAAGCCCTTCCAATGCGAGATATGCGGGAAACACTTCATGTTCTCCAGATTCCTCGCCTCCCACCGCAGGACCCAGCACTGGGAGATCATCACCGGCACGCCCTTGATCAAGTACGATTGCACCATCTGTAAAAAGCACTACACCTCCTCCAGCGGCCTGAAGAGGCACAACCTCAGGAACCACAACACGGAAGGCATAGACACCTCGGTGCTCTGCGACATATGTGGGAAGAAAATATCCAGCAACGAGAAGCTTAAATTTCACCGAAGGGTGCACACGGGATACAAACCGTTCGCTTGCGAGGTCTGCGGCAAGTGTTTCTCCACGAAGGAACAGAAGAAGGAGCACCTCAGAGTCCACACCGGCGAAAAACCCTACATTTGCAAGTACTGCGGCAAGGGTTTCACCCAGAGGTCTCCCTTGAAGATACACGAGAGGTCCCACACGGGGGAGATGCCCTACGTGTGCTTGATTTGTTCCAAAGGGTTCATCTCGAAAAGTGCCATGGATACCCACATGAAGCACTGCACCTTTCACATACCTTGTTAG
Protein Sequence: MDNGGDILRLCRLCLVKDDVNIPIFEEQGDIRQIFLKISSCLPVKVSREDKLPKKICDGCSYKLDMLYEFWNTTANAEKQLLSWLGEAGMNAKMADGTISAVAQQIKPVETFVKQEAIDPSDIHTEDDDDKSYMFQQKFAVEEAGPSATVTSNEEEPPPKRARRTAAVKAQIAMDPESDDDDDSGEPMTKVEDESEESEGDDHEPPFVDVPSTSADDQPGPSGVGKDGVEAPSKKKKRRAKSTIKYNSVKHEGKTSKPLKVCTVCGKTFTDIRRLKRHFVSHSDERPFSCNLCTRKFKMKFQLVAHLRVHDENMSFECDFCSKKLRSKGSLIVHRRRHMKEYVAKCEVCGQGFVTNQEYSNHMGSKHGISKHICDFCGRGCYDKSALQSHMARHAEDYETNKNIRCKLCDKTFLQERYLKHHFLRMHKNGGQRFVCDHCGKEVNSKRSLRDHLLIHQGLKPIQCKECGRCFALRTTLKLHMRTHTGDRPYECSQCGKCFTQKSPLTVHMRYHTGERPYVCSVCHNGFVSKGALSIHQKKHRSVSKKRNRRKLDKLLDPDYVAPKIKRPTNDFDFSEDTSDNNFLKFACELCDEKIQSSVAFALHSIRHSSTKKYHCHYCKYKTSTVKRMRRHMWIHGNGGKVFQCETCSTVFPECIQAIEHKNFHSGEMPYKCDTCEKHFMFSWLLFTHRRLFHWDSKGDTGPFTCDTCNGKFGTRSGLRKHIFRKHNSVPKEPTLCDICGKSLANNETLKFHKRTHTGYKPHICSTCGKSFCKKGLLVEHERVHTGERPFICQYCEKGFSQRAPLKIHLRIHTGERPYVCKFCGKGFFDSSILNNLIYGPGISITPVKQEIYDYTANGPDKFNPFNGFNGYNPFMSQFIENEIKLNAKMSSPKPEKEISKPAATGNIIDCLNKTNKLKKKPEKPKSTSDRNAPQPPTLDEPIHCETCNDTYKNNVAFALHSIQHTQDDKYECHLCDYRNASKYHIEMHIRAHEGTTKYKCEVCGKAFTVSTHAIEHKYFHTGEKPFQCEICGKHFMFSWFLTSHRRTQHWEIMTGSPLVKYDCTICNKHYTSSTGLKRHNLSKHNSSGIDPSVLCDICGKRLSSKEKLKFHRRIHTGYKPFSCEVCTKSFSRKEQLKEHERVHTGEKPFICKYCGKGFTQRSPLRIHERTHTGERPYVCMICGKGFISKGVMDTHMKTCSAAQMHYNYTEHRKKALDGVNSSGVDVRFITKLSPVWEPDDEKPKKKSKTRKVRREKKEKKVRRKKIDIVHPPPIELDEPIQCDVCSDTYKNNVAFSLHSISHSDDGKYSCHICNYRNASKYHIEMHVRAHEGTTSYKCEICNKAFTVSTHAMEHKYFHSGEKPFQCEICGKHFMFSRFLASHRRTQHWEIITGTPLIKYDCTICKKHYTSSSGLKRHNLRNHNTEGIDTSVLCDICGKKISSNEKLKFHRRVHTGYKPFACEVCGKCFSTKEQKKEHLRVHTGEKPYICKYCGKGFTQRSPLKIHERSHTGEMPYVCLICSKGFISKSAMDTHMKHCTFHIPC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -