Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: -
Assembly: GCA_000390285.2
Location: NW:26905-38264[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.23 7.2 7.0 1.8 2 23 155 176 154 176 0.96

2 31 2.6e-05 0.0008 19.4 4.1 1 23 181 203 181 203 0.98

3 31 0.0027 0.083 13.1 4.1 1 23 209 231 209 231 0.97

4 31 0.0048 0.15 12.3 1.3 1 19 237 255 237 256 0.96

5 31 5.1e-05 0.0016 18.5 0.2 1 23 265 287 265 287 0.97

6 31 0.0034 0.1 12.8 0.2 1 23 488 511 488 511 0.97

7 31 9.5e-05 0.0029 17.7 5.7 1 23 517 539 517 539 0.97

8 31 2.8e-05 0.00086 19.3 7.2 1 23 545 567 545 567 0.98

9 31 1.5e-05 0.00046 20.2 0.4 1 23 573 596 573 596 0.96

10 31 0.0041 0.13 12.5 1.4 1 23 608 630 608 630 0.93

11 31 0.00067 0.021 15.0 4.3 1 23 636 658 636 658 0.98

12 31 6.8e-06 0.00021 21.3 0.5 1 23 665 687 665 687 0.96

13 31 8.7e-06 0.00027 20.9 1.2 1 23 693 715 693 715 0.98

14 31 1.3e-06 4e-05 23.6 0.9 3 23 723 743 721 743 0.96

15 31 1.9e-05 0.00059 19.9 0.1 1 23 749 771 749 771 0.99

16 31 6.1 1.9e+02 2.5 0.6 1 23 776 799 776 799 0.93

17 31 0.00087 0.027 14.6 0.7 2 23 1046 1067 1045 1067 0.97

18 31 0.00015 0.0045 17.1 3.5 1 23 1072 1094 1072 1094 0.97

19 31 0.0012 0.037 14.2 3.4 1 23 1100 1122 1100 1122 0.97

20 31 0.0056 0.17 12.1 2.7 1 19 1128 1146 1128 1147 0.96

21 31 2e-05 0.00061 19.8 0.4 1 23 1156 1178 1156 1178 0.98

22 31 0.0099 0.3 11.3 0.1 1 23 1374 1397 1374 1397 0.97

23 31 1.5e-05 0.00047 20.2 2.9 1 23 1403 1425 1403 1425 0.98

24 31 4e-05 0.0012 18.9 4.6 1 23 1431 1453 1431 1453 0.98

25 31 2.4e-05 0.00074 19.6 3.7 1 23 1459 1482 1459 1482 0.95

26 31 0.079 2.4 8.5 0.4 1 23 1494 1516 1494 1516 0.92

27 31 0.045 1.4 9.3 6.0 1 23 1522 1544 1522 1544 0.97

28 31 6.8e-06 0.00021 21.3 0.5 1 23 1551 1573 1551 1573 0.96

29 31 8.7e-06 0.00027 20.9 1.2 1 23 1579 1601 1579 1601 0.98

30 31 2.3e-06 7e-05 22.8 0.8 3 23 1609 1629 1607 1629 0.96

31 31 1.9e-05 0.00059 19.9 0.1 1 23 1635 1657 1635 1657 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.23	7.2	7.0	1.8	2	23	155	176	154	176	0.96
2	31	2.6e-05	0.0008	19.4	4.1	1	23	181	203	181	203	0.98
3	31	0.0027	0.083	13.1	4.1	1	23	209	231	209	231	0.97
4	31	0.0048	0.15	12.3	1.3	1	19	237	255	237	256	0.96
5	31	5.1e-05	0.0016	18.5	0.2	1	23	265	287	265	287	0.97
6	31	0.0034	0.1	12.8	0.2	1	23	488	511	488	511	0.97
7	31	9.5e-05	0.0029	17.7	5.7	1	23	517	539	517	539	0.97
8	31	2.8e-05	0.00086	19.3	7.2	1	23	545	567	545	567	0.98
9	31	1.5e-05	0.00046	20.2	0.4	1	23	573	596	573	596	0.96
10	31	0.0041	0.13	12.5	1.4	1	23	608	630	608	630	0.93
11	31	0.00067	0.021	15.0	4.3	1	23	636	658	636	658	0.98
12	31	6.8e-06	0.00021	21.3	0.5	1	23	665	687	665	687	0.96
13	31	8.7e-06	0.00027	20.9	1.2	1	23	693	715	693	715	0.98
14	31	1.3e-06	4e-05	23.6	0.9	3	23	723	743	721	743	0.96
15	31	1.9e-05	0.00059	19.9	0.1	1	23	749	771	749	771	0.99
16	31	6.1	1.9e+02	2.5	0.6	1	23	776	799	776	799	0.93
17	31	0.00087	0.027	14.6	0.7	2	23	1046	1067	1045	1067	0.97
18	31	0.00015	0.0045	17.1	3.5	1	23	1072	1094	1072	1094	0.97
19	31	0.0012	0.037	14.2	3.4	1	23	1100	1122	1100	1122	0.97
20	31	0.0056	0.17	12.1	2.7	1	19	1128	1146	1128	1147	0.96
21	31	2e-05	0.00061	19.8	0.4	1	23	1156	1178	1156	1178	0.98
22	31	0.0099	0.3	11.3	0.1	1	23	1374	1397	1374	1397	0.97
23	31	1.5e-05	0.00047	20.2	2.9	1	23	1403	1425	1403	1425	0.98
24	31	4e-05	0.0012	18.9	4.6	1	23	1431	1453	1431	1453	0.98
25	31	2.4e-05	0.00074	19.6	3.7	1	23	1459	1482	1459	1482	0.95
26	31	0.079	2.4	8.5	0.4	1	23	1494	1516	1494	1516	0.92
27	31	0.045	1.4	9.3	6.0	1	23	1522	1544	1522	1544	0.97
28	31	6.8e-06	0.00021	21.3	0.5	1	23	1551	1573	1551	1573	0.96
29	31	8.7e-06	0.00027	20.9	1.2	1	23	1579	1601	1579	1601	0.98
30	31	2.3e-06	7e-05	22.8	0.8	3	23	1609	1629	1607	1629	0.96
31	31	1.9e-05	0.00059	19.9	0.1	1	23	1635	1657	1635	1657	0.99

Sequence Information

Coding Sequence: ATGGAACTGGAGGCAGTAAATCTAAGCCAGATTTGCCGGACATGTAAATGTGTCGCGCCCCAGATGCGGTCCCTCTTCGAAGGGTACGAAAATGCACATCAGAGTCCCCGTATTGACGAGATGCTAATGGCCTGTACTTCAGTTCAGgtGATGCTGGGAGACGGCCTGCCAGCACAAATGTGTCAGATGTGTGTGGAACAACTCAAAAACGCTTTTCTTTTCAAACGTCAATCCGAAAAAATAGATGCCAGTTTAAGGGAGTAcgcaaaaaatgttaaagttaaCGAAATAAAGCAGGAGTTGCAGAATTCCGACTTCATGGAATCCTTAAACACCTTAAACAACCTGCTAAACGAACAGTCCTCCTCTAAGGTAAACAATGCAGACACTTCGATGCCTTCCATTGCTCCCAAAATCGAGACGGACTACATCCAGTTCCTGGATAACAACCAGATGCTCCTCACGTGCCGTGAATGCGCAAAGATTTTCACTACCCTGGAAGGTCTGCGGTGCCACAAACGCATTCACACGGGAGAAATGTACAAGTGCAAGCAGTGCGACAAGGCGTACACGAGATTGAACCACCTTCAACGGCACGAGCAGTCGCATACCCGTAGGAAGGTGCACGTGTGCAGGATCTGCAGTAAGACGCTGACGCGGATGGAGCACCTCAAGAGGCACCTGGTGACGCACTTGAGGGAGAAGCCGTTTTCGTGCAATACTTGCAATAGGGGCTTTAACAGGATAGAGCATTTGCAGAACCATACGCCTAGGTGCAAAGGCGACATCGTCTACCCTTGCAACATCTGCAACAAGGCGTTCAACAGAGTAGACAGTCTCGAGGTTCACAAAACCATGCACGACAACCAGCAGCCCGAACTACCCACCATCGAAAACTTGGACAACATAGAGGACCACTACTACCAGATCGACCAAGATGCTGATGCTGTATTCTCCGATCACTCGGACATAGACGACTGTTTTGAACCCCAGGTGGAGGTGACGGAGAGCCTAGATGATGATCACATCAAAGAAGTGGCAGAAATGGGCTTACCTGATGAAGAGAGCAACGCCAGCGAAGCTTCCGTGGCGGGCGGAGACAAGGATAACGACATCGATAGCAGTTTGGATAAAACGGTGGAAAATATCGAAAACGAGGAAGGGGAAGACAACAAAGACGTGAAAGTAGAGGATAGTTTGGAAGAAGTAGAGAATTTCCCAGTGGACGACGATAATATCGCAGATGTCGTCAATGACGTCGGCGAAGACTCTTGCGACAGTGCAGACTCCGAGTACCTCCCCAAGAAACTCGTATCTCCGAAAATAAAACGCGGCCGGGGCAGGCCGCGCAAGAACCCCGATGCTCCGCCAAGACCGAGAGTGAAGGTCCCGGGCAGGGGTCGAGGTCGTCCCCCCACCAAAGGTGTCAAGAAAGAAGAAAAGGACGAGGAGTACGGTGAGTTCCCTTGCCCGGCTTGTCAGGAAATGTTCAACACGATGAGTTCGCTCGATAAACACGCCAGGATTAAACACGAGGGCTTGAAGGTGCACAAGTGCAACGTGTGCAAGAAGGAATTCAGCAGGGCCAATCACCTGAAGAGGCACGTCACCTCACATTCTAGCGTTAAGCCTTTCCGCTGTCACGTGTGTACTAAGAGTTTCAATCGAAGGGATCACTTGAATCAGCACCAGAAACTGCACGAGAGGAGTAACGATTTCGAGTGCGACATTTGCCAGAAGACGTTCAATCGAGCGGACCTTTTGGCAAAGCACAGAGCCTCAAAGCATGGCATCGGAGAAAAGATCATGGGCGAGAAGAAATATGAGTGTCCGCTGTGCCACAAGAGCTTCACGACGGAGAAATACCGAGACGTTCACGTCAACGGGCACAACGGACAGAAAGAGTACCAGTGCAGGGTGTGCGAAAAAACCTTTCTCTCGAAATCCCACCTCACCGAGCACATGAAATTCCACAACGAGCATGCCAAGAAATTTCTTTGCTCGGAGTGCGGCCAACGGTTCATCAGAAACGATTATTTGGTTATCCACATGCGTAGGCACAGGGGAGAGAAGCCGTTCAAGTGTAAATACTGCGGAAAAGgCTTTCCGAGGACGACAGATTTGACAGTACACGAACGGTACCACACTGGGGAAAAGACCCACTTGTGTACGATATGCGGAAGAGGATTTGGAAGGGCTTACAACTTGACAGTACACATGAGGACCCACACCGGAGAAAAACCGTATCAGTGCACGTACTGCGATGCGGCTTTCGCGCAAGGCAATGATCTTAAGGCTCACATCAGACGACACACGGGCGAAAGGTTCCAGTGCGAATTGTGCAGCGACAGTTTCCTCATGGGTTATCTGCTCACGCAGCACAAACGGACTGTTCATGGTTTGAATGTCGTGAGCAACATCCGACGTCTGCAGCCCGTCCACAAGCAGGAAAACCCGGACGAGCCACCTCCGATCACCATACCCCTGCCTAAGCCAGTAGTGCCGGAAAACATCATGTTCAATGCCATGCACGTCAACGCCATGCATGCGAACACGTTGCATGCGCAACTGACGGTGGCGCAGTTTCACCTTATTGGCTTGGGTTGTGACGAAAATAAATGGAGTAATTCGCAAACAAGCCCTCCCGTTGCAAAAGCGGACGAAATGGAATTGGAAACGTTAAATCTGACCCAGATTTGCCGGACATGTAAATGCGTTGCGCCCCAGATGCGATCCCTCTTCGAGGGGTACGAAAATCTGCAACAAAGTCCCCGTATTGACGAGATGCTAATGGCCTGTACTTCTGTTCAGgTAATATGTGGCGACGGTCTACCTGCCCAGATTTGTCAGGTATGTGTGGAACAACTCGAGAATGCTTTTCTATTCAAACGGCAAGCCGAAAGAATAGATGCCAGTTTAAAAGAGTACGcgaaaaatgtaaaagttaaCGAAATTAAGGAGGAACTGCAAAATTCTGATTTTATGGCgagaaacgatctttcagaatcccTAAACACTTTGAGCAACCTTCTAAATGAACAGGTCAAAGAAACCGACCAAGAACCGTCCGTCTCTCCTATCCCGAAAATCGAGACCGACTACATCCAGTTTCTGGACAACGACCAGATGTTGCTGACCTGTCGCGAATGCTCGAAAATTTTCAGCACGATAAAAGGGTTGCGGTGGCACAAACGCGTCCACACCGGCAACTTGTACAAGTGCGGTAAGTGCGACAAACAATACACGAGACTGAACCACTTGCAAAGGCACGAAGAATCGCACACGAGGAAAAAAGTGCACGTGTGCAAGATCTGCAGTAAGACACTGGTAAGGATGGAGCACCTCAAGAGGCACCTGGTGACCCACTTGAAGGAGAAACCGTTCTCTTGTACGACCTGCAACAGGGTGTTCAGCAGGGTGGAGCACCTGCACAATCATACGCCGAGGTGCAAAAGGGACATCGTTTACCCTTGCGACACCTGCAACAAGGCGTTCAACCGGGAGGATAGCCTCGAAGTGCACAAAAAAATGCACGACAACCAACCCAAGCTACCCACTATCGAAAACCTCGACAATATTGAGGAGCACTACTATCAGGTCGATCAAGACGTCGAAGCCGTATTTTCCGACTACTCCGATGTAGACGATTGTTTCGAACCCCAAGTGGAGGTGACGGAGGGCTTAGAAGACGATCATATCAAAGAAGTGGTGGAAACAGGCTTGAACGATGATGAAAGCAACGCCAGCGAGGCTTCCATGGGCGGTGgtaacgataacgataacgacAACAGCGTGGAGAAAGTAACCGAGTGCCTAGAAAATGAAGAAGTCGACGATAAGAAGGATGTGAAGGTGGAGGATGCCTTGGAGATGAAGGATGATATTATAGAGGTCGAAGATAATGCAATCGACATTGAACGTGATGCTGGGGAAAACTCCGGGGATACCACGGATTCCGAATACCTCCCCAAAAAGAGCTTATCTCCGAAAATCAAACGGGGTCGTGGCAGACCGCGCAAAAATCCCCTAAAACCCCTGAAAATTAAGGTGCCGGGCAGGGGCAGGGGCCGACCGCCCGTGAAAATCAAAAAAGAGGAGAAAGACGAGGAATACGGGGAGTTCCCTTGCCCGGCTTGTCAAGAAATATTCAACACGATGAGTGCGCTCGACAAACACGCCAGAATAAAACACGAGGGGCTGAAAGTTTACAAATGCGGCGTGTGCAAGAAGGAATTCAGCAGGGCCAATCACCTGAAGAGACACGCCACCACCCACTCCACCGTTAAGCCTTTCCGCTGTCTCGTGTGTACGAAGAGCTTCAACCGAAGGGATCATTTGAATCAACACCAGAAGTTGCACGACAAGAGCAACGCTTTCGAATGCGACATTTGCCACAGAACGTTTAGCCAGTCCGACCATCTGGCGAGGCATAAAGCCTCGAAACACGGCTTCAGAGATAAGATCATGGGCGAGAAGAAGTACGAATGTCCCCTGTGCCTTAAGAGATTCACGACTGAGAAATACCGGGACATCCACGTTAACGGCCACAACGGGCACAAGGAATACCACTGCAAGGTGTGCGAGAAATTGTTCCTGTCCAAGTCGCACCTCACCGAGCACATGAAATTCCACAACGAACATTCCAAGAAGTTCCTCTGCTCGGAGTGCGGCCAGCGGTTCATCAGGAACGATTATTTGGTTATACACATGCGCAGGCACAGGGGGGAGAAGCCGTTCAAGTGTAAATATTGCGGAAAAGgtttcCCGAGAACAACGGATTTGACGGTCCATGAAAGGTACCACACCGGTGAAAAGACCCACCTGTGCACGGTCTGTGGAAGAGGATTTGGAAGGGCCTACAATCTAACAGTACACATGAGGACCCACACTGGCGAGAAACCGTATCAGTGCACATACTGCGACGCCGCTTTCGCGCAAGGAAACGATCTTAAGGCTCACATCCGGAGGCACACGGGGGAACGCTTCCGATGCGACCTGTGTAGCGACAGCTTCCTCATGGGGTATATGCTCACCCAACACAAACGAACGGTTCATGGTCTAAATGTCATCAGTAACATTCGTCGGCTCCAACCCGTTCACAAACAGGAAAATTTCGACGAGCCTCCTCCGATAACGATTCCTTTGCCGAAGCCGGTGGTGCCGGACAACATGGTGTTCAATGCCATGCACTCGGATAGTTTGCACGCTCAACTGGCCGTGGCACAGTTTCATCTGACTAGGGAGTAG
Protein Sequence: MELEAVNLSQICRTCKCVAPQMRSLFEGYENAHQSPRIDEMLMACTSVQVMLGDGLPAQMCQMCVEQLKNAFLFKRQSEKIDASLREYAKNVKVNEIKQELQNSDFMESLNTLNNLLNEQSSSKVNNADTSMPSIAPKIETDYIQFLDNNQMLLTCRECAKIFTTLEGLRCHKRIHTGEMYKCKQCDKAYTRLNHLQRHEQSHTRRKVHVCRICSKTLTRMEHLKRHLVTHLREKPFSCNTCNRGFNRIEHLQNHTPRCKGDIVYPCNICNKAFNRVDSLEVHKTMHDNQQPELPTIENLDNIEDHYYQIDQDADAVFSDHSDIDDCFEPQVEVTESLDDDHIKEVAEMGLPDEESNASEASVAGGDKDNDIDSSLDKTVENIENEEGEDNKDVKVEDSLEEVENFPVDDDNIADVVNDVGEDSCDSADSEYLPKKLVSPKIKRGRGRPRKNPDAPPRPRVKVPGRGRGRPPTKGVKKEEKDEEYGEFPCPACQEMFNTMSSLDKHARIKHEGLKVHKCNVCKKEFSRANHLKRHVTSHSSVKPFRCHVCTKSFNRRDHLNQHQKLHERSNDFECDICQKTFNRADLLAKHRASKHGIGEKIMGEKKYECPLCHKSFTTEKYRDVHVNGHNGQKEYQCRVCEKTFLSKSHLTEHMKFHNEHAKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKYCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAYNLTVHMRTHTGEKPYQCTYCDAAFAQGNDLKAHIRRHTGERFQCELCSDSFLMGYLLTQHKRTVHGLNVVSNIRRLQPVHKQENPDEPPPITIPLPKPVVPENIMFNAMHVNAMHANTLHAQLTVAQFHLIGLGCDENKWSNSQTSPPVAKADEMELETLNLTQICRTCKCVAPQMRSLFEGYENLQQSPRIDEMLMACTSVQVICGDGLPAQICQVCVEQLENAFLFKRQAERIDASLKEYAKNVKVNEIKEELQNSDFMARNDLSESLNTLSNLLNEQVKETDQEPSVSPIPKIETDYIQFLDNDQMLLTCRECSKIFSTIKGLRWHKRVHTGNLYKCGKCDKQYTRLNHLQRHEESHTRKKVHVCKICSKTLVRMEHLKRHLVTHLKEKPFSCTTCNRVFSRVEHLHNHTPRCKRDIVYPCDTCNKAFNREDSLEVHKKMHDNQPKLPTIENLDNIEEHYYQVDQDVEAVFSDYSDVDDCFEPQVEVTEGLEDDHIKEVVETGLNDDESNASEASMGGGNDNDNDNSVEKVTECLENEEVDDKKDVKVEDALEMKDDIIEVEDNAIDIERDAGENSGDTTDSEYLPKKSLSPKIKRGRGRPRKNPLKPLKIKVPGRGRGRPPVKIKKEEKDEEYGEFPCPACQEIFNTMSALDKHARIKHEGLKVYKCGVCKKEFSRANHLKRHATTHSTVKPFRCLVCTKSFNRRDHLNQHQKLHDKSNAFECDICHRTFSQSDHLARHKASKHGFRDKIMGEKKYECPLCLKRFTTEKYRDIHVNGHNGHKEYHCKVCEKLFLSKSHLTEHMKFHNEHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKYCGKGFPRTTDLTVHERYHTGEKTHLCTVCGRGFGRAYNLTVHMRTHTGEKPYQCTYCDAAFAQGNDLKAHIRRHTGERFRCDLCSDSFLMGYMLTQHKRTVHGLNVISNIRRLQPVHKQENFDEPPPITIPLPKPVVPDNMVFNAMHSDSLHAQLAVAQFHLTRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -