Basic Information

Gene Symbol
-
Assembly
GCA_000390285.2
Location
NW:37407-40974[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00033 0.26 11.1 1.2 1 46 84 143 84 143 0.89
2 4 0.013 11 6.0 0.9 1 30 210 249 210 269 0.68
3 4 5.8e-06 0.0047 16.7 0.3 3 46 339 396 337 396 0.87
4 4 4.6e-05 0.037 13.8 1.6 2 45 482 538 481 539 0.90

Sequence Information

Coding Sequence
atggaaCCCTTGGAAATATACGATGCGattaataacaaagttataCGTGTATATGTGTCTACGGATGTAGCTGAAAAATGTCGCACAGATACTGAATTTGCCcaagatttatttaataaattgcaaGACCAGGATATAGAAGAAGGCTGTGCAGTGGAAATTGAAACAATAAAGTCCGAAGTGAACGAAGAAGGTGAACCTGCGGAAGGTGATGAATATGAATCCCCCCTTGATgagaaaataaatgataaagaGGTTTGGAGTAGACAcgaaacattaaaattaataaagatttATCAGCGGTATAAAGATACGTTTAAAGAACATAAACAAAGAAGAGTAGTTTGGGCCATGATAGCTGCTGAATTGTCACAGTATAATGTTTTCAAATCGGCAGCAAAATGTgctgaaaaatggaaaaatttattaagaacGTATAAGGTTGCAAATGAGAAACCAAACGTACCAACAAGATTCCAATATTATCAAGAAATGAaggatatatttaataatacagaAGTTTCCATATCTGATAGTGAAACGGATGAAAAGGAAGTAAAGTATACCCCATTGTCCTCGGCAGAAGTTGCAGAACTGAAGGATAGTTTTACAGAAGAAGTTCCGGAAAAAGAATCCTGGTCAAGATATGAAactcttaaatttttaaaagcttTTCAAATGTTGAAGCacatgaaacaaaatttttcaaaagaaaaacatttttggtcAATGGTTTCTGCACAACTTGCAAAAGATAATATACATAAACATCATGAGAAATGCTCGGCTAAGTGGAAGAACCTTCTGCGCAGCTATaggaaaaatttagaaaagccTAGTATGCCCACAAGATTCCAGTATTTTCAGGAAATGAACGATGTGTTGAATGATACCGAATTAGAAATTGCTGATCATATTATGCGCATTACAGATGATGTTGAAAAGATTGTAGACCCCGACCAATTCAAAACTATCTTGGAAGAGGCCGAACTAGAAACTTCTAAAGATCCCGTCTCGTGGGCGGCAGACGAGACGTTGAAACTTATCGAGgcctataaaaaacataaaaccaAGTTTAATAAATGTccctcaaaaaaatttgtctGGGCTGTTATATCATCAGAACTCGCCAATCAAGGTATCTACCGTGAcacagaaaaaattgaaaacaaatggAAAAGCCTTCTGCGTTCGTACAGAAGGGGCGAACTTAAAGGAGAAAATCCGAGGTTTTACTTTTATGAAGAGATGTCTGAAGCACTAAACGATCAAAATGTTACCACTACAAAAAACGAGGAAAACGGCACAGAATATTTAGCCGAGGATAACTCTATGGATAATACGGAAATGGTAATCGAAAACTCGGACCATGCATATAGCGAAAATGCtggatatgaacaaataatcaTCCAAACTGAGCCAGATGAGACTGAAGATAATGAAAACCATTGGTCTTACAGCGAGACGTCAGCCTTACTATCAGCTTAcgcaaattataagaaaaaattcaaaaacggAAGGAAATCGAAGCTGTGGGAAGAAGTTACGAAGGAACTAAAGTCTGTCGGTATACATAAATCCGCAGAAAGTTGCGAGAAGAAGTGGAAGAAGATGTTTAGTGTGTACAAGATTCATAAACTGAATAAAACCGGACCTGGCCGATTCCAGTTCTATCAAGAGATCGATGACATTCTGAAAGAGGAGTTAGGAGGTGGCGACGGTGATGATGAACCTGTTGGTCCTAATAAAAGATGTAAATGCAGCGAGAAAAGGATGGTAGAGAAGCAGAATAGACACATAGAGCGAATGCAGATGTTGAAAAGGAAGCTGGATTTGGAAGAAAGGAAAGTTGAGGCCTTCGAACTATACGTGAAACACTTTAAAAGTACTAATAGTAGCGGTAGAAGTTAG
Protein Sequence
MEPLEIYDAINNKVIRVYVSTDVAEKCRTDTEFAQDLFNKLQDQDIEEGCAVEIETIKSEVNEEGEPAEGDEYESPLDEKINDKEVWSRHETLKLIKIYQRYKDTFKEHKQRRVVWAMIAAELSQYNVFKSAAKCAEKWKNLLRTYKVANEKPNVPTRFQYYQEMKDIFNNTEVSISDSETDEKEVKYTPLSSAEVAELKDSFTEEVPEKESWSRYETLKFLKAFQMLKHMKQNFSKEKHFWSMVSAQLAKDNIHKHHEKCSAKWKNLLRSYRKNLEKPSMPTRFQYFQEMNDVLNDTELEIADHIMRITDDVEKIVDPDQFKTILEEAELETSKDPVSWAADETLKLIEAYKKHKTKFNKCPSKKFVWAVISSELANQGIYRDTEKIENKWKSLLRSYRRGELKGENPRFYFYEEMSEALNDQNVTTTKNEENGTEYLAEDNSMDNTEMVIENSDHAYSENAGYEQIIIQTEPDETEDNENHWSYSETSALLSAYANYKKKFKNGRKSKLWEEVTKELKSVGIHKSAESCEKKWKKMFSVYKIHKLNKTGPGRFQFYQEIDDILKEELGGGDGDDEPVGPNKRCKCSEKRMVEKQNRHIERMQMLKRKLDLEERKVEAFELYVKHFKSTNSSGRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01014397;
90% Identity
-
80% Identity
-