Agla001185.1
Basic Information
- Insect
- Anoplophora glabripennis
- Gene Symbol
- -
- Assembly
- GCA_000390285.2
- Location
- NW:9285-10818[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-08 8.1e-06 25.2 0.1 1 36 18 53 18 59 0.95 2 2 8.1 4.5e+03 -2.8 0.0 12 22 136 147 134 147 0.75
Sequence Information
- Coding Sequence
- atgccACGGAAATATCAAAGAAAGGCAAGTGCACGCACAAGGGCCTTGTGGACCGAAGAACAATTGCAAGAAGCCATTAATAAAGTTAGTTCCGGTGAGGTATCCAAAAGAGAAGCTCATAGGCGTTATCAGGTATCACCAAAGACCCTTAAACGTAGAATGGCTAGTGTTCGGAAAGGGAGTCTCGGACCAGAAggtGTTCTAGGGCATGAAAATGAAAAACGGTGGGTTGTTCACATCCAACGATTGGCAGCGGCTGGATTTGCTCCTGATAGAAATACAGTTCGACGATTGGCTTACAACTTTGTTgagaaactaaaattaaaacacattttttcagACAATAGCGGCATGGCTGGTTATTCTTGGCTTTCATCATTTTTGGAAAGGAACCCCGAATTTTCTATAAGGCAAACTGAAGAATTGTCATTATCAAGAGCTCGAGGAATGAACAGAGAAGAAACCTCAccattttttcaacttttgatTGATACCTTAACTGAATATTGTGAATATAGTATATTGGACAAACTGTCTCATATTTTCAATATGGATGAGACAGGTGTACAACTGATCAACAAACCTGGCAAAGTCCTAGCAACGAAAAGTGCAAAAGATGTATACGTTTTAACATCTAAAGAGCGAGGAGAAAATGTTACTGTTGTTGCATGTTGTGGTGCAGACGGCAGGTTTATTCCGCCCACATTAATTTTCAAAGGTGTAAACCAAAAGGCTGAATATTCAGATGGATTACCAGCTGAATCCAAagtttatatgaataaaaattcatCCTTCATAAACTCGGAATTACTTCTTAAATGGTTAAAAGAGCAGTTTATTCCGAATAAACCACCCGGTAAATGTTTATTAATCCTGGATGCCCACACTTCACACAGTACTGATGGCGATATGCTGCAAGTGGCTGACAACGATATCGTTATTTTGTGTTTACCAAGTCACTGTACGCAGGCTCTTCAGCCACTAGACCGGAGCTTTTTTAAGCCATTTAAAACTTATTTGAACCAAGAAGCTCAGTTATGGATGAAACACAACGCCAGCAGAAACCTCACGAGATATCAAGCTGGTTCATTAATTGGAAAAGCTTGGTTAAGATCAGCATCTGTGGCCACAGCCATTAACGGTTTCAAGGCAGCAGGGATATATCCTGTTGATCCAAATGCAATTCCGGATCACTTTTATTCGATAATCGATTCAGCCACGGCTACGACAGAAACTTCCCCAGAAAGAGATGCTGTCCGTTCCAGCTTAGAATTACCCTCCACAAGCCCTGCAAGTCCTATTCCAACATGTAGTGGTGGAGACGACGGCGACGGTCCAAAAATCACTccttcaaaatttttgcaaGAAGTGTCTGTCCCAAAAATACCTGTATCCGTTAAACAGAGGTACAAGCAAAGCGCAACTGTGTTAACATCAtccgaaaacataaaaacaaagaGGGTTCGCTCACAAACCTAA
- Protein Sequence
- MPRKYQRKASARTRALWTEEQLQEAINKVSSGEVSKREAHRRYQVSPKTLKRRMASVRKGSLGPEGVLGHENEKRWVVHIQRLAAAGFAPDRNTVRRLAYNFVEKLKLKHIFSDNSGMAGYSWLSSFLERNPEFSIRQTEELSLSRARGMNREETSPFFQLLIDTLTEYCEYSILDKLSHIFNMDETGVQLINKPGKVLATKSAKDVYVLTSKERGENVTVVACCGADGRFIPPTLIFKGVNQKAEYSDGLPAESKVYMNKNSSFINSELLLKWLKEQFIPNKPPGKCLLILDAHTSHSTDGDMLQVADNDIVILCLPSHCTQALQPLDRSFFKPFKTYLNQEAQLWMKHNASRNLTRYQAGSLIGKAWLRSASVATAINGFKAAGIYPVDPNAIPDHFYSIIDSATATTETSPERDAVRSSLELPSTSPASPIPTCSGGDDGDGPKITPSKFLQEVSVPKIPVSVKQRYKQSATVLTSSENIKTKRVRSQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -