Agla014326.1
Basic Information
- Insect
- Anoplophora glabripennis
- Gene Symbol
- -
- Assembly
- GCA_000390285.2
- Location
- NW:9509-26094[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1 1.7e+03 -1.5 0.1 28 39 65 77 64 80 0.72 2 2 5.3e-10 3e-07 29.8 0.0 3 39 86 122 84 127 0.90
Sequence Information
- Coding Sequence
- ATGATGAGGTTAGCAGTCGCTCTCCATGAACGACTAAGTACTACTTTGGGATATTTAGCAACAGGAAGAGACTATGAAGATTTAAAATTCTCAACTCGTATCTCTGCTCAAGCCCTGGGAAGAATAATACCAGAATCTCTCGGCCTGTACTCACACCTCAGTCATACATGTTCTGACTTGTATGCGAAAAGCATAGCCGGAAGTACAATAGTTcgcaaatataaaaagaaaacatcgAGGGGAGAGTGGTCCAAAGAAAGTATGAAACAGACCGTTGAAAAAGTCTTAAACAAAGAAATGGGTTACCGCAAAGCGGCATTGCAATATTCAGTGCCACAAACAACGTTGGAAAGACACGTCAATGCGATTAAAACCAAAGGTGAAATGAACTTAGATTTACCGTTAGGGCCAATTACAACAGTGTTCagtaaaaaagaagaaaatgaattagtcgaatatttgaaagaaatgGAAGCAAGGTTATTCGGACTTAGTACGCTGGAGCTGAGAAGTTTGGCCTATCAATTGGCCGTCAAAAATGATAAATATAAGTTAGGGCCTGATAGGATTTACAGCTGTGATGAAACAGGCATCTCATCGGTTTCTAAAACAAAATCCAAGATAATTTCACGCAGGGGTAGGAAGCAAGTGGGATCATTATCGTCAGCTGAACGAGGACAAACAGTTACCGTCGAAATTTGTGTTAGCGCTGCAGGAAGCTATATGCCGCCAATGCTAATCTTCCCTCGCAAGCGCATGAAAGCTCAATTATTAAACAACTCGGCACGAGGAACAACTTCCCATTGTAATGCCAGCGGATGGATGACTACAGACGTATTTGTCTCTTGGTTCAAAAGTTTCATTCAATTCAGTAGAGCAAGCAAAGACAACCCTGTGCTGCTTTTACTCGACGGTCACGCTACTCACACCAAGAACATCGAGCTTATAGACGTTGCTAGAGAAAACGGCGTGGTTATAATCTGCTTCCCCCCTCACTGCACACATAGGCTTCAGCCACTAGATGTTTCTTTTATGAAGCCCCATCCACTGAAGGATGGGTTGCATGTCAG
- Protein Sequence
- MMRLAVALHERLSTTLGYLATGRDYEDLKFSTRISAQALGRIIPESLGLYSHLSHTCSDLYAKSIAGSTIVRKYKKKTSRGEWSKESMKQTVEKVLNKEMGYRKAALQYSVPQTTLERHVNAIKTKGEMNLDLPLGPITTVFSKKEENELVEYLKEMEARLFGLSTLELRSLAYQLAVKNDKYKLGPDRIYSCDETGISSVSKTKSKIISRRGRKQVGSLSSAERGQTVTVEICVSAAGSYMPPMLIFPRKRMKAQLLNNSARGTTSHCNASGWMTTDVFVSWFKSFIQFSRASKDNPVLLLLDGHATHTKNIELIDVARENGVVIICFPPHCTHRLQPLDVSFMKPHPLKDGLHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00110464;
- 90% Identity
- iTF_00110464;
- 80% Identity
- -