Agla013594.1
Basic Information
- Insect
- Anoplophora glabripennis
- Gene Symbol
- -
- Assembly
- GCA_000390285.2
- Location
- NW:139641-141660[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-11 3.5e-08 32.7 0.0 3 39 13 49 11 52 0.94 2 2 1 5.6e+02 0.1 0.0 9 19 526 536 526 537 0.89
Sequence Information
- Coding Sequence
- ATGCCAAACCAACGTAAAAGGAAGAACTGGGATGCCGAAAATATGATTGCAGCCATAAAAGCCTGTAGAAGTAAAACCATGGGTTACAAAAAAAGTGCTAAAACACACGGAGTACCACAAACGACGTTGGAAAGATTTGTTAAGATGAACGGGGATCCTGAAGTTGTAGTCCAAACCAAACTGGGTAAGAAACCAGTGTTTTCTCCAGAAATGGAAGATCATCTTTCCACACACTGCTTGCAaatggaacaaaaatattttggaataaccAAAAAAGATATTTGCAGAATGGCATTTGCTTTgtgcaaagaaaataaaataaaaaatcctttcaaCAATGTAAAAGAGTGTGCAGGCTCTAAATGGTTCAAATGTTTTCTTCGGCGTCATCCAGAGCTCTCCCTAAGGACCCCTCAAGGAATTTCATACGCAAGAATAAAATCATTTACTCCGGATAACGTTTCCAAGTATTTTGATTTATATGAACCACAAATGGATAAAATTCAACATAATCCATCCAGAATATATAACTGCGATGAATCTGGGATATCAGTTGTCCAACATAAGCATATTAAAGTGATAGTTAGgaaggaaaaaaaacaaataggaGCCATAACATCCGCAGAACAAGGATCTACTATAACTgtggttttttgttttaatgcCACAGGACAATATGTGCCACCATTGATAATATTCCCCAGGAAAAATATGAAGATTGAATTGATGAATGGTGCCCCGCCAGGTTCAATATACGCATGTCATCAGTCAGGCTGGATTCAACAGGAAATATTTGTTCAGTGGCTGCACCATTTCATTGAATTCACCAAGCCAACCAAAGAAGATCCTGTTATCCTTATTTTGGACGGCCATTATTCGCATACTAAGAATTTGGAGGTAGTTAATGTTGCAAGAGCCCATCATGTTGTAATAATTTGCCTGCCACCCCATTCTACCCATAAGATGCAGCCGTTAGATGTTGCATTTATGTCACCATTCAAAACATACTATGCACAGGAAATATCTCAATGGCTGAAGCAACATCCTGGTCGTGTGGTGACAGTTTACCAAGTCGCGGAGCTATTTGGCATGGCATATAATAGAGCAGCCACTGTGGAAACGGCAGTTAATGGGTTTAGAAAGACAGGAATGTTTCCAGTAAACCGAAATATTTTCCGAGATTACGATTTTGCTGAcaacattttaaatgaaaatacaaaGGAAAATATTGGTGATATGGTGAATGATGGTGATATAGGGAATGCTGGTCATACGGTGAATGATGGTGCTATGAAAGGAATACCTAAAGATGATTCAATATCGAGCATCTCGACAGCAAATACTTCGGATGGTGTTCTTTCTGCTAGGTCAAAATTAGTTGCAGATCATGCCATTCCAAGCACTTCAAAGTGTAATTCTGAGGAGATTCTCCACATCACTCCTCCCAAAACTCTTACTGAAAGACTGATTTTACCCAGCAACATATTGcctattccaaatttgagcaGCAAGATCGATGAACAGAAAAAATCCAGAGGTGGCAAGATGATAAAAGTGGAGATGAGTGGGTTCAGTGTCAAGGATGTTTGGAATGGGCCCATGTCCACTGTGCTGGAAANCTATGTCTTTCCAAAGTTTCACTTGAGGGtacaaaaatgtgataaaacagtACACCAAGAAAAGTTTTCCGTATACGTCCCAAAAAAGACCTTTCTAGGGGAAGATTCTTGA
- Protein Sequence
- MPNQRKRKNWDAENMIAAIKACRSKTMGYKKSAKTHGVPQTTLERFVKMNGDPEVVVQTKLGKKPVFSPEMEDHLSTHCLQMEQKYFGITKKDICRMAFALCKENKIKNPFNNVKECAGSKWFKCFLRRHPELSLRTPQGISYARIKSFTPDNVSKYFDLYEPQMDKIQHNPSRIYNCDESGISVVQHKHIKVIVRKEKKQIGAITSAEQGSTITVVFCFNATGQYVPPLIIFPRKNMKIELMNGAPPGSIYACHQSGWIQQEIFVQWLHHFIEFTKPTKEDPVILILDGHYSHTKNLEVVNVARAHHVVIICLPPHSTHKMQPLDVAFMSPFKTYYAQEISQWLKQHPGRVVTVYQVAELFGMAYNRAATVETAVNGFRKTGMFPVNRNIFRDYDFADNILNENTKENIGDMVNDGDIGNAGHTVNDGAMKGIPKDDSISSISTANTSDGVLSARSKLVADHAIPSTSKCNSEEILHITPPKTLTERLILPSNILPIPNLSSKIDEQKKSRGGKMIKVEMSGFSVKDVWNGPMSTVLEXYVFPKFHLRVQKCDKTVHQEKFSVYVPKKTFLGEDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00846365;
- 90% Identity
- -
- 80% Identity
- -