Agla009898.1
Basic Information
- Insect
- Anoplophora glabripennis
- Gene Symbol
- Runx1
- Assembly
- GCA_000390285.2
- Location
- NW:801032-910411[-]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-74 2.7e-70 233.6 0.0 2 129 51 178 50 178 0.98
Sequence Information
- Coding Sequence
- ATGTTTGGTGATTGGGTACCGACAACGATGCACCTTACCAACACACCCTCAGGTGCCACCGGTACCGCTTCCTCCCCAGAGGGTACCACCAGCTTGATCCAAGACACCTACACCAAAATGACCTCCGACATCCTCGCGGAAAGGACACTCAATGACTTCCTAAGTGAACATCCTGGTGAATTAATTAGGACTGGGAGCCCCCTTTTTGTGTGCACGGTTTTACCTCCACATTGGAGGTCCAACAAGACCCTTCCCGTGGCTTTTAAGGTGGTCGCACTGGGGGACATCGGGGATGGGACTGTAGTGACTGTTAGGGCGGGAAACGATGAAAATTATTGTGCGGAGTTGAGGAACTGTACGGCTGTTATGAAAAACCAAGTAGCTAAATTTAATGACCTTAGGTTCGTGGGAAGAAGCGGAAGAGGGAAGAGTTTCACCCTGACGATAATGGTGTCTACTAGTCCGCCCCAGATTGCCACATACAATAAAGCTATTAAAGTTACTGTAGATGGTCCTAGGGAACCAAGGTCCAAAACAATGCTCTCTCTTCTAGGACAGCAGCAACAGTTCCATTTTGCCTTTGGCCAGCGGCCGTTCCCTTTTGCAGCCTCTGACCCCTTATCAGGCTTTAGAATGCCACCCATAGGAAATTGTAACAATATGCCTCAATTCGGTTTAAGTAGTGCAAACTCCCACTGGGGGTACGGAGCAGCAGGAGCATACTCACCCTATTTCACATCGAGTACGCTGGGGTCTTGTGCAGCACCCACCTCGCAATTCAATACTCCCGCCCTTGGATTCTCTGGAAGCGCTCCAGATCAGTCATCTACACAAGATGCCTTTAGCACTAGCTCTGCCGTGAGTTCCTTACTCCCGGAAGCAGCTTCCACAGATCTGGATCAACACCTAGGTCTAGTTTCTTCCCAAAATCATTCAAACCACTCCCAAACAGTCGCTCATACGTCGTCACTTTTAGTTCCTCGATACTCTTCTAATCATACTGATTTTGCTCTTTCCGGTCCAAGGTCGTTATCAGATAATTCAAGTGCTGCGGAAAGTCCTGTCCAGGACGACCTGTTGTCTTCACAAACATCATTGGGTGTTAATCACGTCAACAATTCTAATTTTCCGTTGCATCAAAACATGCCTCAAAGTTCATATGCATCCAGCAACTGCAACAATTCCATTTATCCAGTACTTCCCGGCTTGCTTTATTCTCAATTGTATTCAGCTGCTAACCAAACCCATAATTTTCATTCTCTGCATTCGCATACGACCCATGCTCAACATAACGACTTGCAAAGCGTCATGGATCACATTTCTACTAGTAACCAGAGGCAAATGGTGAATGGGAGCACAGATTTGCTTCTGACCAACAATGGCACTTGTGCAGCTGCAGCTGCACGGCAGGATGACGGTCACAGTCGCGGTCTGAGCACGAATGGAGCTCAACGAGGACCAGGGCAGAATGGGGATGCAGTGGTTTGGAGGccctattaa
- Protein Sequence
- MFGDWVPTTMHLTNTPSGATGTASSPEGTTSLIQDTYTKMTSDILAERTLNDFLSEHPGELIRTGSPLFVCTVLPPHWRSNKTLPVAFKVVALGDIGDGTVVTVRAGNDENYCAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTIMVSTSPPQIATYNKAIKVTVDGPREPRSKTMLSLLGQQQQFHFAFGQRPFPFAASDPLSGFRMPPIGNCNNMPQFGLSSANSHWGYGAAGAYSPYFTSSTLGSCAAPTSQFNTPALGFSGSAPDQSSTQDAFSTSSAVSSLLPEAASTDLDQHLGLVSSQNHSNHSQTVAHTSSLLVPRYSSNHTDFALSGPRSLSDNSSAAESPVQDDLLSSQTSLGVNHVNNSNFPLHQNMPQSSYASSNCNNSIYPVLPGLLYSQLYSAANQTHNFHSLHSHTTHAQHNDLQSVMDHISTSNQRQMVNGSTDLLLTNNGTCAAAAARQDDGHSRGLSTNGAQRGPGQNGDAVVWRPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01409727; iTF_01351425; iTF_00270823; iTF_00949572; iTF_00927278; iTF_01291246; iTF_00269526; iTF_00398613; iTF_00788299; iTF_00950493; iTF_00853726; iTF_01186793; iTF_01121354; iTF_01229519; iTF_01344688; iTF_00395028; iTF_00431261;
- 90% Identity
- -
- 80% Identity
- -